Transcript

smurf1-201

ID
ZDB-TSCRIPT-131113-7
Name
smurf1-201 Nomenclature History
Previous Names
  • smurf1-001
  • wwp1-001
Transcript Type
mRNA
Annotation Status
Annotation Method
Ensembl
Associated With Genes
Strain
TU
Non Reference Strain
Genome Resources
RNA Central
None
Note
None
Sequence
ENSDART00000004923 (1) [ Show ] (double-click sequence to select) [Download]
>tpe|ENSDART00000004923.9|gene_biotype:protein_coding|ENSDARG00000016086.11 transcript_biotype:protein_coding gene_symbol:smurf1 cdna chromosome:GRCz11:3:40690212:40768548:-1
GTTAGCCTGTGTTGTTAAGTCTGAAAGCTACAGGGGATTT
GCCAGACGGAAATAATACCGTTTTATCGCCGAGAAACACA
TGCACAGGCCACACGATCGCGTCGCGTGTTTTTATACGTT
TTTATATCCTCGTGAAGCGAGCGTCTTGGGTTTATCCTGA
GAGAAAGTTCGTTGGTTTTTTTGTGGGAGTGATGTCGAAT
CCTGGGACTCGAAGGAACGGGTCAAGCATCAAAATCCGAC
TGACAGTATTATGTGCCAAGAATCTAGCAAAGAAAGACTT
CTTCCGGTTGCCTGATCCTTTTGCCAAAGTGGTGGTGGAC
GGCTCGGGTCAATGCCACTCTACAGACACGGTCAAAAGCA
CACTGGACCCCAAGTGGAATCAGCATTACGACCTGTATAT
TGGGAAGACCGATTCCATCACCATTAGCGTATGGAACCAT
AAGAAGATCCATAAGAAGCAGGGTGCGGGATTCTTAGGCT
GCGTGCGGCTCTTGTCAAACGCTATCAGCAGACTAAAAGA
CACAGGCTACCAGCGTTTAGACTTATGCAAGTTAAACCCA
TCTGACAGTGATGCTGTCCGTGGACAAATCGTTGTGAGTT
TGCAGACCAGAGACAGAATTGGCAGTGGAGGGCCTGTGGT
GGACTGTCGAGGACTGGTAGAGAATGAAGGGCCAGTCTTT
GAAGACTCGGGACCCGGACGGCCTCTCAGCTGCTTCATGG
AGGAGCCCATGCCATACACCGATCCCACAGGAGCCGCTGG
AGGGGGCAACTGCCGTGCACTTGAGTCACCCAATCAGGAA
CAACGGCTCCAAGCACAACGCATCAGAAACCAGGATTCCC
GAGGGCACACGCACACCCCCCAGAATCGACCGCACGGACA
CCAATCCCCCGACCTCCCTGAGGGCTATGAGCAAAGGACC
ACCGTGCAGGGCCAAGTCTATTTTCTGCACACACAGACTG
GCGTGAGCACCTGGCACGATCCCAGAATACCCCGGGATTT
GAACAGCGTGAGTTGTGAGGAGCTGGGCCCACTGCCGCCC
GGCTGGGAGATCAGGAGCACTGTGTCAGGACGAATTTATT
TCGTCGACCACAATAATAGAACCACGCAATTCACCGACCC
CAGGTTACACCACATCATGAGCCAACACTCTCAGGTGAAG
GAGTCGAGCCAGGCTCTGCCCGTGCAGATGGAGGTTGGCA
TGGAGGAGGGTGATGGAGAGTTGCCGGTGCGCTACGAAAG
AGATCTTGTCCAGAAACTCAAAGTTCTCCGGCATGAGCTC
TCGCTGCAGCAGCCTCAGGCCGGCCACTGCCGCATAGAAG
TGTCCCGCGAGGAGATCTTTGAGGAGTCTTATAGGCAGAT
CATGAAGATGAGACCCAAAGACCTGAAGAAGCGGCTGATG
GTGAAGTTCAGAGGCGAGGAGGGGCTGGATTACGGAGGAG
TTGCTAGGGAGTGGTTATATCTGCTCTGCCATGAGATGCT
GAATCCATACTATGGCTTGTTTCAGTACTCGACCGATAAC
ATCTACACACTACAGATCAACCCAGACTCCTCCATTAACC
CTGATCACTTGTCTTACTTCCACTTTGTTGGGCGGATTAT
GGGTCTGGCTGTTTTCCACGGGCACTACATTAACGGGGGC
TTCACCTTGCCCTTCTACAAGCAGCTCCTGGGGAAACCCA
TTCAGCTTTGTGACCTTGAGACCGTGGACCCAGAGCTGCA
CAAGAGTCTCGTCTGGATCCTAGAAAATGACATCACATCT
GTTTTGGACCACACCTTCTGCGTAGAACATAATGCTTTCG
GCAAGTTCCTCCAACATGAGCTCAAACCAAATGGCAAGAA
CATCCCAGTCACAGAGGAGAACAAGAAAGAATACGTGAGG
CTGTACGTCAACTGGAGGTTCATGCGAGGCATCGAGGCAC
AGTTTCTTGCCCTGCAAAAGGGCTTCAACGAACTCATACC
GCAGCATCTGCTCAAGCCTTTCGACAACAAGGAACTTGAG
CTGATCATCGGTGGTTTGGGGAAGATCGATCTGAACGACT
GGAAGGCCAACACGCGGCTGAAGCACTGTGTGGCTGACAG
CAACATCGTGAAGTGGTTTTGGCAGGCGGTGGAGTCGTTT
GACGAGGAGAGGAGAGGCAGACTCTTACAGTTCGTGACAG
GCTCCACACGCGTCCCTCTACAAGGCTTTAAAGCACTGCA
AGGTTCTACAGGTTCTGCAGGACCAAGACTCTTCACTATT
CATTTAATTGATGCCAACACAGACAACCTGCCCAAAGCCC
ACACATGTTTCAACCGTATCGACATCCCGCCTTACGAGTC
GTACGAGAAGCTGTATGAAAAGCTCCTGACAGCAGTGGAG
GAGACATGTGGTTTCGCAGTGGAGTGAGCAAGCGCCCTGT
CCAGCCAGCCAGCAATGGCAGCAAAAGCCACCAAACAGCC
CCTGCCACCCTCTCACACCCCTCCCCTTCTGCAGGACAGA
CGGACTGGTGTCTCCCGACAGACTTTAGCATCACACTGCA
GTGGAGGGCAGCGAACACCCTAGGTGTTTCAACTCATTGA
CTAATGGTTTTGGCATTACCACAACGAGTTCCAGAGGAAA
TGTAGTTTCTCAACAATGCAGTTGGTATCGTCTTTGTCAC
TGAAGCGGCGGGTTGATGCGCGAGTGTGTTTGTGCTGCAG
TACATAGAGCCTCGCTGAGCCCGTGATCTACTTGAAGTAG
AGCTCACGTTTTTTTTAGTCTAGGGGGAGGATTTTAACAC
ACACACACACACTCAGAGCCTGTGACCGTTAAACCAGTTT
ACCTACAGAAAAATGTGTCTCAAAGGACAAGGCTTGCGTT
TGTCATGCTCGATGTATGTAAACGTCTCCAATTGTTTTCC
TTTTTTTTTTTTTCCCCTTGCGTCCCGTTTAGTGCTATAG
GATGACATTTCAGTGGTATCCATTTCCTGTGCTCTTCAGT
TCTCATTGTAGAAATTTTAACTCGATTGCTTGAAATGTAT
TGTTGAAATGATTATTACTATTATTTTTGTGTCTAAGATC
AAGAACATGCTTGACGGCGAGTCTTAGTCCTGTTGTGGGA
ACTGAATGTACCAGCGCCCATGTGTTCATGTTGAAGCACA
ACCATCGTGTGCGGTCGAAACACCAAATGTTCTCACGGAG
TTACAGTATTTTTGTCGCAGAACTTCTTTTAACCCTTTTT
TTTTTTTATCCAATGTAAGCAAAACATTTGAATTTGAAGC
ATGTCACCTTCTCCAATGGCGTTCGGCTTCTTAAACCGAA
CTCGTAAGAAGATCAGATGCTTTAAAGAAGCTCTTCTTGT
CCTTAATTTTGATGGACCCCGTTAATCTTTTCCAAATGAT
TATTATATGGTAAGCATTAACCGTTTTAACCTACCGTAAA
CTTGACTGTTATTTGCTTGTTTCGTTGATCAAAACCACTG
CTTCGTGGAACATTCGGCACTTCCGCTGGCACATGTACGA
TCGGAGTGGACGAATGCTTCGCTCCTAGACTCTGACGGAG
AGGCTTTTCTGGTTTTGGTGTGCTGAAAGAGCAGGGAAGT
GTTCAAGATTTCATTATGTAGTGCTTGACGTGCATGGCAC
CAGATTATTCTTTGTAAATGTAAAGGATGAGCCAACCTCA
TGGTGTTTCTTCAACCACTTTTGTCCTTTTTCTTTTCCTC
CTAATTTTTTTTAACCAATTATTTATTACCATGTAATGTC
TTTTTAAGTATTGCTGCTATTACCATTATTCCATAGTTTT
CAGAGAAAGCTGAGTTCTTGTGAAAGCTGTACACTAATCT
CTTTTATTTTATGTATGAATCAAAGTATTTAAACCTGCTG
CTGATTCTTCAGGAGGTTAAGAGGATCGGTTCGCCTGATC
TTTTGACCTGGATGGAGTTGGCGAGTGATGTAGGCCAGGC
CCCGGTGGTCATGTTCATATTTGTGATATATGCAATAAAA
TCCATCACCTTTTTATTCTTGGTTCTGTCTTACAATGTCT
TCTTCCTCACTTCAGATCGGTTGGGATGTGTCTTTGACGA
GTGTGCAAAAATGAAGTTTTCCAATTTTCCAAAAGACCGT
GAATGCCTACAGTGGTGAACCGTTTTTAAAACTTGCATAC
AACACAAGAGAGGTGATGTTTAATGTTGTGTAATTGTGGG
AATGGCTAGTGAGCTTGAAGATGAGTCTGGACTTTGCCTG
AAGTTACAGTTGTTTTCATTTTTCTCTAAGAAAAAACTTT
TTTTTTTTTTTTTTGGAGTAATGTGACCAGTATCATCACA
TTGTACAATTATTAGGTCCTGAGTGTCATTGTTTATTCGA
TGCAAGAGTAATGTAACTTACTATGTACTAAACATTTCTG
AAACAAATTCAGTGTAAATAAGATTATATTAAAGAAACTA
AATTGCAAA

OTTDART00000022030 (1) [ Show ] (double-click sequence to select) [Download]
>tpe|OTTDART00000022030|OTTDARG00000018214|ZDB-GENE-040426-2744 smurf1|OTTDARP00000018506 wwp1-001 LG_ BX649559.12 Danio rerio protein_coding KNOWN, 4409 bp
GTTAGCCTGTGTTGTTAAGTCTGAAAGCTACAGGGGATTT
GCCAGACGGAAATAATACCGTTTTATCGCCGAGAAACACA
TGCACAGGCCACACGATCGCGTCGCGTGTTTTTATACGTT
TTTATATCCTCGTGAAGCGAGCGTCTTGGGTTTATCCTGA
GAGAAAGTTCGTTGGTTTTTTTGTGGGAGTGATGTCGAAT
CCTGGGACTCGAAGGAACGGGTCAAGCATCAAAATCCGAC
TGACAGTATTATGTGCCAAGAATCTAGCAAAGAAAGACTT
CTTCCGGTTGCCTGATCCTTTTGCCAAAGTGGTGGTGGAC
GGCTCGGGTCAATGCCACTCTACAGACACGGTCAAAAGCA
CACTGGACCCCAAGTGGAATCAGCATTACGACCTGTATAT
TGGGAAGACCGATTCCATCACCATTAGCGTATGGAACCAT
AAGAAGATCCATAAGAAGCAGGGTGCGGGATTCTTAGGCT
GCGTGCGGCTCTTGTCAAACGCTATCAGCAGACTAAAAGA
CACAGGCTACCAGCGTTTAGACTTATGCAAGTTAAACCCA
TCTGACAGTGATGCTGTCCGTGGACAAATCGTTGTGAGTT
TGCAGACCAGAGACAGAATTGGCAGTGGAGGGCCTGTGGT
GGACTGTCGAGGACTGGTAGAGAATGAAGGGCCAGTCTTT
GAAGACTCGGGACCCGGACGGCCTCTCAGCTGCTTCATGG
AGGAGCCCATGCCATACACCGATCCCACAGGAGCCGCTGG
AGGGGGCAACTGCCGTGCACTTGAGTCACCCAATCAGGAA
CAACGGCTCCAAGCACAACGCATCAGAAACCAGGATTCCC
GAGGGCACACGCACACCCCCCAGAATCGACCGCACGGACA
CCAATCCCCCGACCTCCCTGAGGGCTATGAGCAAAGGACC
ACCGTGCAGGGCCAAGTCTATTTTCTGCACACACAGACTG
GCGTGAGCACCTGGCACGATCCCAGAATACCCCGGGATTT
GAACAGCGTGAGTTGTGAGGAGCTGGGCCCACTGCCGCCC
GGCTGGGAGATCAGGAGCACTGTGTCAGGACGAATTTATT
TCGTCGACCACAATAATAGAACCACGCAATTCACCGACCC
CAGGTTACACCACATCATGAGCCAACACTCTCAGGTGAAG
GAGTCGAGCCAGGCTCTGCCCGTGCAGATGGAGGTTGGCA
TGGAGGAGGGTGATGGAGAGTTGCCGGTGCGCTACGAAAG
AGATCTTGTCCAGAAACTCAAAGTTCTCCGGCATGAGCTC
TCGCTGCAGCAGCCTCAGGCCGGCCACTGCCGCATAGAAG
TGTCCCGCGAGGAGATCTTTGAGGAGTCTTATAGGCAGAT
CATGAAGATGAGACCCAAAGACCTGAAGAAGCGGCTGATG
GTGAAGTTCAGAGGCGAGGAGGGGCTGGATTACGGAGGAG
TTGCTAGGGAGTGGTTATATCTGCTCTGCCATGAGATGCT
GAATCCATACTATGGCTTGTTTCAGTACTCGACCGATAAC
ATCTACACACTACAGATCAACCCAGACTCCTCCATTAACC
CTGATCACTTGTCTTACTTCCACTTTGTTGGGCGGATTAT
GGGTCTGGCTGTTTTCCACGGGCACTACATTAACGGGGGC
TTCACCTTGCCCTTCTACAAGCAGCTCCTGGGGAAACCCA
TTCAGCTTTGTGACCTTGAGACCGTGGACCCAGAGCTGCA
CAAGAGTCTCGTCTGGATCCTAGAAAATGACATCACATCT
GTTTTGGACCACACCTTCTGCGTAGAACATAATGCTTTCG
GCAAGTTCCTCCAACATGAGCTCAAACCAAATGGCAAGAA
CATCCCAGTCACAGAGGAGAACAAGAAAGAATACGTGAGG
CTGTACGTCAACTGGAGGTTCATGCGAGGCATCGAGGCAC
AGTTTCTTGCCCTGCAAAAGGGCTTCAACGAACTCATACC
GCAGCATCTGCTCAAGCCTTTCGACAACAAGGAACTTGAG
CTGATCATCGGTGGTTTGGGGAAGATCGATCTGAACGACT
GGAAGGCCAACACGCGGCTGAAGCACTGTGTGGCTGACAG
CAACATCGTGAAGTGGTTTTGGCAGGCGGTGGAGTCGTTT
GACGAGGAGAGGAGAGGCAGACTCTTACAGTTCGTGACAG
GCTCCACACGCGTCCCTCTACAAGGCTTTAAAGCACTGCA
AGGTTCTACAGGTTCTGCAGGACCAAGACTCTTCACTATT
CATTTAATTGATGCCAACACAGACAACCTGCCCAAAGCCC
ACACATGTTTCAACCGTATCGACATCCCGCCTTACGAGTC
GTACGAGAAGCTGTATGAAAAGCTCCTGACAGCAGTGGAG
GAGACATGTGGTTTCGCAGTGGAGTGAGCAAGCGCCCTGT
CCAGCCAGCCAGCAATGGCAGCAAAAGCCACCAAACAGCC
CCTGCCACCCTCTCACACCCCTCCCCTTCTGCAGGACAGA
CGGACTGGTGTCTCCCGACAGACTTTAGCATCACACTGCA
GTGGAGGGCAGCGAACACCCTAGGTGTTTCAACTCATTGA
CTAATGGTTTTGGCATTACCACAACGAGTTCCAGAGGAAA
TGTAGTTTCTCAACAATGCAGTTGGTATCGTCTTTGTCAC
TGAAGCGGCGGGTTGATGCGCGAGTGTGTTTGTGCTGCAG
TACATAGAGCCTCGCTGAGCCCGTGATCTACTTGAAGTAG
AGCTCACGTTTTTTTTAGTCTAGGGGGAGGATTTTAACAC
ACACACACACACTCAGAGCCTGTGACCGTTAAACCAGTTT
ACCTACAGAAAAATGTGTCTCAAAGGACAAGGCTTGCGTT
TGTCATGCTCGATGTATGTAAACGTCTCCAATTGTTTTCC
TTTTTTTTTTTTTCCCCTTGCGTCCCGTTTAGTGCTATAG
GATGACATTTCAGTGGTATCCATTTCCTGTGCTCTTCAGT
TCTCATTGTAGAAATTTTAACTCGATTGCTTGAAATGTAT
TGTTGAAATGATTATTACTATTATTTTTGTGTCTAAGATC
AAGAACATGCTTGACGGCGAGTCTTAGTCCTGTTGTGGGA
ACTGAATGTACCAGCGCCCATGTGTTCATGTTGAAGCACA
ACCATCGTGTGCGGTCGAAACACCAAATGTTCTCACGGAG
TTACAGTATTTTTGTCGCAGAACTTCTTTTAACCCTTTTT
TTTTTTTATCCAATGTAAGCAAAACATTTGAATTTGAAGC
ATGTCACCTTCTCCAATGGCGTTCGGCTTCTTAAACCGAA
CTCGTAAGAAGATCAGATGCTTTAAAGAAGCTCTTCTTGT
CCTTAATTTTGATGGACCCCGTTAATCTTTTCCAAATGAT
TATTATATGGTAAGCATTAACCGTTTTAACCTACCGTAAA
CTTGACTGTTATTTGCTTGTTTCGTTGATCAAAACCACTG
CTTCGTGGAACATTCGGCACTTCCGCTGGCACATGTACGA
TCGGAGTGGACGAATGCTTCGCTCCTAGACTCTGACGGAG
AGGCTTTTCTGGTTTTGGTGTGCTGAAAGAGCAGGGAAGT
GTTCAAGATTTCATTATGTAGTGCTTGACGTGCATGGCAC
CAGATTATTCTTTGTAAATGTAAAGGATGAGCCAACCTCA
TGGTGTTTCTTCAACCACTTTTGTCCTTTTTCTTTTCCTC
CTAATTTTTTTTAACCAATTATTTATTACCATGTAATGTC
TTTTTAAGTATTGCTGCTATTACCATTATTCCATAGTTTT
CAGAGAAAGCTGAGTTCTTGTGAAAGCTGTACACTAATCT
CTTTTATTTTATGTATGAATCAAAGTATTTAAACCTGCTG
CTGATTCTTCAGGAGGTTAAGAGGATCGGTTCGCCTGATC
TTTTGACCTGGATGGAGTTGGCGAGTGATGTAGGCCAGGC
CCCGGTGGTCATGTTCATATTTGTGATATATGCAATAAAA
TCCATCACCTTTTTATTCTTGGTTCTGTCTTACAATGTCT
TCTTCCTCACTTCAGATCGGTTGGGATGTGTCTTTGACGA
GTGTGCAAAAATGAAGTTTTCCAATTTTCCAAAAGACCGT
GAATGCCTACAGTGGTGAACCGTTTTTAAAACTTGCATAC
AACACAAGAGAGGTGATGTTTAATGTTGTGTAATTGTGGG
AATGGCTAGTGAGCTTGAAGATGAGTCTGGACTTTGCCTG
AAGTTACAGTTGTTTTCATTTTTCTCTAAGAAAAAACTTT
TTTTTTTTTTTTTTGGAGTAATGTGACCAGTATCATCACA
TTGTACAATTATTAGGTCCTGAGTGTCATTGTTTATTCGA
TGCAAGAGTAATGTAACTTACTATGTACTAAACATTTCTG
AAACAAATTCAGTGTAAATAAGATTATATTAAAGAAACTA
AATTGCAAA

Segment Relationships
Protein Products
No data available
Supporting Sequences
Citations