Transcript

sv2-202

ID

ZDB-TSCRIPT-131113-932

Name

sv2-202

Previous Names

sv2-002
dkey-279i2.1-002

Transcript Type

aberrant processed transcript

Annotation Status

nonsense mediated decay

Annotation Method

Havana

Associated With Genes

sv2 (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

OTTDART00000056332 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000056332|OTTDARG00000039245|ZDB-GENE-000607-80 sv2|OTTDARP00000048647 DKEY-279I2.1-002 LG_ AL929134.21 Danio rerio protein_coding NOVEL, 1594 bp
ACAGAAGTACAGCAGAAAATTCCGTCTTCCGCTTTGCGAT
CATGTAGTTTACACTCGTAATTCTTTGATTATAAATATTA
ATATGCCTCGACAGTCTCGTGAGGATACAGAACCTCTGCT
ATCGTCCGCTAATAATGAGGAAGACGATGAGCAGGCGTCC
TGCAGAAAGAAACTTACATATGAGGAGGCTGTTGAGAAAG
CAGGGTTTGGTCTCTTCCATTGGCTGCTGTTGGTAGTCTG
TGGATGGGCAAACGCCAGCGATGCGGTGGAGATCCTGTGT
GTGTCGTTCCTGCTGCCCACGGCCCGCTGTGATCTCCAGC
TCAGCTCGGCCGACATGGGCATCCTCACCGCCAGCATCTT
TCTAGGGATGATGGTGGGCGGTTGTGTTTGGGGGTTTCTG
GCTGATCGCAGAGGAAGGCGGAGCGTCCTGGTGGTTTCTC
TGGCTGTCAATGGCACATTCGGGGCGGTGGCCAGTTTGGC
ACCAACTTTCTGGCTCTTTCTGCTCTTGCGGTTCTTCAGT
GGAGTCGGGGTCGGCGGCTCCATTCCTGTCATCTTCTCCT
ATTTTTCGGAGTTTCAGCCGTGTTTGCGGAGGGGGGCGAT
GATTAGTGCTCTGGCAACCTTCTGGATGGCTGGAAATATT
TTAGCTGCAGGCCGGACGTGAGATGGAGGCTTTGTCTGTG
TTCCAGAAGATATACAAACTGAACAACAGAGGTGCCACAA
AACCATTTCCTGTATCAGGGCTCATGATCAGACCTAAAGA
TGATGAAGTGAAAAACAGACCCAGCCACAGCAGCTCAAGA
TCACAGCGCTTCATCAATCAGCTCACACAGGCTCTGGTCC
CGCTGAAACAGCTGTTTGTCAGACCGCTGGCTTCCAGAAG
TGTCGTTCTAGTGATCATCTTTTTCTGCATCTCATTTGGG
TATTATGGGTTATGGATGTGGTTTCCGGAGCTTTTCAAGA
GGGCAGAAGATGGAGGTTCTCCATGTGCAAACATGTCTCG
AGCCCAAAACGCAGAGAACGAAAAGTGCTATCCAGTCAAA
ACCGCAGTGTACATGGAGGGGTTTATAACGGCGGCTTCAA
ACTTGCCAGGAAACATCTTCACTATTCTCCTCATGGACAG
AATCGGCGGGAAAATCCTTTTATCCGTTAGTTTGCTGGTG
TCCGGCGTGAGTGTGTTCGTCATTTACGTGGTGAAGACTA
AAACTCAGAGTCTGATCGTGTCCTGTGTGTTCAGTGGTGT
TTCTGTCATCTCCTGGAACGCTCTGGATGTCGTGGGGACA
GAACTTTACCCTACACAACTACGCTCCTCGGCTCTGGGGG
TCTTCACTGGAGTGGGTCGAGTGGCAGCCATCATGGGCAA
TGTGGTTTTCGGGCAGCTGGTGGACTCGAGCTGTGCCGTT
CCTCTGCTGATGGTGTGTGTGCTCCTGCTGGCGGGAGGAC
TGGCAGCTCTGTGGCTGCCTCAAACTAAACAGACTCAACT
CACATGATGCACACACACACACACATAGGCATTAAAAGAG
ATACAGTTGAAGTCAAAATGATTAGCCTTCCTGTAAATTA
TTTTGTCTTCAAATATTTCCCAAATGATGTTTAA

Related Transcripts

Transcripts related to sv2

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	sv2-202	Havana	1594 nt
mRNA	sv2-201 (1) Ensembl	Havana	1795 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations