Transcript

si:ch73-281i18.6-203

ID

ZDB-TSCRIPT-141209-382

Name

si:ch73-281i18.6-203 Nomenclature History

Previous Names

ch73-281i18.6-003
si:ch73-281i18.6-003

Transcript Type

aberrant processed transcript

Annotation Status

nonsense mediated decay

Annotation Method

Ensembl

Associated With Genes

si:ch73-281i18.6 (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000170007 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|ENSDART00000170007.2|gene_biotype:protein_coding|ENSDARG00000101490.2 transcript_biotype:nonsense_mediated_decay gene_symbol:si:ch73-281i18.6 cdna chromosome:GRCz11:19:3919591:3925630:-1
AGATCATTGTCTGAGCAGAAGTTTCATCATTAGCCCTGAC
TGTCAGATGCTCTTCATCTCAGGAGCTTTATTTTTAGATG
CTTGATAACAGATATAAGCGAGAAGAGGCTGAATCCAAAG
CCCGAGAGAAAGCAGAGAAACAGGGGATCGAACGAGAGAA
ACACTTCCAGAAGGAGGAGCTGGAACGCTTGGAAAGAAAG
AAGCGTCTGGAAGAAATCATGAAGAGGACTCGTAAGAGTG
ACGCAGGAGCACAGAAAGATGTTAAAACTCCAACTCAAGT
GAATGGCAGAGTCACTGACAGCGAAAAATCCGTCAGAAGC
TCTTCATAGTGGTGCGACAAACCAATCACCAATGAGCTCT
GTGTCCTGGGACGCAGCACCGGTCATTAACGGAGCTCCGC
CCACTAAGCATCAGAATGGACTGTCCTCCAATGGAGACGC
AGCAGACTTTGAGGAGATAATCAAGCTGTCCAATCACAGT
GGGAACAGTGGGCAGAGTCAACCGGCTGACCCAATCATGG
CCTTCGAGGGAGGAGAACCGTTCATGATGAAGGCGGGGCC
TATGAAACCTCAATATGTGGCAGAGGTGCTGTGAGAGATA
TCAGAGTCTTCTGGATATAAAGAGAAGAAGAGAAGCCTTA
CTCTACCACCGCTGCCACCCTGACGTGTGCCAAACCAACA
AAAACAGACTGCTTTAACTTTAGAAACACAGCCGAGCCGG
ACGCGCTCTGGAGAAAGTGCCAGAAGACGACCTTAAAGAG
ACACTTATATACATATACAACGTTTGCAAAAAGTCTCTAT
TTCACTGTGTGTGTCATGGTGCAACATTTGTTGAGTTTCT
TTAACAAGTCACCTGCCGATCATGTGGTGCACCTTAAAAG
AGTCGCTATATATTGAATTTTAGAAAAGACAACTT

OTTDART00000053168 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000053168|OTTDARG00000037296|ZDB-GENE-141219-21 si:ch73-281i18.6|OTTDARP00000041820 CH73-281I18.6-003 LG_ CU694258.28 Danio rerio protein_coding NOVEL, 915 bp
AGATCATTGTCTGAGCAGAAGTTTCATCATTAGCCCTGAC
TGTCAGATGCTCTTCATCTCAGGAGCTTTATTTTTAGATG
CTTGATAACAGATATAAGCGAGAAGAGGCTGAATCCAAAG
CCCGAGAGAAAGCAGAGAAACAGGGGATCGAACGAGAGAA
ACACTTCCAGAAGGAGGAGCTGGAACGCTTGGAAAGAAAG
AAGCGTCTGGAAGAAATCATGAAGAGGACTCGTAAGAGTG
ACGCAGGAGCACAGAAAGATGTTAAAACTCCAACTCAAGT
GAATGGCAGAGTCACTGACAGCGAAAAATCCGTCAGAAGC
TCTTCATAGTGGTGCGACAAACCAATCACCAATGAGCTCT
GTGTCCTGGGACGCAGCACCGGTCATTAACGGAGCTCCGC
CCACTAAGCATCAGAATGGACTGTCCTCCAATGGAGACGC
AGCAGACTTTGAGGAGATAATCAAGCTGTCCAATCACAGT
GGGAACAGTGGGCAGAGTCAACCGGCTGACCCAATCATGG
CCTTCGAGGGAGGAGAACCGTTCATGATGAAGGCGGGGCC
TATGAAACCTCAATATGTGGCAGAGGTGCTGTGAGAGATA
TCAGAGTCTTCTGGATATAAAGAGAAGAAGAGAAGCCTTA
CTCTACCACCGCTGCCACCCTGACGTGTGCCAAACCAACA
AAAACAGACTGCTTTAACTTTAGAAACACAGCCGAGCCGG
ACGCGCTCTGGAGAAAGTGCCAGAAGACGACCTTAAAGAG
ACACTTATATACATATACAACGTTTGCAAAAAGTCTCTAT
TTCACTGTGTGTGTCATGGTGCAACATTTGTTGAGTTTCT
TTAACAAGTCACCTGCCGATCATGTGGTGCACCTTAAAAG
AGTCGCTATATATTGAATTTTAGAAAAGACAACTT

Related Transcripts

Transcripts related to si:ch73-281i18.6

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	si:ch73-281i18.6-203	Ensembl	915 nt
mRNA	si:ch73-281i18.6-201 (1) Ensembl	Ensembl	734 nt	Select Tool ZFIN BLAST
mRNA	si:ch73-281i18.6-202 (1) Ensembl	Ensembl	1,127 nt	Select Tool ZFIN BLAST

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations