Transcript

cdpf1-205

ID

ZDB-TSCRIPT-160112-332

Name

cdpf1-205

Previous Names

si:ch211-239e6.4-005

Transcript Type

aberrant processed transcript

Annotation Status

nonsense mediated decay

Annotation Method

Havana

Associated With Genes

cdpf1 (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

OTTDART00000062299 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000062299|OTTDARG00000008128| CH211-239E6.4|OTTDARP00000048689 CH211-239E6.4-005 LG_ BX649425.3 Danio rerio protein_coding NOVEL, 724 bp
GACACACCGTAGCAGCAGCATGGCGTGAGCGGTCGTGCGC
GTGCTGGCTGCAGACAAACTTGCATCGTCTTGCAGACGGG
AATGGATTTGACGGAAGGCTCCGCGCTCGGCGTGTTCAGC
TGCCAGCTGTGCGAGGTTTCCAGCCCATACAGCTTTTACG
GACAGAAGCCGCCGAACACCAGAGCTATAGTCTTTGTTCC
ACTGAATGAAGTCTGTAGATGGGGATCAACTTTGAATGTC
TTCCTGACATGGCATCCTCCTGAAGGCTGTCATTTGGGCC
GAATATGCTCTTGGAGGAATGTTTTGGCATAAAGGACCCC
TTCAGCCCAGAGAGAGAGAAGTTTCTGATTTTAGGATCCA
AGTGCTCTCTGTGCAGCAAGACTGTGTGTGTGGGAACGGA
CTGCAGTTTGTTCTACACCAAGCGCTTCTGCTTGCCTTGT
GTGCGGGAGCACCTCGATCAGTTTCCAGAGCAGGTTCAGA
ACGAGCTGCTGAGGAAGAAGAGCGTCCAGAAGAGCACGTC
CTCATGATAATTGATTTCATGTGATTATATTCATTTATGA
TCAGATCAATGAAATGAAAGTGTGAGTGATGATAAAGTTT
GATTTTGTGGTTGTGCTCGTATGAAGCAAGTTTGAGCAGC
AGAGCATCTGTTGAATGTGACCGTTTATGGTGTTTACACA
ATATTTTGTAAGTGACAAGAGTGTTAAATAAATAGTGTGA
AGAA

Related Transcripts

Transcripts related to cdpf1

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	cdpf1-205	Havana	724 nt
mRNA	cdpf1-201 (1) Ensembl	Havana	882 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	cdpf1-202 (1) Ensembl	Havana	775 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	cdpf1-204 (1) Ensembl	Havana	842 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
ncRNA	si:ch211-239e6.4-002 (1) Ensembl	Havana	558 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations