| ZFIN ID: ZDB-EXP-260121-7 |
Experiment Conditions Description: bacterial treatment by injection: Mycobacterium marinum M, chemical treatment by injection: Recombinant Tumor Necrosis Factor TNF alpha (Zebrafish), chemical treatment by environment: nigericin
| bacterial treatment by injection: Mycobacterium marinum M |
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| Name: | bacterial treatment by injection |
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| Synonyms: | |
| Definition: | Bacterial treatment where the bacteria are injected into the fish. |
| Ontology: | Zebrafish Environment Condition Ontology [ZECO:0000230] |
| Name: | Mycobacterium marinum M |
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| Synonyms: | Mycobacterium marinum str. M, Mycobacterium marinum strain M |
| Definition: | |
| Ontology: | Taxonomy for ZECO [NCBITaxon:216594] |
| chemical treatment by injection: Recombinant Tumor Necrosis Factor TNF alpha (Zebrafish) |
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| Name: | chemical treatment by injection |
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| Synonyms: | |
| Definition: | Chemical treatment in which the chemical is injected into the zebrafish. |
| Ontology: | Zebrafish Environment Condition Ontology [ZECO:0000237] |
| Name: | Recombinant Tumor Necrosis Factor TNF alpha (Zebrafish) |
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| Synonyms: | TNF-a, TNFalpha |
| Definition: | Tumor necrosis factor alpha is a member of the TNF Superfamily. It is produced chiefly by activated macrophages, but it is produced also by a broad variety of cell types including lymphoid cells, mast cells, endothelial cells, cardiac myocytes, adipose tissue, fibroblasts, and neuronal tissue. Protein Sequence:AAIHLTGGYN SESKTLDWRD DQDQAFSSGG LKLVNREIII PDDGIYFVYS QVSLHISCTS ELTEEQVLMS HAVMRFSESY GGKKPLFSAI RSICTQEPES ENLWYNTIYL GAAFHLREGD RLGTDTTTAL LPMVENDNGK TFFGVFGL |
| Ontology: | ChEBI [CHEBI:197439] ( EBI ) |
| chemical treatment by environment: nigericin |
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| Name: | chemical treatment by environment |
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| Synonyms: | |
| Definition: | Chemical treatment condition in which the chemical is introduced through the environment. For zebrafish this is the tank water. |
| Ontology: | Zebrafish Environment Condition Ontology [ZECO:0000238] |
| Name: | nigericin |
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| Synonyms: | (2R)-2-[(2R,3S,6R)-6-{[(2S,4R,5R,7R,9R,10R)-2-{(2S,2'R,3'S,5R,5'R)-5'-[(2S,3S,5R,6R)-6-hydroxy-6-(hydroxymethyl)-3,5-dimethyltetrahydro-2H-pyran-2-yl]-2,3'-dimethyloctahydro-2,2'-bifuran-5-yl}-9-methoxy-2,4,10-trimethyl-1,6-dioxaspiro[4.5]dec-7-yl]methyl}, Azalomycin M, Helixin C, Polyetherin A |
| Definition: | A polyether antibiotic which affects ion transport and ATPase activity in mitochondria. It is produced by Streptomyces hygroscopicus. |
| Ontology: | ChEBI [CHEBI:7569] ( EBI ) |
| Publication: | Roca et al., 2022 |
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