Transcript

itfg1-202

ID

ZDB-TSCRIPT-160623-447

Name

itfg1-202 Nomenclature History

Previous Names

itfg1-004

Transcript Type

mRNA

Annotation Status

Annotation Method

Ensembl

Associated With Genes

itfg1 (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000173996 (1) [ Show ]

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>tpe|ENSDART00000173996.2|gene_biotype:protein_coding|ENSDARG00000110264.1 transcript_biotype:protein_coding cdna scaffold:GRCz11:ALT_CTG7_1_35:2599:205381:-1
ATGGATGTGCTTCTCACTGGCCACTTAAATGGCTCCCCTT
TACAAACAAGCGTCTTCGTCTTCTGGGGACGTAACCAGAC
TTTAGATATTTTTGGAACTGTGGATGATTATCTTCCTAAA
TGTCCTATAGCTTGTTTTAAGGCTCTCAACTCCACAGTTG
CAATGCGCATCCCTCATTCCCATGCTTTCATCGACCTTAA
CAAGGACTTCACTGCTGGTGATTGTTCTGCCTTTCTTTTT
TTAATTCTGTTAAATCTTTTTGTTAAATTCTGTTTTTTAA
AGGATGGGAACTTCACCAAAGCCCCGTCTGGACCTTCTCT
GGAGAATGTGAAGAGAGTGGGTCAATCTGCATTCGTAGAC
TTCGACGGTGATGGCTTCCAGGACCACCTGTTGCCGGTGT
GTATGGACGATGCGTGTGCTAAAAGTGCAATATACCTGGC
CAGGCCTGGGGGGACAAAGTGGGTGCCTGTGTTGATGGAC
TTCAAGAGGAAGGATTCTGTGTGGGGTTTTGTGCCCGCTC
CAGAAAAGCCCACTTCGGAAGAACTGCGAATTCCCATCAC
CCTGCACCTCGGAGACTACAACTTGGATGGCTTTCCTGAT
GCCCTTGTGATCCTCCGTAACACCAGCGCCAGTTCACAGC
AGCAGGCGTTCCTGCTGGAGAACGTGGCTTGTAACGACGC
GAGCTGTCAGGAGGCTGAACGCATGTTTCGTGTGCATTGG
GAGCAGTCGGACCTCAGTGCAATCCCCAGGGCTGTTGTGG
CCACTTTTTTTGACATCTATGAGGACGGTATATTAGATAT
GATCGTGCTCAGCAAGGTGGAAGGGAAAGAAGAACTCGTC
ATCCACGCTTTGAAGAACAACTTTGAGGCCGACGCGTATT
TCGTGAAAGTCATCGTGCTCAGTGGCCTGTGCTCCAATGA
CTGTCCAGAAAAAGTCAAGCCCTTTGGTGTGAACCAGCCT
GGCCCGTATGTCATGTACACATCGGTGGACTCGAACGGTT
ATCTAAAGAACGCTTCTGCGGGGCAGCTCAGCCAGTCTGC
TCATCTGGCTCTCCAGCTGCCCTACACCGTGCTCGGTCTG
GGGCGCAGCGCCAACTTCCTGGATCACCTGTTTGTGGGCA
TCCCCCGGCCCCCTGGAGGGAAGGTACAGACATACCTTCT
CACACACGCTCACAGACACTCTATGCTTTGGGTCATTCTC
TATCTGCACTGTGAAGCGAATTCATCCCACTGCTTTTGTC
AGCAGTCACATCATCCATAA

OTTDART00000063929 (1) [ Show ]

[Download]

>OTTDART00000063929 ZDB-TSCRIPT-160623-447 cdna:putative chromosome:VEGA67:7:41732752:41990126:-1 gene:OTTDARG00000042902.6 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:itfg1 description:integrin alpha FG-GAP repeat containing 1
GAACACTTCCGGGATGTACTAGTGGCTCAAACTCGCTCAT
TTTGAGGCAGGAACCGGCGGACGTGCAACAACCTTAACTA
TGAGATTTGTTCCTCACCACCACATCAAATGAATTCGAGA
CCTGGATTAATAAGGATGGGAACTTCACCAAAGCCCCGTC
TGGACCTTCTCTGGAGAATGTGAAGAGAGTGGGTCAATCT
GCATTCGTAGACTTCGACGGTGATGGCTTCCAGGACCACC
TGTTGCCGGTGTGTATGGACGATGCGTGTGCTAAAAGTGC
AATATACCTGGCCAGGCCTGGGGGGACAAAGTGGGTGCCT
GTGTTGATGGACTTCAAGAGGAAGGATTCTGTGTGGGGTT
TTGTGCCCGCTCCAGAAAAGCCCACTTCGGAAGAACTGCG
AATTCCCATCACCCTGCACCTCGGAGACTACAACTTGGAT
GGCTTTCCTGATGCCCTTGTGATCCTCCGTAACACCAGCG
CCAGTTCACAGCAGCAGGCGTTCCTGCTGGAGAACGTGGC
TTGTAACGACGCGAGCTGTCAGGAGGCTGAACGCATGTTT
CGTGTGCATTGGGAGCAGTCGGACCTCAGTGCA

Related Transcripts

Genome Build: GRCz11Chromosome: 7

Transcripts related to itfg1

Type	Name	Annotation Method	Has Havana Data	Length (nt)	Analysis
mRNA	itfg1-201 (1) Ensembl	Ensembl		4,855 nt	Select Tool ZFIN BLAST
mRNA	itfg1-202	Ensembl		1,260 nt

1 - 2 of 2

Segment Relationships

Relationship	Marker Type	Marker	Citations
Contained in	BAC	CH73-212P10	ZFIN Curated Data
Contained in	BAC	DKEY-11G15	ZFIN Curated Data
Contained in	BAC	DKEY-96K10	ZFIN Curated Data

1 - 3 of 3

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Protein Products

No data available

Supporting Sequences

Type	Accession #	Sequence	Length (nt/aa)	Analysis
RNA	GenBank:FP213208 (1)		634 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT

Citations

Include unpublished citations

No data available