Transcript

ckap5-004

ID

ZDB-TSCRIPT-131113-967

Name

ckap5-004 Nomenclature History

Previous Names

None

Transcript Type

ncRNA

Annotation Status

retained intron

Annotation Method

Ensembl

Associated With Genes

ckap5 (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000161341 (1) [ Show ] (double-click sequence to select)

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>tpe|ENSDART00000161341.2|gene_biotype:protein_coding|ENSDARG00000102674.2 transcript_biotype:retained_intron gene_symbol:ckap5 cdna chromosome:GRCz11:25:13749440:13751398:-1
TTTTTTTAAAGTGTTAAATAAGTTTTAAAATTGAACTTAT
TATTGCATTTTGAACAGCTGACTCTTGATATTTACAAACC
AAATTTACTGCAACTCTAAGTTATAGTGACCAACCAACAG
TCAAAGACATTTTATTAGCTGGTCATCTTTTGTTTTTTAA
AGTCATGTACTGTATTTAACACTTTAAATTGGGTTGAGAA
TTCAGAAAAATGACCATTCAATAGTTTTAAAACAACTTTG
AAGGTTTTGATAGACTACTATAGAATAAAATTATCCAATA
TAATATTTTTGCGCCGAAAAATTGAGTTTTATAAAAAACA
CAAACTTTGATTTTTAGTAGTCTCCAAGTAATTGAAGAGT
AGCTGAAATGTTTTACTTTCCAAGGCAAAATTTTTTTTGT
TACTTTATACTGAATTTCAATTATTAAGGTTACTTTTTCC
ATCGCAGCATAAATCAGTTTATTAAGTCTTGCTTCTAAAT
TCTCTCCAAACATCAAACATCAACTTCTCTGTCTTACTCA
GTGTCTATGGAGAATGATCCGTTTCCTACCCCAGACCATC
AACAGTATTAATCTGGATCGTATCCTGCTGGACGTGCACA
ATTTCATGAAGGTTTTCCCTAAAGAGAAGCTGAAGCAACT
GAAGAGTGACGTTCCTCATCGGACACTGAAGACACTGCTG
CACACGCTCTGCAGACTCACAGGCGCCAAGATATTAGACC
ACCTGTCCATGATCGAGAACCGCAATGAGTCAGAGTTGGA
AGCGCATCTGA

OTTDART00000056462 (1) [ Show ] (double-click sequence to select)

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>tpe|OTTDART00000056462|OTTDARG00000039325|ZDB-GENE-051120-174 ckap5|no_translation ckap5-004 LG_ FP236801.8 Danio rerio protein_coding KNOWN, 771 bp
TTTTTTTAAAGTGTTAAATAAGTTTTAAAATTGAACTTAT
TATTGCATTTTGAACAGCTGACTCTTGATATTTACAAACC
AAATTTACTGCAACTCTAAGTTATAGTGACCAACCAACAG
TCAAAGACATTTTATTAGCTGGTCATCTTTTGTTTTTTAA
AGTCATGTACTGTATTTAACACTTTAAATTGGGTTGAGAA
TTCAGAAAAATGACCATTCAATAGTTTTAAAACAACTTTG
AAGGTTTTGATAGACTACTATAGAATAAAATTATCCAATA
TAATATTTTTGCGCCGAAAAATTGAGTTTTATAAAAAACA
CAAACTTTGATTTTTAGTAGTCTCCAAGTAATTGAAGAGT
AGCTGAAATGTTTTACTTTCCAAGGCAAAATTTTTTTTGT
TACTTTATACTGAATTTCAATTATTAAGGTTACTTTTTCC
ATCGCAGCATAAATCAGTTTATTAAGTCTTGCTTCTAAAT
TCTCTCCAAACATCAAACATCAACTTCTCTGTCTTACTCA
GTGTCTATGGAGAATGATCCGTTTCCTACCCCAGACCATC
AACAGTATTAATCTGGATCGTATCCTGCTGGACGTGCACA
ATTTCATGAAGGTTTTCCCTAAAGAGAAGCTGAAGCAACT
GAAGAGTGACGTTCCTCATCGGACACTGAAGACACTGCTG
CACACGCTCTGCAGACTCACAGGCGCCAAGATATTAGACC
ACCTGTCCATGATCGAGAACCGCAATGAGTCAGAGTTGGA
AGCGCATCTGA

Related Transcripts

Transcripts related to ckap5

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	ckap5-202 (1) Ensembl	Ensembl	3,185 nt	Select Tool ZFIN BLAST
mRNA	ckap5-203 (1) Ensembl	Ensembl	6,248 nt	Select Tool ZFIN BLAST
mRNA	ckap5-204 (1) Ensembl	Ensembl	3,175 nt	Select Tool ZFIN BLAST
mRNA	ckap5-205 (1) Ensembl	Ensembl	6,161 nt	Select Tool ZFIN BLAST
ncRNA	ckap5-004	Ensembl	771 nt

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations