Transcript

atg13-203

ID

ZDB-TSCRIPT-160623-660

Name

atg13-203 Nomenclature History

Previous Names

atg13-004

Transcript Type

aberrant processed transcript

Annotation Status

nonsense mediated decay

Annotation Method

Ensembl

Associated With Genes

atg13 (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000173462 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|ENSDART00000173462.2|gene_biotype:protein_coding|ENSDARG00000036040.6 transcript_biotype:nonsense_mediated_decay gene_symbol:atg13 cdna chromosome:GRCz11:7:38804123:38807825:-1
CAAACAAGCAAAATAAACAAAAATGGAGCGCCCGTCAGTT
TGTGACGTTGCGGTGCTAATATGTGATTAACTGAGGATAC
AGGACAGTTTAAGCTGTATTTTTTCTTTTCACATAATCAG
CTACGGTGTATTGCACCGTTAACGTCATATTCTACGTGTT
AACAGTTGAATCTGCACTCTGTGATGAGCTGCTCGTGCGA
CAATGGATAGTGATCTGAGCCCACAGGACAAGAAAGACTT
AGATAAATTCATCAAATTCTTTGCTTTGAAGACAGTGCAG
GTTATAGTGCAAGCCCGGCTTGGAGAGAAGATCAGCACTT
GCTCGTCTTCATCACCGACAGGTTCGGACTGGTTTAATTT
GGCAATAAAGGACATCCCCGAGGTCACTCATGAAGCAAAA
AAAGCTCTTGCTGGACAACTGCCTGGCATCGGGCGATCTA
TGTGTGTGGAGATCTCCCTCAAAACCTCAGAGGTGTGATA
AGGACATTAAAGTGTCCTATACAGTTTATAATCGACTGTC
TCTGCTGCTCAAGTCTTTACTGGCCATCACAAGGGTGACT
CCTGCTTACAAGCTTTCACGTCAACAAGGCCATGATTATG
TAATACTCTACAGGATCTATTTTGGAGATGTGCAACTGAC
AGGTCTTGGGGAAGGCTTTCAGACAGTGCGAGTGGGTATT
GTTGGCACTCCCATTGGCACCATCACTTTGTCTTGTGCAT
ATCGCACTAATTTGGCTCTTGTGTCTTCAAGACAATTTGA
GAGAACAGGCCCTATCATGGGTATTATCATTGATCATTTT
GTGGAGCGTCCCTTCACTAATATGGCACACACACATCCCT
GCAGCTAC

OTTDART00000063882 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000063882.1|ZDB-TSCRIPT-160623-660 cdna: chromosome:VEGA67:7:38532865:38536567:-1 gene:OTTDARG00000020219.4 gene_biotype:protein_coding transcript_biotype:nonsense_mediated_decay gene_symbol:atg13 description:ATG13 autophagy related 13 homolog (S. cerevisiae)
CAAACAAGCAAAATAAACAAAAATGGAGCGCCCGTCAGTT
TGTGACGTTGCGGTGCTAATATGTGATTAACTGAGGATAC
AGGACAGTTTAAGCTGTATTTTTTCTTTTCACATAATCAG
CTACGGTGTATTGCACCGTTAACGTCATATTCTACGTGTT
AACAGTTGAATCTGCACTCTGTGATGAGCTGCTCGTGCGA
CAATGGATAGTGATCTGAGCCCACAGGACAAGAAAGACTT
AGATAAATTCATCAAATTCTTTGCTTTGAAGACAGTGCAG
GTTATAGTGCAAGCCCGGCTTGGAGAGAAGATCAGCACTT
GCTCGTCTTCATCACCGACAGGTTCGGACTGGTTTAATTT
GGCAATAAAGGACATCCCCGAGGTCACTCATGAAGCAAAA
AAAGCTCTTGCTGGACAACTGCCTGGCATCGGGCGATCTA
TGTGTGTGGAGATCTCCCTCAAAACCTCAGAGGTGTGATA
AGGACATTAAAGTGTCCTATACAGTTTATAATCGACTGTC
TCTGCTGCTCAAGTCTTTACTGGCCATCACAAGGGTGACT
CCTGCTTACAAGCTTTCACGTCAACAAGGCCATGATTATG
TAATACTCTACAGGATCTATTTTGGAGATGTGCAACTGAC
AGGTCTTGGGGAAGGCTTTCAGACAGTGCGAGTGGGTATT
GTTGGCACTCCCATTGGCACCATCACTTTGTCTTGTGCAT
ATCGCACTAATTTGGCTCTTGTGTCTTCAAGACAATTTGA
GAGAACAGGCCCTATCATGGGTATTATCATTGATCATTTT
GTGGAGCGTCCCTTCACTAATATGGCACACACACATCCCT
GCAGCTAC

Related Transcripts

Transcripts related to atg13

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	atg13-203	Ensembl	848 nt
mRNA	atg13-201 (1) Ensembl	Ensembl	2,463 nt	Select Tool
mRNA	atg13-202 (1) Ensembl	Ensembl	755 nt	Select Tool
mRNA	atg13-204 (1) Ensembl	Ensembl	822 nt	Select Tool

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations