Transcript

pank4-202

ID

ZDB-TSCRIPT-141209-2084

Name

pank4-202 Nomenclature History

Previous Names

pank4-006

Transcript Type

aberrant processed transcript

Annotation Status

nonsense mediated decay

Annotation Method

Ensembl

Associated With Genes

pank4 (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000158711 (1) [ Show ] (double-click sequence to select)

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>tpe|ENSDART00000158711.2|gene_biotype:protein_coding|ENSDARG00000098453.2 transcript_biotype:nonsense_mediated_decay gene_symbol:PANK4 cdna chromosome:GRCz11:11:15886970:15902195:1
GGACAAAGAAGATGAAATGACTTGTCTGATTAAAGGATGC
AACTTTGTTCTGAAGAATATACCCCATGAAGCTTTTGTGT
ATGCCAAGCATGCTGATTCTGAATTTCGGTTTCAGAATAC
ACACCCAGATATCTTCCCTTACCTACTTATAAATATTGGC
TCTGGAGTCTCAATAGTAAAGGTTGAATCAGAGGACAAGT
TTGAGCGCATTGGTGGGAGTTCTATAGGTGGTGGCACTTT
TTGGGGTCTTGGAGCTTTACTCACAAAAACTAAGAGGTTT
GATGAACTTCTTCAGTTAGCTTCAAAGGGACAACACACAA
ATGTGGATATGCTTGTTAAAGATATCTATGGAGGTGCTTA
TGGGTCCCTAGGTTTAACTGGGGACCTGATTGCAAGCAGC
TTTGGAAAATCAGCCACCACAGACAAAGGGGGAGGTCCAG
GCATTATTTCTAAGACATGAAGGATATCTTGGTGCTATTG
GGGCCTTTTTGAAGGGGGCAGAGGAAGATAACCCTAACCA
GTACAGCTGGGGAGAGAACTATGCTGGCAGCTCAGGTCTC
ATGAGTGTATCTCCAGAGTTAAATCCAGTGCAGCGAGCTC
GTAGCGGAACGTTTGACATGTTGGAAATGGACCGTCTGGA
AAGACAGCTAGTGAACCTCCCCCTGCTGCATGACCCAACC
TCTTATATCCCAGACACTGTGGACCTGACGGAAGATGCTT
TGGCTCGGGATTATTGGCTCTACTGCTTTGAGGATGCGCT
AGATGGGGTGGTGAAGCGGGCGGTGGCTAGTCAAAAAGAC
CAACCAG

OTTDART00000061100 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000061100|OTTDARG00000042245|ZDB-GENE-040426-1592 pank4|OTTDARP00000047288 pank4-006 LG_ FP003590.14 Danio rerio protein_coding KNOWN, 807 bp
GGACAAAGAAGATGAAATGACTTGTCTGATTAAAGGATGC
AACTTTGTTCTGAAGAATATACCCCATGAAGCTTTTGTGT
ATGCCAAGCATGCTGATTCTGAATTTCGGTTTCAGAATAC
ACACCCAGATATCTTCCCTTACCTACTTATAAATATTGGC
TCTGGAGTCTCAATAGTAAAGGTTGAATCAGAGGACAAGT
TTGAGCGCATTGGTGGGAGTTCTATAGGTGGTGGCACTTT
TTGGGGTCTTGGAGCTTTACTCACAAAAACTAAGAGGTTT
GATGAACTTCTTCAGTTAGCTTCAAAGGGACAACACACAA
ATGTGGATATGCTTGTTAAAGATATCTATGGAGGTGCTTA
TGGGTCCCTAGGTTTAACTGGGGACCTGATTGCAAGCAGC
TTTGGAAAATCAGCCACCACAGACAAAGGGGGAGGTCCAG
GCATTATTTCTAAGACATGAAGGATATCTTGGTGCTATTG
GGGCCTTTTTGAAGGGGGCAGAGGAAGATAACCCTAACCA
GTACAGCTGGGGAGAGAACTATGCTGGCAGCTCAGGTCTC
ATGAGTGTATCTCCAGAGTTAAATCCAGTGCAGCGAGCTC
GTAGCGGAACGTTTGACATGTTGGAAATGGACCGTCTGGA
AAGACAGCTAGTGAACCTCCCCCTGCTGCATGACCCAACC
TCTTATATCCCAGACACTGTGGACCTGACGGAAGATGCTT
TGGCTCGGGATTATTGGCTCTACTGCTTTGAGGATGCGCT
AGATGGGGTGGTGAAGCGGGCGGTGGCTAGTCAAAAAGAC
CAACCAG

Related Transcripts

Transcripts related to pank4

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	pank4-202	Ensembl	807 nt
mRNA	pank4-201 (1) Ensembl	Ensembl	1,884 nt	Select Tool ZFIN BLAST
mRNA	pank4-203 (1) Ensembl	Ensembl	892 nt	Select Tool ZFIN BLAST
mRNA	pank4-204 (1) Ensembl	Ensembl	872 nt	Select Tool ZFIN BLAST
mRNA	pank4-205 (1) Ensembl	Ensembl	572 nt	Select Tool ZFIN BLAST
mRNA	pank4-206 (1) Ensembl	Ensembl	1,667 nt	Select Tool ZFIN BLAST

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations