Transcript

zgc:193807-202

ID
ZDB-TSCRIPT-141209-3306
Name
zgc:193807-202 Nomenclature History
Previous Names
  • ch211-160o17.3-001
  • zgc:193807-001
Transcript Type
aberrant processed transcript
Annotation Status
nonsense mediated decay
Annotation Method
Ensembl
Associated With Genes
Strain
TU
Non Reference Strain
Genome Resources
RNA Central
None
Note
None
Sequence
ENSDART00000173294 (1) [ Show ] (double-click sequence to select) [Download]
>tpe|ENSDART00000173294.2|gene_biotype:protein_coding|ENSDARG00000105440.2 transcript_biotype:nonsense_mediated_decay  cdna chromosome:GRCz11:11:2633791:2649394:1
GCAGATCCTGCTTCGGTGAAAATGGCCCACTATCTGGACG
ATTTTATTGCAGATTTCAAAAAACAAATGCTACAGAGAAC
GAACAGGAGCTGGAGAATCTGCTCATCAGCAACGCTAAAC
TGCGAGAAGAAGTAAAGAACAACCCTGAAGAAAAGGAGCG
TCGTGAGTACTACAGGAGGAAACTTTGGATTAACGACGTC
TATGACACATGTATAAGTGCGGCAGGAATGCCAGCGAACA
CACGGGACCCTCTGGAGCAGTTACAAATGTGTACGAGTTT
TGTTCAAGTTTTCTGATACTTCGTATATTTATGGATCAAA
AAATACAATTTCAACAGCCAAATCCCGTGACATGTGATGC
TGAAGACATGTACAAATACCCGCAAAAACCACCACCTCAT
AGGATGCCCAAAGGCACGCTGGACAGTGTCATGGGTGTAG
TGGAGAGAAGCGCAGTTTTCACCCGTCAGAGGGACATCAG
GCTGCCACCAATCCCTGGCATTAGTCATCATCTTGGGCCA
CCACCCGAGGTCCACCCCAGCCTCGATGCCCAGACACAGA
CTGACATTTATAAACGAATGAGAAGAACCATTAGAGCCAC
CTTATCAGATAAAGCAAAGAAAATTTTACAAAGTCGCTGT
GAACAGCAGAAAAAGAGCAGCATGGGTGTGAGAAAGAAAG
CCACGGTCTCCAGCCGACCAAAGACTGTCAAGCTTCCACC
TAGCTCTGCTCCACCAGTCTCTGTTCCACCTGAACCTGTC
CCACTTACCCCTGTCCCACCTGGCCCTTCCACAGCTACAG
GACTGCCTCCACATCCAGCAGCTCAGATGAGCGAGACTGC
GGTGGACCGAAGCCTCGACACTGGGAAAGACCTTCCAGTC
GTCGAGTCCTCGAAGAAAAAGAGAAACAGACCCCCAAAAG
CCTCAAGGAGAGATGAAGACATGGGATTTGAATTGATGGT
CATTTCTGAGATGTGGTGGGAAATCGCAGACGAAATCAGG
GAAATTGAGGCTAAAAAGGAAAACATCGTGAAGAAGGCAA
ACTGCTTGGAAAAAAGGTTTCATGCCAGTGTTCGCCTCAT
AGCAGAACAGCAGGAGGAAGAAAGGGATCTTAAGCAAATA
TGGCAGAGTAAAAACAGCGGTTGCCAGATACCTGTTTGGA
GGATGAAAAATGAGCAGGTGGCGGAGGCCATCGCAGAGAT
CCACGAAAGCTTCGGTGAGATCAGCTGTCCGTCTATTCCG
TATATAATGCAAGAAGACATTGATCAGTGGTGTTCAGACG
CCAGCAGGTTCGTTAGAAACACAAGGCTCCAAAAGACAAT
ACAGAGTGGCTTTCACCACATCGAGTACAGTAAAAGGCAG
CAGAAAAACGCTGAGAGGCAAGCCCGGCGGAGGCAGATCC
GACATGAGATCGCTCTCGCTCCTCCTGTAAAAATAACTGG
AAGAAAGCTGATCCCACGCAGCCAGCCTCCGAAGGTTGTG
GAGAAAGTAGTGAAGGTTAAGGAAGAGAAGAATTTACTGT
ATTTTTTAAACAATTAACCGGACTGAATTCTCACGTATTG
AAGAAGAAAATGCCTCCGTCTTTCAGTGAAGAATGAGGAA
ATCCTCCTCCTCTTCCTTCACTGAACGACCAACTTCCAAA
ATCCGA

