Transcript

smim19-203

ID
ZDB-TSCRIPT-141209-801
Name
smim19-203 Nomenclature History
Previous Names
  • smim19-003
  • ch211-175m2.1-003
Transcript Type
aberrant processed transcript
Annotation Status
nonsense mediated decay
Annotation Method
Ensembl
Associated With Genes
Strain
TU
Non Reference Strain
Genome Resources
RNA Central
None
Note
None
Sequence
ENSDART00000166078 (1) [ Show ] (double-click sequence to select) [Download]
>tpe|ENSDART00000166078.2|gene_biotype:protein_coding|ENSDARG00000037423.8 transcript_biotype:nonsense_mediated_decay gene_symbol:smim19 cdna chromosome:GRCz11:14:21238682:21245773:1
ACATCTTCGTCTCGCTCATCCGGAACTGAATGTTTGTTGT
TGGAGTCGTTGATTTTGATGCTAAATGATTATAGTTTTTG
TTGTATATTTGCGCATTTTATTAAACGCACAATAATCTCC
TCGTTATGGGTGGCTACGGGGTGATGGCAGATGAGGAGTC
TCTAGATTATTCGGTACACGAAGCCTGGAACGAGGCCACT
AATGTTTACTTGCTGGTTATTTTGGTCAGTTTCGCCCTGC
TAATGTACGCCAGAAAAAACAAGAGGAAGATTATGCGCAT
ATTTACACTGCCACCGACAGTCGGCAGCTCATCGGAGCCA
AACTTCTACGACAGTCTGCAGAAGGTCCGACTCAGACAAC
AACTGGAAATGTATTCACTGGCTCGTAAATATGACCAGCA
GCAGTCGCAGTCTGAGAGTGTGCAGCTGTCAATGGAGTGA
TTTGACCAGAGGAGGCGCTCTTCGCCCATCAATGCTGCTC
ATGTCAATAAAGCCGCTTCTGATCCGCGGTGGAATCTTTT
CCCCAGATGAATCACAGAAAAGCTAAAGAAATGATGCCTT
TCCTCGCCTTAGTCATCAGCCTCCCCCTCCTTCTGTGCTT
TCCCTCAGGTCTCTGTGGAAATAAGATTAACAAACTCTTT
TCTTTATCATTTTTCAACCTCTAATAATTTTATTCTATAT
CTGCCTTTGCCTTTATACAAAATGCCAAGAGTCTCATCTC
AAAACATAAGCTGCTGCAGAACAAAAAGAGAATTCTTTAA
GAATGTTCCTGCAGCCTTTTCCATCTGTCAGAAAGCTTTA
AAAAGCATCACATCAGCATTCCATGAGACTATATATACGT
GCTATATTTAAAGTCTTCTCAAGTCATGTGATGGCTTTGT
GGGACAAACATAGGGACAATATGAAATCTTTTATGACAGG
TTTGATGCCATGACTTTTTTTTTTGTTAAAAATCATGCAG
GGATCAGTGGTGTTTATTGTAATAATCGATGTCAAAAAGC
ATTTAAATAATAGAGAATGAGTCATATGAACTGTTTTATG
GGGATTATTATTTTTATTTTTGTTCTTTCTGAATATTGGT
AGAAAAAAAAATATTTAAGTTTTTTTATTTAATTTAAGCC
CCGAAGAATTTGTTATTACATGTTGTGATTAATGAGAAAA
TTAGCAATATGAAGATAATTAAAAGTAAGACCGAAATCTT
CAACTGGGTCAGACAATATATACTTTGTTCAAGCATGTAC
TGGCTGATATACTTTTTAAACATGAGCTTGAAATGAAAAC
ATGAGATGATATCTCTCAATTCTCTCTTGGTGGTGAAAAA
TATTAAAATAAAACGAACTGAAAGATGCAAA

OTTDART00000060908 (1) [ Show ] (double-click sequence to select) [Download]
>tpe|OTTDART00000060908|OTTDARG00000022458|ZDB-GENE-050913-125 smim19|OTTDARP00000047069 CH211-175M2.1-003 LG_ BX470131.7 Danio rerio protein_coding KNOWN, 1351 bp
ACATCTTCGTCTCGCTCATCCGGAACTGAATGTTTGTTGT
TGGAGTCGTTGATTTTGATGCTAAATGATTATAGTTTTTG
TTGTATATTTGCGCATTTTATTAAACGCACAATAATCTCC
TCGTTATGGGTGGCTACGGGGTGATGGCAGATGAGGAGTC
TCTAGATTATTCGGTACACGAAGCCTGGAACGAGGCCACT
AATGTTTACTTGCTGGTTATTTTGGTCAGTTTCGCCCTGC
TAATGTACGCCAGAAAAAACAAGAGGAAGATTATGCGCAT
ATTTACACTGCCACCGACAGTCGGCAGCTCATCGGAGCCA
AACTTCTACGACAGTCTGCAGAAGGTCCGACTCAGACAAC
AACTGGAAATGTATTCACTGGCTCGTAAATATGACCAGCA
GCAGTCGCAGTCTGAGAGTGTGCAGCTGTCAATGGAGTGA
TTTGACCAGAGGAGGCGCTCTTCGCCCATCAATGCTGCTC
ATGTCAATAAAGCCGCTTCTGATCCGCGGTGGAATCTTTT
CCCCAGATGAATCACAGAAAAGCTAAAGAAATGATGCCTT
TCCTCGCCTTAGTCATCAGCCTCCCCCTCCTTCTGTGCTT
TCCCTCAGGTCTCTGTGGAAATAAGATTAACAAACTCTTT
TCTTTATCATTTTTCAACCTCTAATAATTTTATTCTATAT
CTGCCTTTGCCTTTATACAAAATGCCAAGAGTCTCATCTC
AAAACATAAGCTGCTGCAGAACAAAAAGAGAATTCTTTAA
GAATGTTCCTGCAGCCTTTTCCATCTGTCAGAAAGCTTTA
AAAAGCATCACATCAGCATTCCATGAGACTATATATACGT
GCTATATTTAAAGTCTTCTCAAGTCATGTGATGGCTTTGT
GGGACAAACATAGGGACAATATGAAATCTTTTATGACAGG
TTTGATGCCATGACTTTTTTTTTTGTTAAAAATCATGCAG
GGATCAGTGGTGTTTATTGTAATAATCGATGTCAAAAAGC
ATTTAAATAATAGAGAATGAGTCATATGAACTGTTTTATG
GGGATTATTATTTTTATTTTTGTTCTTTCTGAATATTGGT
AGAAAAAAAAATATTTAAGTTTTTTTATTTAATTTAAGCC
CCGAAGAATTTGTTATTACATGTTGTGATTAATGAGAAAA
TTAGCAATATGAAGATAATTAAAAGTAAGACCGAAATCTT
CAACTGGGTCAGACAATATATACTTTGTTCAAGCATGTAC
TGGCTGATATACTTTTTAAACATGAGCTTGAAATGAAAAC
ATGAGATGATATCTCTCAATTCTCTCTTGGTGGTGAAAAA
TATTAAAATAAAACGAACTGAAAGATGCAAA

Segment Relationships
Protein Products
No data available
Supporting Sequences
Citations