Transcript

ottdart00000061149

ID

ZDB-TSCRIPT-141209-876

Name

ottdart00000061149 Nomenclature History

Previous Names

None

Transcript Type

ncRNA

Annotation Status

retained intron

Annotation Method

Ensembl

Associated With Genes

ogfr2 (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000160618 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|ENSDART00000160618.2|gene_biotype:protein_coding|ENSDARG00000024815.10 transcript_biotype:retained_intron gene_symbol:ogfr2 cdna chromosome:GRCz11:11:20092444:20095839:-1
CATTTCTGAGGTGTCTGAAGTCTTGGTTCTTTGGCCTGTT
AAGGTTTACACATAATTTGTTTGCTCGTACTTGGTTTCGT
CGTATTAATAGTAGTTTGCGGTCTACTAAACATATTAGTA
TGGAGTCAGATGATGATTGCGACTGCGAGTTGGACTCCAC
ATGGGAAGATGAAGATGAAAACAAAACACCCAATGAGAAG
CTCAAGAAGAGTCGCAGGAACATGTATGCAGCCAAGGACA
TGCAAGACTTCCGGCATCGTTGCCTGGAACTAGATGATGA
CTATGAGGAGGATTATACCATGGAAAAAGAAGATGATGCA
TTTCAGATTGTCAGAATTTGCTATTTACAATGTTTATAAA
CCATATTTTAAAGTATAATTTACCTGCATCTCTGGTGTAA
TGCTAGATTTGATTTGTATGAAATGCTTGAGAAATTGTTG
CATTTATTTATATATATATATGTGTGTGTGTGTGTGTGTG
TGTGGGTATATATTGTTGTTGTCATCCCCTAGAATCCCCT
ATATCATCTGAAGTTTTACAGAGGTGAAATAAAAGCTGCG
CCAGTCGCTATTCACATTGATGGTTTTCACAAAGACTGGT
GGGGTCAATATGATTTGCTTGAAAAGGCTCACTACTACAT
TCAATGGCTATTTCCAATACAAAGGAAAGTTAACAACTGG
AGAATACATTGTCTCAGAAAAAAGGAAATTATGCTATTCC
GCAGAGATGAGGATGTAAAACATAAGCTGATCAAATCATA
TAAAGTCATGTTGGATTTCTATGGAATACGTTTGGCTGAT
GAAAAAACAGGAAAGGTGGAACGTGCCGAGAATTGGAAGC
AACGCTTTAACAACTTGAACAGAAATACTCACAACAACCT
GCGCATCACACGCATCCTGAAGTGTTTGGGGACTTTAGGA
TTGGAGCACTATCAGGCACCACTTGTCAAGTTTTTCCTCC
ATGAGACTTTGTTTCAAGGACAACTTAAGAATGTCAAACA
AAGTGTACTAGATTACTTTATGTTTGCAGTTTTGGACAAA
TCAAAGAGGAGGGAACTGATTAGATATGCTTATTTGTATT
TCAAACCCAGAAAAGACTTTGTCTGGGGCTCAAAGAAGAT
TCTGAAAGTGAAAACTTATCCTTGGGACTGCCATCATGAA
ATGACCAAAATACATGCCAGTCTTCCACCTGAAGAGATGG
GAAGTGACAATAAAAATGATGACCAGAAAGATGATGCAGT
TAGTCAAAACAGACTGAAGGGAGAATGTTCAAAGTCATCA
AAGGGAAACTAATGGGAACAGTCAAAGTAGCTCAAATGGT
GACCAGATAGTCCAGAGAAGATGAATGAAGAGAGTGAGTC
AAATGATAAGAACA

OTTDART00000061149 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000061149|OTTDARG00000042371|ZDB-GENE-030616-523 ogfrl2|no_translation ogfrl2-002 LG_ CU019544.14 Danio rerio protein_coding NOVEL, 1374 bp
CATTTCTGAGGTGTCTGAAGTCTTGGTTCTTTGGCCTGTT
AAGGTTTACACATAATTTGTTTGCTCGTACTTGGTTTCGT
CGTATTAATAGTAGTTTGCGGTCTACTAAACATATTAGTA
TGGAGTCAGATGATGATTGCGACTGCGAGTTGGACTCCAC
ATGGGAAGATGAAGATGAAAACAAAACACCCAATGAGAAG
CTCAAGAAGAGTCGCAGGAACATGTATGCAGCCAAGGACA
TGCAAGACTTCCGGCATCGTTGCCTGGAACTAGATGATGA
CTATGAGGAGGATTATACCATGGAAAAAGAAGATGATGCA
TTTCAGATTGTCAGAATTTGCTATTTACAATGTTTATAAA
CCATATTTTAAAGTATAATTTACCTGCATCTCTGGTGTAA
TGCTAGATTTGATTTGTATGAAATGCTTGAGAAATTGTTG
CATTTATTTATATATATATATGTGTGTGTGTGTGTGTGTG
TGTGGGTATATATTGTTGTTGTCATCCCCTAGAATCCCCT
ATATCATCTGAAGTTTTACAGAGGTGAAATAAAAGCTGCG
CCAGTCGCTATTCACATTGATGGTTTTCACAAAGACTGGT
GGGGTCAATATGATTTGCTTGAAAAGGCTCACTACTACAT
TCAATGGCTATTTCCAATACAAAGGAAAGTTAACAACTGG
AGAATACATTGTCTCAGAAAAAAGGAAATTATGCTATTCC
GCAGAGATGAGGATGTAAAACATAAGCTGATCAAATCATA
TAAAGTCATGTTGGATTTCTATGGAATACGTTTGGCTGAT
GAAAAAACAGGAAAGGTGGAACGTGCCGAGAATTGGAAGC
AACGCTTTAACAACTTGAACAGAAATACTCACAACAACCT
GCGCATCACACGCATCCTGAAGTGTTTGGGGACTTTAGGA
TTGGAGCACTATCAGGCACCACTTGTCAAGTTTTTCCTCC
ATGAGACTTTGTTTCAAGGACAACTTAAGAATGTCAAACA
AAGTGTACTAGATTACTTTATGTTTGCAGTTTTGGACAAA
TCAAAGAGGAGGGAACTGATTAGATATGCTTATTTGTATT
TCAAACCCAGAAAAGACTTTGTCTGGGGCTCAAAGAAGAT
TCTGAAAGTGAAAACTTATCCTTGGGACTGCCATCATGAA
ATGACCAAAATACATGCCAGTCTTCCACCTGAAGAGATGG
GAAGTGACAATAAAAATGATGACCAGAAAGATGATGCAGT
TAGTCAAAACAGACTGAAGGGAGAATGTTCAAAGTCATCA
AAGGGAAACTAATGGGAACAGTCAAAGTAGCTCAAATGGT
GACCAGATAGTCCAGAGAAGATGAATGAAGAGAGTGAGTC
AAATGATAAGAACA

Related Transcripts

Transcripts related to ogfr2

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	ogfrl2-001 (1)	Havana	578 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	ogfrl2-002 (1)	Havana	530 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	ogfrl2-004 (1)	Havana	524 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	ogfrl2-201 (1) Ensembl	Ensembl	2,559 nt	Select Tool
ncRNA	ogfrl2-003 (1)	Havana	504 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
ncRNA	ottdart00000061149	Ensembl	1,374 nt
ncRNA	ottdart00000061150 (1) Ensembl	Ensembl	756 nt	Select Tool

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations