Transcript

aga-202

ID

ZDB-TSCRIPT-160112-178

Name

aga-202 Nomenclature History

Previous Names

aga-002

Transcript Type

aberrant processed transcript

Annotation Status

nonsense mediated decay

Annotation Method

Ensembl

Associated With Genes

aga (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000173350 (1) [ Show ] (double-click sequence to select)

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>tpe|ENSDART00000173350.2|gene_biotype:protein_coding|ENSDARG00000004889.10 transcript_biotype:nonsense_mediated_decay cdna chromosome:GRCz11:14:36430243:36437239:-1
TATAGCCTAGAACCCGTCGATTGAGTAATGAATCATGATT
CAGCGATTATTTATCATTGTTTGTTTTCTTCCTCTAAATC
AAGCTTCGCTGCCATTGGTGATAAACACATGGCGCTTTGA
GGATGCAGCCGGCGCAGCCTGGAAGGCGTTGGAGAAGGGT
AGCTCGGTTCTAGACGCGGTAGAGCGGGGCTGTGCGTACT
GTGAGCTCGTGCAGTGTGATGGGAGCGTCGGCTTTGGCGG
GAGTCCGGACGAGCGCGGAGAGACGACGCTGGACGCGATG
ATTATGAATGGAGATACGATGGAAGTAGGAGCAGTGGCAG
ATCTGCGCAGGGTCAAAAATGCTGTGGGTGTCGCTCGAGC
AGTGATGGAACACTCAGAGCACACCTTCATAGTGGGCGAG
TCGGCCACAATCTTTGCTCAAAACATGGGCTTCACGTCTG
AGGACTTGTCAACTAACAAATCAATAGCTATTTTCTCTCA
GTGGCTGCAGCAGAATTGTCAACCCAACTATAGAAAGGTA
TGGTTGTGATCGGAAGGCAAGGACAGGTAGCTGCTGCAAC
ATCCACCAATGGAGCAACACATAAGATACCAGGCCGTGTA
GGTGATTCACCAGTGGCTGGAGCCGGGGCTTATGCTGACA
GCACAGTCGGTGGAGCGGCTGCCACAGGAGACGGAGACAT
CATGATGCGTTTCCTTCCAAG

OTTDART00000062809 (1) [ Show ] (double-click sequence to select)

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>tpe|OTTDART00000062809|OTTDARG00000043332| aga|OTTDARP00000049099 aga-002 LG_ CR853287.7 Danio rerio protein_coding KNOWN, 701 bp
TATAGCCTAGAACCCGTCGATTGAGTAATGAATCATGATT
CAGCGATTATTTATCATTGTTTGTTTTCTTCCTCTAAATC
AAGCTTCGCTGCCATTGGTGATAAACACATGGCGCTTTGA
GGATGCAGCCGGCGCAGCCTGGAAGGCGTTGGAGAAGGGT
AGCTCGGTTCTAGACGCGGTAGAGCGGGGCTGTGCGTACT
GTGAGCTCGTGCAGTGTGATGGGAGCGTCGGCTTTGGCGG
GAGTCCGGACGAGCGCGGAGAGACGACGCTGGACGCGATG
ATTATGAATGGAGATACGATGGAAGTAGGAGCAGTGGCAG
ATCTGCGCAGGGTCAAAAATGCTGTGGGTGTCGCTCGAGC
AGTGATGGAACACTCAGAGCACACCTTCATAGTGGGCGAG
TCGGCCACAATCTTTGCTCAAAACATGGGCTTCACGTCTG
AGGACTTGTCAACTAACAAATCAATAGCTATTTTCTCTCA
GTGGCTGCAGCAGAATTGTCAACCCAACTATAGAAAGGTA
TGGTTGTGATCGGAAGGCAAGGACAGGTAGCTGCTGCAAC
ATCCACCAATGGAGCAACACATAAGATACCAGGCCGTGTA
GGTGATTCACCAGTGGCTGGAGCCGGGGCTTATGCTGACA
GCACAGTCGGTGGAGCGGCTGCCACAGGAGACGGAGACAT
CATGATGCGTTTCCTTCCAAG

Related Transcripts

Transcripts related to aga

Type	Name	Annotation Method	Has Havana Data	Length (nt)	Analysis
aberrant processed transcript	aga-202	Ensembl		701 nt
mRNA	aga-201 (1) Ensembl	Ensembl		1,286 nt	Select Tool ZFIN BLAST

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations