Transcript

map7d2b-205

ID

ZDB-TSCRIPT-160112-690

Name

map7d2b-205 Nomenclature History

Previous Names

map7d2b-003

Transcript Type

aberrant processed transcript

Annotation Status

nonsense mediated decay

Annotation Method

Ensembl

Associated With Genes

map7d2b (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000173220 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|ENSDART00000173220.2|gene_biotype:protein_coding|ENSDARG00000045316.9 transcript_biotype:nonsense_mediated_decay gene_symbol:map7d2b cdna chromosome:GRCz11:24:24135928:24146875:-1
CACGTCATTGGGTTTGCACGCATACTGGGAGCAAGAGCAG
GGGGGGAGAGAGAGAGACGGAGAGGAGAGGTGTTGGCCAT
GGAGCAGCCAGCCTCATCCCCGTCAGCTCGCCGGCGCAGT
GAAAGCTCAGTCAGAGAATCTCTTTTCTTTCCTGTTTTGG
AACGCAACGAACAGGAGCGACTGGAGGCCCTGATGCGACG
TTCCACAAACCGCAACCTCCAGGCGGATCAGAGGCCCAAA
CGCTGGACGTGGTGCGGACCTCCGGGAGCCTGCGAGGTCC
AAGATTTTATGATTCTGCCCGACTCTCCAGACTCTCTCCT
GAGCAGACACCTCTCCTCGTCCTCTGCTACTTTGCCCAAT
ATGACAGAGAAAGGCAACCTCCTCCAGCCCTCACAGGTCT
CCTTACAGGGCTTCACCCAGCAGAGCAGAGAGGAAGAAGG
TCAGTGCTTCATTCTGTGGACCACTGGACGACTCCAGAGG
AGCGGCCACCACCCCGAAAACCCCTCAGACTGAGAAGCCG
GAAAAAAGCATCGCCCAAACTTTAGCTGACTCGACGATGA
AGAAACTGGAGTCTCCAACAACGCCCACTCGAAGCTCCTC
CTCCACTCGCAAAAACCCCAGCACACCGAAAAGATCTAAG
TCTTGTAAGAGTCGTATTCAGTCTCCAGCCTCTCCGGGTC
AGTTTCCTTCATCCCCAATGAGACACAGAGCAACAACACC
CAGTGCTGAGAACAGAATTCGGGACGGGGAAGAGAAAATT
TCGGAGGGGAGTAAAGGATACAGCACTCTAGAGAGAAAGA
GCTCCAGAACTGAGAGAATGCCCAAATCCAC

OTTDART00000062428 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000062428|OTTDARG00000031971| DKEY-226L10.5|OTTDARP00000048793 DKEY-226L10.5-003 LG_none CT574587.12,BX649452.4 Danio rerio protein_coding NOVEL, 831 bp
CACGTCATTGGGTTTGCACGCATACTGGGAGCAAGAGCAG
GGGGGGAGAGAGAGAGACGGAGAGGAGAGGTGTTGGCCAT
GGAGCAGCCAGCCTCATCCCCGTCAGCTCGCCGGCGCAGT
GAAAGCTCAGTCAGAGAATCTCTTTTCTTTCCTGTTTTGG
AACGCAACGAACAGGAGCGACTGGAGGCCCTGATGCGACG
TTCCACAAACCGCAACCTCCAGGCGGATCAGAGGCCCAAA
CGCTGGACGTGGTGCGGACCTCCGGGAGCCTGCGAGGTCC
AAGATTTTATGATTCTGCCCGACTCTCCAGACTCTCTCCT
GAGCAGACACCTCTCCTCGTCCTCTGCTACTTTGCCCAAT
ATGACAGAGAAAGGCAACCTCCTCCAGCCCTCACAGGTCT
CCTTACAGGGCTTCACCCAGCAGAGCAGAGAGGAAGAAGG
TCAGTGCTTCATTCTGTGGACCACTGGACGACTCCAGAGG
AGCGGCCACCACCCCGAAAACCCCTCAGACTGAGAAGCCG
GAAAAAAGCATCGCCCAAACTTTAGCTGACTCGACGATGA
AGAAACTGGAGTCTCCAACAACGCCCACTCGAAGCTCCTC
CTCCACTCGCAAAAACCCCAGCACACCGAAAAGATCTAAG
TCTTGTAAGAGTCGTATTCAGTCTCCAGCCTCTCCGGGTC
AGTTTCCTTCATCCCCAATGAGACACAGAGCAACAACACC
CAGTGCTGAGAACAGAATTCGGGACGGGGAAGAGAAAATT
TCGGAGGGGAGTAAAGGATACAGCACTCTAGAGAGAAAGA
GCTCCAGAACTGAGAGAATGCCCAAATCCAC

Related Transcripts

Transcripts related to map7d2b

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	map7d2b-205	Ensembl	831 nt
mRNA	map7d2b-201 (1) Ensembl	Ensembl	5,808 nt	Select Tool ZFIN BLAST
mRNA	map7d2b-202 (1) Ensembl	Ensembl	3,407 nt	Select Tool ZFIN BLAST
mRNA	map7d2b-204 (1) Ensembl	Ensembl	3,049 nt	Select Tool ZFIN BLAST
ncRNA	map7d2b-002 (1) Ensembl	Ensembl	717 nt	Select Tool ZFIN BLAST

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations