Transcript

ottdart00000053080

ID

ZDB-TSCRIPT-141209-371

Name

ottdart00000053080 Nomenclature History

Previous Names

None

Transcript Type

ncRNA

Annotation Status

retained intron

Annotation Method

Ensembl

Associated With Genes

sf3b3 (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000162263 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|ENSDART00000162263.2|gene_biotype:protein_coding|ENSDARG00000103553.2 transcript_biotype:retained_intron gene_symbol:sf3b3 cdna chromosome:GRCz11:18:18551208:18555561:-1
GGAACAACCTGCTGAGCCATGTTGACCAAAACCTCTTTCT
TGTTCTTGCAGCATGTTCCTAATTTAGTGACAGGCATCCA
CACTATCGGCCAGCGTGTGATTGTTTCAGATGTTCAGGAG
AGTCTGTTCTGGGTGCGCTATCGCCGCAATGAGAACCAAC
TCATCATCTTTGCTGACGATACTTATCCTCGGTGGATCAC
CACTGCCTGTCTGCTTGATTATGACACAATGGCTTCAGCG
GATAAGTTTGGAAATATCTGCGTTGTGAGTGTCGCCACCT
GCTTTGTTTTGAAACCTTTGAGACCAGTGTGCTCTATAGT
CTGTTTGTCAAGCCAATATGACCAAAACAAACGTAAAAAA
TATTCCCCTGTAAATAATTACATTTAAACATTTTATTTTT
TAGTAAATGCGTTTGAGAATGAAAGTGGCATGCTAAATGT
ATGCTAAATCTTTATTAGGTTCGCCTTCCCCCAAACACCA
GCGATGATGTTGATGAGGACCCCACAGGGAACAAAGCATT
GTGGGACAGAGGCTTGCTTAACGGAGCTTCACAAAAGGCT
GAGATCATCATCAACTATCACATAGGAGAGACTGTGCTGT
CGCTCCAGAAAACCACACTCATCCCTGGAGGATCCGAGTC
TCTGGTGTACACCACACTATCTGGAGGCATTGGCATCCTG
GTTCCCTTCACCTCTCATGAGGATCACGATTTCTTCCAGC
ACTTGGAAATGCACATGCGCTCAGAGTTTCCTCCTCTGTG
TGGTCGAGATCATCTCAGCTTCCGCTCATACTATTTCCCT
GTCAAGAATGTGATTGACGGAGACCTGTGTGAGCAGTTT

OTTDART00000053080 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000053080|OTTDARG00000037251|ZDB-GENE-040426-2901 sf3b3|no_translation sf3b3-002 LG_ BX470163.9 Danio rerio protein_coding KNOWN, 839 bp
GGAACAACCTGCTGAGCCATGTTGACCAAAACCTCTTTCT
TGTTCTTGCAGCATGTTCCTAATTTAGTGACAGGCATCCA
CACTATCGGCCAGCGTGTGATTGTTTCAGATGTTCAGGAG
AGTCTGTTCTGGGTGCGCTATCGCCGCAATGAGAACCAAC
TCATCATCTTTGCTGACGATACTTATCCTCGGTGGATCAC
CACTGCCTGTCTGCTTGATTATGACACAATGGCTTCAGCG
GATAAGTTTGGAAATATCTGCGTTGTGAGTGTCGCCACCT
GCTTTGTTTTGAAACCTTTGAGACCAGTGTGCTCTATAGT
CTGTTTGTCAAGCCAATATGACCAAAACAAACGTAAAAAA
TATTCCCCTGTAAATAATTACATTTAAACATTTTATTTTT
TAGTAAATGCGTTTGAGAATGAAAGTGGCATGCTAAATGT
ATGCTAAATCTTTATTAGGTTCGCCTTCCCCCAAACACCA
GCGATGATGTTGATGAGGACCCCACAGGGAACAAAGCATT
GTGGGACAGAGGCTTGCTTAACGGAGCTTCACAAAAGGCT
GAGATCATCATCAACTATCACATAGGAGAGACTGTGCTGT
CGCTCCAGAAAACCACACTCATCCCTGGAGGATCCGAGTC
TCTGGTGTACACCACACTATCTGGAGGCATTGGCATCCTG
GTTCCCTTCACCTCTCATGAGGATCACGATTTCTTCCAGC
ACTTGGAAATGCACATGCGCTCAGAGTTTCCTCCTCTGTG
TGGTCGAGATCATCTCAGCTTCCGCTCATACTATTTCCCT
GTCAAGAATGTGATTGACGGAGACCTGTGTGAGCAGTTT

Related Transcripts

Transcripts related to sf3b3

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	sf3b3-201 (1) Ensembl	Ensembl	4,437 nt	Select Tool ZFIN BLAST
mRNA	sf3b3-203 (1) Ensembl	Ensembl	8,009 nt	Select Tool ZFIN BLAST
ncRNA	ottdart00000053080	Ensembl	839 nt

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations