ZFIN Transcript: pcdh1a4-202

Sequence
OTTDART00000043098 (1) [ Show ] (double-click sequence to select)
>tpe|OTTDART00000043098|OTTDARG00000030999|ZDB-GENE-050202-4 pcdh1a4|OTTDARP00000035254 pcdh1a4-001 LG_none BX957322.7,BX119910.9 Danio rerio protein_coding KNOWN, 5406 bp
TTATAGCAGCTTCAGCGTCGTGTTCTTGGATTCTATATCG
GAAGACGTCAATTTATTTTAATATTTCTTCAAGACATCGA
TGCACATTTTACGGCAAAATAATGAATCTCTCGGAATCTG
TTGGCTTCTTTATACTGTTACTTCTGTCTTTATTGAAATT
TTCCATTGGTCAGACTTCATATTCCGTCTCGGAGGAGGCG
AATAAAGGAACCGTGATCGGAAATATAGCAAAAGATCTCA
AGATAAGTGCTCAGGAACTAGAATCCCGCATGTTTCAGAT
TATGCCTGGATTAAATGCAAAGTATTTTGATGTAAATGTG
AAAACGGGGTCGCTGTTTGTCAAAGACAGGATTGATCGTG
AGGAGTTGTGTGGCGTTAATCAGAAATGTGCACTGAATTT
AGAGGCTCTTGCTCAGAATCCTCACAGACTTTATCGACTT
GAAATTGTAATTGTGGATGTGAACGACAATGCTCCAGTTT
TTCCAAACAGCACATATATTCTTAGCGTTACAGAAAATGC
GATTGAGGGGGACAGATTTCCTCTTCCAGTTGCAAAAGAT
TTAGATGTCGGCAGTAATGCTCTAAAAGACTACAAACTCA
GTTCAAATGAACATTTTTCCTTAGATGTTCATAGCGGGCA
AAGGAGTATATATGCTGAGTTAATACTACAGAAAGCTTTA
GACAGAGAAAAGCAAGCTGTTATTCATTTAATACTAACGG
CTATTGACGGAGGGAAACCTCCAAAATCTGGAACTTTGAG
TATTGTTGTTAATGTTAAAGATATAAACGATAATAAACCT
GTTTTCAGCAAATCTTTATACAAAGTTAAAGTGAAGGAAA
ACACGCCAGTTGGAACTAAAATAATCTCTGTATCAGCCAG
AGATTTGGATGAGGGCATTAACAGCGAAATTCAATATTCA
TTTCTTGGACACGGAAATAACGACGAACTGAACCGTTTTA
CAATTAATACCAATTCTGGAGAAATTACTGTTCAAGGTCA
AATTGATCACGAGGAAGACTCTGCAATTGAACTGCGTGTT
CAGGCAAGTGATAAAGGCAGTCCTTCAAAAAGTACACACT
GTAAAGTTTTAATAGAAGTTGTGGATGAGAATGATAATGC
CCCAGAGATAGTTACAACTCCACTGATGGAAAGTGTAAAA
GAGGACGCAAAATCAGGAACCGCTGTTGCTTTAGTCACAG
TTTCTGATAAAGATATGGGTAAAAACGGCATTTTACATTG
TGCTTTAAAGGGTTCGTTCCCTTTTAAACTGGAGACATCA
TACAATAATCATTATTCTCTAGTGGTAGATGGACCACTGG
ACAGAGAGAGTGTTTCTCAGTATAACATCACTATTACAGC
TGCAGATGAAGGAACTCCGCCTCTTTCCAGCAGCACAGTT
ATAACTGTTCATATCTCTGATGTTAATGACAATGCTCCAC
ATTTCTCAGCACCCGTTATTAACGCTTTTCTAAGTGAGAA
TAGTCAAGCTGGAGGTCTCGTGACAAAAGTGACTGCTGAT
GATTCAGACACTGGTGAGAACGCAGAACTTTCATATTCAC
TGTTAGACAGTTCCAGCTCTAGCATTCCTGTAACAACACT
GATAAATATCAACTCTTTAAGTGGAGAAATATTCAGTTTG
CAATCATTTAATCATGAAGAGACCAAAAGATTTCAATTTC
AAGTTATGGCAACAGACACTGGTGTTCCTCCTCTGAGCAG
TAATGCGACTGTAAATGTGTTTATTCTGGATGAGAATGAC
AACAGTCCAGTTATTTTAGCACCTTATTCTGAACCTGGAT
CAGTTAATACTGAGAACATCCCCTACTCTGCTGAAGCGGG
ATACTTTGTAGCCAAGATCAGAGCCGTTGATGCTGACTCT
GGATATAACGCACTTCTGTCTTACCATCTTACTGAACCCA
AAGGAACTAATCTCTTCCGCATTGGAAGCAGCACTGGAGA
AATAAGGACTAAGAGACGAATGAGTGACAATGACTTAAAA
ACTCACCCACAGATTATTACAGTGTCTGAAAATGGAGAGC
CATCGCTCTCAGCGACTACGTCCATGGATGTTGTGGTTCT
CGAGAGTCTGGATGACATAAAGACATCATTCAGAGAAGTT
CCTGTTAAAGAGGAGAGTTTTTCAGATCTGAATCTGTATC
TGCTCATCGCTATTGTCTCAGTATCAGTCATCTTTTTACT
GAGTCTCGTGGGTTTGATAGCAGCTAAATGCTACAGGACA
GACAGCAGTTTCAGCAGGTACGGCGCTCCAGTGATCAACA
CACATCCAGACGGCAGCTGGTCCTTCTCTAAATCTACTCA
ACAGTACGACGTGTGTTTTAGTTCAGACACAATAAAGAGT
GATGTAGTGGTTTTCCCTTCGCCGTTTCCACCAGCAGACG
CGGAGCTGATCAGCATTAACAGTGAAGATACTTTTACGCG
CACTCAAACTCTTCCTACCAACGAGAAGCCCAAAGGCCCA
AATGCTGACTGGCGTTACTCTGCGTCGCTGAGGGCAGGAG
TGCAGAGTTCTGTGCATATGGAGGAGGCATCAGCTGTGAT
GCAAGGAGCGCAAGGCATGCTGGTCCAGAATTGGCCCACG
GTTTCCAGCGCAGCAGATGGTGAAGGAGAGGGGCAGCTGT
CTCCTCCTGTTGGAGCTGGAATCAACAGTAACAGCTGGAG
CTTCCGCTATGGTGCGGGCCCCGGATACGGCCCTCCACAA
GCCCTAAAGCCGGGAGAGATTCCCCCTGAAGCCTTCATCA
TTCCCGGCTCTCCGGCCATCATCTCCATCCGGCAGGACCC
AGGTGCCGTGGATGATAAGGGCGAGTTCATCACTTTCGGG
AAGAAAGAGGAGTCTAAGAAGAAGAAAAAGAAGAAGAAGG
AAAAGAAGGACAAGAAGGATAAAGGGAAAGATGATGGCGA
GGAGTAATGAAGAACGTCCCACTACAATATTAAAGCTATC
AACTTGCGTTTGTAGCAAATAATGACAGAAAGAGAAAACC
AAAAATACTGAAAACATTAAGAGAGGAGAAAATTCCTTCA
ATATACCATATCTACAAAGTCCAGGCTGAAAAGAGTTTGC
TCTATGTGCAGACACATATAAATAACACAAATTATCCCAG
TGAACATTTACATGACTATAATTGGCTATTTTTATAGTTC
TAACCCATCTAAGAAAGACTCTGCAGTCTACAAAATAAAA
AAACCCAGCCCACTCACGCCTTGTAAATGATATTTTCATC
CACAGCAAAGGATGTCCCTCTCTCTTAAAAGGATCAAACT
AATTTCCAGTTAAACTGGATATGAACTCATCCAAGAGTTT
TCTCTGCCTTCGTCCCTCATCTTCATATGGGAAAGAAACA
ACCTCCCCGGGCCCCCATCTCACGTCTTGATCTGCAAGGA
ATAAAACTTTCCAGACACAAATTTGACTGCACCTTCACCA
AAAAGACCGGTGTCTGATTTCTATAGCAGATCTAAAAGTA
AGAGATAGGAATGTAGCAGTCAAATCAACTCCTGAAATAT
TCTAGAAAAGAACAAAGAGATCGCTACTGATTCTGCTCCC
GAACAAATCTCAGAACGACACTTTACTCAGCATTTTTTGT
AAGAGCAATCCAATACTCTAATACAATCCAAAATTATGCA
CATCCAAGATATGTAGAAATACAAATCGAAAAATATGATG
CATAAACCTAGAGATTGTTGCTCTCTAAAGCATTACAGGC
