Transcript

nudt5-202

ID

ZDB-TSCRIPT-141209-321

Name

nudt5-202 Nomenclature History

Previous Names

nudt5-005

Transcript Type

aberrant processed transcript

Annotation Status

nonsense mediated decay

Annotation Method

Ensembl

Associated With Genes

nudt5 (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000160915 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|ENSDART00000160915.2|gene_biotype:protein_coding|ENSDARG00000078073.4 transcript_biotype:nonsense_mediated_decay cdna chromosome:GRCz11:4:7870736:7875760:-1
CAGAATTACTGTAGCTGTTCAGACTGATCAAGATGAGCTC
TCCAACGAAAGCCACCACTACAGAACCTCATGTAATCAAA
GAGGAGTTGGTAGCGAGTGGAAATTGGGTGAAGCTTGAGA
AAACCACTTATGTGGATCCTTCTGGAAGCACCAGAACATG
GGAAACAGTGAAGAGAACAACCCGAGTCGCCAACACTGCA
GCTGATGGTGTGGGAATCATAGCTCTCCTGAAGAGGACTC
TACACAAAGACTGCGTCGTCATGGTCAAGCAGTTTCGACC
ACCCATGGGATGCAACACACTGGAGTTTCCTGCAGCACAA
AGATTGTTATGGTGCATATTAATGGAGACGACATTGAAAA
TATAAACCCCACACAGCAGCTGGGTGATGGAGAATTTGTG
GAGGTTATTCTTTTACCTCTGGATGAATTTCAGCAAAAAA
TTGATGAGCTGCTTCAGAAAGAGAAAATAGTGGTGGACTG
CAAGGTGTACATTTATGCAATGGGAATGTCTCAAGCCTTC
TTTAAACCCAGAGAGCTGCCCGTGCTGAAGCAGTGAATGC
ACAGATCTCTCTTCTGGAATGCAACGAAGACCGTTTTCTG
AGCTGTAACACACTTTTTTGAGCTATTTAGAGAGATGAAA
TCCAGTACTTGACCATGGCTTTCATGTTTTACCACAGTTG
CCTCAACATTCCTAACAAACTAACAGTACTTAATTATCAG
GTAATCAGTGTTTTGCACAGTTTTAGAATTTGTGATAGCA
AATAGGACTTTTTCCTGATAAAATTAAACTAAAGTGTAGG
GT

OTTDART00000051420 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000051420|OTTDARG00000036090|ZDB-GENE-040625-63 nudt5|OTTDARP00000040428 nudt5-005 LG_ BX323869.8 Danio rerio protein_coding KNOWN, 802 bp
CAGAATTACTGTAGCTGTTCAGACTGATCAAGATGAGCTC
TCCAACGAAAGCCACCACTACAGAACCTCATGTAATCAAA
GAGGAGTTGGTAGCGAGTGGAAATTGGGTGAAGCTTGAGA
AAACCACTTATGTGGATCCTTCTGGAAGCACCAGAACATG
GGAAACAGTGAAGAGAACAACCCGAGTCGCCAACACTGCA
GCTGATGGTGTGGGAATCATAGCTCTCCTGAAGAGGACTC
TACACAAAGACTGCGTCGTCATGGTCAAGCAGTTTCGACC
ACCCATGGGATGCAACACACTGGAGTTTCCTGCAGCACAA
AGATTGTTATGGTGCATATTAATGGAGACGACATTGAAAA
TATAAACCCCACACAGCAGCTGGGTGATGGAGAATTTGTG
GAGGTTATTCTTTTACCTCTGGATGAATTTCAGCAAAAAA
TTGATGAGCTGCTTCAGAAAGAGAAAATAGTGGTGGACTG
CAAGGTGTACATTTATGCAATGGGAATGTCTCAAGCCTTC
TTTAAACCCAGAGAGCTGCCCGTGCTGAAGCAGTGAATGC
ACAGATCTCTCTTCTGGAATGCAACGAAGACCGTTTTCTG
AGCTGTAACACACTTTTTTGAGCTATTTAGAGAGATGAAA
TCCAGTACTTGACCATGGCTTTCATGTTTTACCACAGTTG
CCTCAACATTCCTAACAAACTAACAGTACTTAATTATCAG
GTAATCAGTGTTTTGCACAGTTTTAGAATTTGTGATAGCA
AATAGGACTTTTTCCTGATAAAATTAAACTAAAGTGTAGG
GT

Related Transcripts

Transcripts related to nudt5

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	nudt5-202	Ensembl	802 nt
aberrant processed transcript	nudt5-204 (1) Ensembl	Ensembl	1,132 nt	Select Tool ZFIN BLAST
aberrant processed transcript	nudt5-206 (1) Ensembl	Ensembl	776 nt	Select Tool ZFIN BLAST
mRNA	nudt5-201 (1) Ensembl	Ensembl	1,396 nt	Select Tool ZFIN BLAST
mRNA	nudt5-203 (1) Ensembl	Ensembl	888 nt	Select Tool ZFIN BLAST
ncRNA	nudt5-006 (1) Ensembl	Ensembl	546 nt	Select Tool ZFIN BLAST

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations