Genomic Feature
rw95
Notes
No data available
Variants
- Variant Type
- Point Mutation
- Variant Location
- Chr 20: 17803604 (GRCz11) (1) Details
- Nucleotide change
- A/G
- Variant Notes
- None
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- A>G (1)
- Transcript Consequence
- Missense (1)
- Protein Consequence
- Amino Acid Substitution: Tyr>Cys at position 558 (1)
- Flanking Sequence
-
ACTATTTACAGTTTACAAAAATAAAACTAATATGAAATAGTGTTGTCAGGCGATCAAATTATTTTAAAGGTTTTATTTAACAAAGGATTTCCTGTTATAATTATAGACAGATTATTATTGATAAAGTGCATTTTTATAGCACTTAATAATGTTTTTTTTTTTTATTTGTTTGCACCTTTATATTTATATAATATATGTTAAATATAAATGTTAAATGTAAATTCTTAACGCACTGTTCGTTTCATTTTGACAAATATTCTATACAGTCTAAACACAACAGAAGTAGTAGACTAATTTAAAAATTGGCTACTCCACATATAACCATTGTGAAAATGTAAACGAAATGAAAACGTTAACCACATCTTCTTGTGTGTTTGTGTTTTAAAGTTACTCTAAATTATACGACCCCGCCAACTGGTTGGAGATCGACCCAAACAACGGACGAATTTCCACCATTGCTGTTTTGGATCGAGAATCTCCTTACGTGAAAAATAACCTTT
A/G CAACGCCACATTCATGGCTTCAGACAATGGTAAGAGCAATGTTGTGTGTGTCTGTGTGTGTGTGTGTGTGTATGCATAAGCAGTTAAGATTGAGTGATTGAGTGATTCCATTGATTTTAGCTCTAGGGTGGAACTGCAACCGAACAGACTCAGAAATATACCCATGCCCACACATCCATGCTTAATGATCACACCAATGACAAATGCAAACTCATTCCCAACGTCTGCGTGTTCACTTTCCCTGGGTGGCTCTTTGAAGCAGCTCTTCTTTCTAACACACACATATGCACATACACTACCCGCTGTGTGAAAGAGTCTACAGAAGTCTGCTAGGCCGCTATTCTGCTGCCGTGTTTAACATTCTTGCTGCATCAGAGCTGTGAAACAACCCCCCTCTCTCACACACACACACACACACGCTGTAAATTTGAAAGCTTGTCTCCAGAAACACTCACAAAGCAGTTGTGCCGTTTTCGTATACGGTATTCCAGCACAAAACC - Additional Sequence
- None
Fish
| Fish | Genomic Feature Zygosity | Parental Zygosity | Affected Genomic Regions | Phenotype | Gene Expression |
|---|---|---|---|---|---|
| cdh2rw95/rw95 | Homozygous | Unknown | Fig. for (rw95) from Phenotype Annotation (1994-2006) | text only from Masai et al., 2003 |
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Supplemental Information
- Genotyping protocol
- None
- Tsujikawa, M., and Malicki, J. (2004) Genetics of photoreceptor development and function in zebrafish. The International journal of developmental biology. 48(8-9):925-934
- Masai, I., Lele, Z., Yamaguchi, M., Komori, A., Nakata, A., Nishiwaki, Y., Wada, H., Tanaka, H., Nojima, Y., Hammerschmidt, M., Wilson, S.W., and Okamoto, H. (2003) N-cadherin mediates retinal lamination, maintenance of forebrain compartments and patterning of retinal neurites. Development (Cambridge, England). 130(11):2479-2494
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