TGTCCGCACACTGGACAGCTAAAGGACTGAAGCACAACAG
CCTCTCAAAAGTCTGTAAAATAGTGCTCATCGCTTCATTT
AAAAAAAAGTCAACTTCCTTTGCTGCAGTTTTGAATGTCT
GATAGCCGTCATCCCACTTTCCGCCAGCTTTAAGTCTTAT
TCCAGCTACTTTCCAACAGCTTACACCCTTTGCATCTCTG
ATGATATCCGAGTTTGTTCCCTAAGTCTGTAGACACTGTA
CAAAAGGTGCTTGTTGCTTCATTTCAAAACTCACTAAATT
GATTTGCTGCCGTTTTGAATGTTTGATAGGCGTCATCTTA
TTTCGTCCCATCTGTATAATCATAGTCCAGCTACTTTTTT
TCCTACAGCTTGTAACTAACATTGCCATCCTCCCTTTATC
AGATGTGCTGTGCTGGCCTCATGTCAGTACTGCCCCCTGG
TGGTGCGTGTAGTATAATGTAACAGGAAAGAGCAGAAAAA
AAGCCACTCCTTCTGCAGGACACATAAGCACATGTACTGG
CCCCTACATTCAAGTATAAATTCAATATACACCCGTGTTT
ATGCTTTGACAGCAGTGGAGCTAACCGTGGACTATGCAGC
TATGCTTATGGAGAAGTTTAGCCATGGCGTATGGTGCTTT
CTAGAACGATGATAGAGGGTTAGCGGAGATTAGACTGAGG
AACTATAGCAGAGGGCAGTATAGAGTTTTTCTACTGTATA
TAATTATTGTCGAAACATAGCTTCATGACATTTTTGTAAA
TAATGGGAACATTTTCTTAACATTCTGACATCATGATTAA
GGTTTCAGTTTGTTTTCGTTCTTTTTTTAGAGGGAGCACA
TCTCTTCTTTTCTTTAAATATACTGTTAAGTAAAGGAGAG
ATGTTTGTGCTGCTATGAGGCCGTTTCATCACACATACAC
ACACACACGCACACAGACACACACTCCAGTCTCTTTCAGG
TGTGGTTCAGTGCTGTCAGATCACCAAGTGACTGTTTTGC
ATGTTAAACGCAATTAAAAACAGAAATTATATATAGATAT
TAATGAACAGATATGTTTTTTCATAATTATTTTTTTTCTC
GTGTATAACAGAACCGGAGATGTGCATCATCTCTGCTTAA
GTATGGAAATATAAATCAGATTATTCACGCAGACATACAC
TGATTGCATACATGAAGTGAGCGTAAAAAGAAGACACAGA
AACGATGTCGGCTCTGTGGCGGTCAACATTGACATTTACA
TTCTAGGTATATGTAATGCTGTAGTGTTATGGTCTAAATT
GCTTTTCTTTAAGATCTTATGATTTTTTGCAACTTGAAAG
GATCAATCCTTTGTTTTGTGCTAGGCTTTGAAATCAATAA
CACTGTAATGTGAAACAGTTCATACGTCCCTATGATATAA
ACCTCTCCCTTCAACAACAAAATGATAAAAAAAAAATTAC
AAAAATTTCAAAAACGATAAAAGAGAAAATAAAAAGGTCT
ATGTATTCTGCTTGTGTGTGGTAATTATATATCAGCTCAT
GCAGTGCCTAGGTGGCACTAAGCTTTTGACTTTGACAGTG
CAAATCTGTTGGACTTTTTTGTACACCTGCTCATCAGTGT
AATGGTGTTTATTATTTTATATTACTTTAAGAAATCTGGT
AATGTGTTTTGTTTATAAATCACAAATAAAGTTTTCTTTC
ATAAGT
Related Transcripts
Transcripts related to pcdh1a4
Type	Name	Annotation Method	Has Havana Data	Length (nt)	Analysis
mRNA	pcdh1a4-201 (1) Ensembl	Ensembl		5,710 nt	Select Tool ZFIN BLAST
mRNA	pcdh1a4-202	Ensembl		5,406 nt
Segment Relationships
Protein Products
No data available
Supporting Sequences
Citations