OTTDART00000061107 (1) [ Show ] (double-click sequence to select) [Download]
>tpe|OTTDART00000061107|OTTDARG00000042347|ZDB-GENE-081022-42 zgc:193807|OTTDARP00000047291 CH211-160O17.9-001 LG_ CR318593.16 Danio rerio protein_coding NOVEL, 1646 bp
GCAGATCCTGCTTCGGTGAAAATGGCCCACTATCTGGACG
ATTTTATTGCAGATTTCAAAAAACAAATGCTACAGAGAAC
GAACAGGAGCTGGAGAATCTGCTCATCAGCAACGCTAAAC
TGCGAGAAGAAGTAAAGAACAACCCTGAAGAAAAGGAGCG
TCGTGAGTACTACAGGAGGAAACTTTGGATTAACGACGTC
TATGACACATGTATAAGTGCGGCAGGAATGCCAGCGAACA
CACGGGACCCTCTGGAGCAGTTACAAATGTGTACGAGTTT
TGTTCAAGTTTTCTGATACTTCGTATATTTATGGATCAAA
AAATACAATTTCAACAGCCAAATCCCGTGACATGTGATGC
TGAAGACATGTACAAATACCCGCAAAAACCACCACCTCAT
AGGATGCCCAAAGGCACGCTGGACAGTGTCATGGGTGTAG
TGGAGAGAAGCGCAGTTTTCACCCGTCAGAGGGACATCAG
GCTGCCACCAATCCCTGGCATTAGTCATCATCTTGGGCCA
CCACCCGAGGTCCACCCCAGCCTCGATGCCCAGACACAGA
CTGACATTTATAAACGAATGAGAAGAACCATTAGAGCCAC
CTTATCAGATAAAGCAAAGAAAATTTTACAAAGTCGCTGT
GAACAGCAGAAAAAGAGCAGCATGGGTGTGAGAAAGAAAG
CCACGGTCTCCAGCCGACCAAAGACTGTCAAGCTTCCACC
TAGCTCTGCTCCACCAGTCTCTGTTCCACCTGAACCTGTC
CCACTTACCCCTGTCCCACCTGGCCCTTCCACAGCTACAG
GACTGCCTCCACATCCAGCAGCTCAGATGAGCGAGACTGC
GGTGGACCGAAGCCTCGACACTGGGAAAGACCTTCCAGTC
GTCGAGTCCTCGAAGAAAAAGAGAAACAGACCCCCAAAAG
CCTCAAGGAGAGATGAAGACATGGGATTTGAATTGATGGT
CATTTCTGAGATGTGGTGGGAAATCGCAGACGAAATCAGG
GAAATTGAGGCTAAAAAGGAAAACATCGTGAAGAAGGCAA
ACTGCTTGGAAAAAAGGTTTCATGCCAGTGTTCGCCTCAT
AGCAGAACAGCAGGAGGAAGAAAGGGATCTTAAGCAAATA
TGGCAGAGTAAAAACAGCGGTTGCCAGATACCTGTTTGGA
GGATGAAAAATGAGCAGGTGGCGGAGGCCATCGCAGAGAT
CCACGAAAGCTTCGGTGAGATCAGCTGTCCGTCTATTCCG
TATATAATGCAAGAAGACATTGATCAGTGGTGTTCAGACG
CCAGCAGGTTCGTTAGAAACACAAGGCTCCAAAAGACAAT
ACAGAGTGGCTTTCACCACATCGAGTACAGTAAAAGGCAG
CAGAAAAACGCTGAGAGGCAAGCCCGGCGGAGGCAGATCC
GACATGAGATCGCTCTCGCTCCTCCTGTAAAAATAACTGG
AAGAAAGCTGATCCCACGCAGCCAGCCTCCGAAGGTTGTG
GAGAAAGTAGTGAAGGTTAAGGAAGAGAAGAATTTACTGT
ATTTTTTAAACAATTAACCGGACTGAATTCTCACGTATTG
AAGAAGAAAATGCCTCCGTCTTTCAGTGAAGAATGAGGAA
ATCCTCCTCCTCTTCCTTCACTGAACGACCAACTTCCAAA
ATCCGA

Segment Relationships
Protein Products
No data available
Supporting Sequences
Citations