Transcript

ptbp1b-205

ID

ZDB-TSCRIPT-141209-793

Name

ptbp1b-205 Nomenclature History

Previous Names

ptbp1b-005

Transcript Type

aberrant processed transcript

Annotation Status

nonsense mediated decay

Annotation Method

Ensembl

Associated With Genes

ptbp1b (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000167811 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|ENSDART00000167811.2|gene_biotype:protein_coding|ENSDARG00000031907.9 transcript_biotype:nonsense_mediated_decay gene_symbol:ptbp1b cdna chromosome:GRCz11:11:14333441:14340783:1
CTCTGCTGCACCATACGCAAGCGCACATGCCTTCCCTCCA
GCTTTTGCTATTCAGCAGGCTGGATTGACAATACCTGGTG
TTCCTGGAGCTCTCGCCTCACTGACCATTCCCGGGGCAGC
AGCGGCTGCGGCAGCTGCAAGTAGACTGGGTTTTCCAACC
CTCACTGGCACACATTGCGTTATGCTGGTCAGCAACCTGA
ACCCTGAGGAGTATATGGGGATGTATTAAGGGTGAAAATT
ATGTTCAACAAAAAGGAGAACGCTCTCATACAGATGTCTG
ATGGAACACAGGCTCAGCTTGCAATGAGTCATCTAAATGG
ACAGAAGTTATATGGCAGGCCCCTGCGCATCACACTGTCC
AAACATACGACTGTTCAGATGCCACGCGAGGGACATGAGG
ACCAGGGTCTCACCAAAGACTACAGTAACTCTCCACTCCA
TCGCTTCAAGAAACCAGGCTCCAAAAACTACTCCAACATC
TTTCCTCCTTCATCTACTCTGCACCTGTCTAATATCCCAC
CCTCTGTTGTTGAGGATGACCTTAAGCTGCTCTTTGGTAG
CAGTGGTGCTCTGGTCAAGAACTTTAAGTTCTTTCAAAAA
GATCGCAAGATGGCTCTGATTCAAATGAGTTCAGTGGAGG
AAGCAATCGAGTCTCTCATCCAGTTCCACAACCACGATCT
TGGAGAAAACCACCATCTTAGGGTTTCCTTTTCCAAGTCC
ACTATTTGAGACAAATGTGGTCTAGAAGGGGCTGGAGTGG
CCAGTCATTTTAAACCCTAACAAGTCTTAATCACAAAGCT
CACTTCCATCATTCCATTGTTTTA

OTTDART00000060884 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000060884|OTTDARG00000027692|ZDB-GENE-030131-9796 ptbp1b|OTTDARP00000047059 ptbp1b-005 LG_ CR847939.13 Danio rerio protein_coding KNOWN, 824 bp
CTCTGCTGCACCATACGCAAGCGCACATGCCTTCCCTCCA
GCTTTTGCTATTCAGCAGGCTGGATTGACAATACCTGGTG
TTCCTGGAGCTCTCGCCTCACTGACCATTCCCGGGGCAGC
AGCGGCTGCGGCAGCTGCAAGTAGACTGGGTTTTCCAACC
CTCACTGGCACACATTGCGTTATGCTGGTCAGCAACCTGA
ACCCTGAGGAGTATATGGGGATGTATTAAGGGTGAAAATT
ATGTTCAACAAAAAGGAGAACGCTCTCATACAGATGTCTG
ATGGAACACAGGCTCAGCTTGCAATGAGTCATCTAAATGG
ACAGAAGTTATATGGCAGGCCCCTGCGCATCACACTGTCC
AAACATACGACTGTTCAGATGCCACGCGAGGGACATGAGG
ACCAGGGTCTCACCAAAGACTACAGTAACTCTCCACTCCA
TCGCTTCAAGAAACCAGGCTCCAAAAACTACTCCAACATC
TTTCCTCCTTCATCTACTCTGCACCTGTCTAATATCCCAC
CCTCTGTTGTTGAGGATGACCTTAAGCTGCTCTTTGGTAG
CAGTGGTGCTCTGGTCAAGAACTTTAAGTTCTTTCAAAAA
GATCGCAAGATGGCTCTGATTCAAATGAGTTCAGTGGAGG
AAGCAATCGAGTCTCTCATCCAGTTCCACAACCACGATCT
TGGAGAAAACCACCATCTTAGGGTTTCCTTTTCCAAGTCC
ACTATTTGAGACAAATGTGGTCTAGAAGGGGCTGGAGTGG
CCAGTCATTTTAAACCCTAACAAGTCTTAATCACAAAGCT
CACTTCCATCATTCCATTGTTTTA

Related Transcripts

Transcripts related to ptbp1b

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	ptbp1b-205	Ensembl	824 nt
mRNA	ptbp1b-201 (1) Ensembl	Ensembl	3,619 nt	Select Tool
mRNA	ptbp1b-202 (1) Ensembl	Ensembl	311 nt	Select Tool
mRNA	ptbp1b-203 (1) Ensembl	Ensembl	341 nt	Select Tool
mRNA	ptbp1b-206 (1) Ensembl	Ensembl	765 nt	Select Tool
ncRNA	ptbp1b-004 (1) Ensembl	Ensembl	801 nt	Select Tool

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations