Transcript

si:ch1073-291l11.2-005

ID

ZDB-TSCRIPT-131113-4530

Name

si:ch1073-291l11.2-005 Nomenclature History

Previous Names

ch1073-291l11.2-005

Transcript Type

ncRNA

Annotation Status

retained intron

Annotation Method

Ensembl

Associated With Genes

si:ch1073-291l11.2 (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000154571 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|ENSDART00000154571.2|gene_biotype:processed_transcript|ENSDARG00000095477.4 transcript_biotype:retained_intron  ncrna chromosome:GRCz11:2:13784509:13785483:-1
GCCATCGTACATGCTCTGGGTGTCTTGAGGAGCTTGTCTT
TGGATGATGCTGAGCAGGTCTTTCTTTCTGGTAAAGATTA
TCATTACAGTGAAGTAAAAGAATTTAACAGACAAACAACT
GACGAAAGAAGAGAGACCATTCAATAGGTGGGTATTGCTC
TTATATACTTAAAAATATGAAGTTGGGAGTAGGTGTCCTG
TTTGGTTCTCCCAACAGTGCATAAGCTTAAGCCAGAAATT
ATATATATACTGTATATAACACTGTAAAGCAAATGTTTGT
TATTTTACCTCTTATATTAAATATTGCATAACAATTGGTT
AACCTTTGAGTTCATATACATGATTTTACATATTCAAGAA
TATATATATATTCATTCATTTTCTTTTCGGCTTAGTCCCT
TTATTTATCAGGGGTTGCCACAGCAGAATGAACCGCCAAC
TTATCCAGCATATGTTTTACACAGTGGATGCCCTTCCAGC
CGCAACCCAGTACTGGGAAACACCCATTTACACTCATAGT
GTACACTTGAACACGGGGAGAACATGCAAATTCTACACAG
AAAGGACCACTGGCCCAGCCGGGGCTTGAACCAGCAACCT
TCTTGCTGTGAGGCGACGGTGCTAACCACTGTGCTGCCCT
ATGTGCTCTATGCGGGTGAGTGGGATTGACAAACCACCTG
GAGGACACACTCTTGCTGTCTTAATGCACCAGACATTTTG
TTATAAATAATCATGTGCGTTTCATGTTTATTCATATAAC
TACTATTTTATGTCATAGCACTTCATTTTTGTCTTGATAT
TTAATATGTCTTGTTTAAATACACTATGAACAGCAGCTGC
GCTAATTAATTTCCTTGTTCCCTATTTCCACCTGGGGATA
TTC

OTTDART00000059065 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000059065|OTTDARG00000040946|ZDB-GENE-131120-77 si:ch1073-291l11.2|no_translation CH1073-291L11.2-005 LG_ CU657977.13 Danio rerio processed_transcript NOVEL, 883 bp
GCCATCGTACATGCTCTGGGTGTCTTGAGGAGCTTGTCTT
TGGATGATGCTGAGCAGGTCTTTCTTTCTGGTAAAGATTA
TCATTACAGTGAAGTAAAAGAATTTAACAGACAAACAACT
GACGAAAGAAGAGAGACCATTCAATAGGTGGGTATTGCTC
TTATATACTTAAAAATATGAAGTTGGGAGTAGGTGTCCTG
TTTGGTTCTCCCAACAGTGCATAAGCTTAAGCCAGAAATT
ATATATATACTGTATATAACACTGTAAAGCAAATGTTTGT
TATTTTACCTCTTATATTAAATATTGCATAACAATTGGTT
AACCTTTGAGTTCATATACATGATTTTACATATTCAAGAA
TATATATATATTCATTCATTTTCTTTTCGGCTTAGTCCCT
TTATTTATCAGGGGTTGCCACAGCAGAATGAACCGCCAAC
TTATCCAGCATATGTTTTACACAGTGGATGCCCTTCCAGC
CGCAACCCAGTACTGGGAAACACCCATTTACACTCATAGT
GTACACTTGAACACGGGGAGAACATGCAAATTCTACACAG
AAAGGACCACTGGCCCAGCCGGGGCTTGAACCAGCAACCT
TCTTGCTGTGAGGCGACGGTGCTAACCACTGTGCTGCCCT
ATGTGCTCTATGCGGGTGAGTGGGATTGACAAACCACCTG
GAGGACACACTCTTGCTGTCTTAATGCACCAGACATTTTG
TTATAAATAATCATGTGCGTTTCATGTTTATTCATATAAC
TACTATTTTATGTCATAGCACTTCATTTTTGTCTTGATAT
TTAATATGTCTTGTTTAAATACACTATGAACAGCAGCTGC
GCTAATTAATTTCCTTGTTCCCTATTTCCACCTGGGGATA
TTC

Related Transcripts

Transcripts related to si:ch1073-291l11.2

Type	Name	Annotation Method	Length (nt)	Analysis
lincRNA	si:ch1073-291l11.2-001 (1) Ensembl	Ensembl	288 nt	Select Tool ZFIN BLAST
lincRNA	si:ch1073-291l11.2-002 (1) Ensembl	Ensembl	779 nt	Select Tool ZFIN BLAST
lincRNA	si:ch1073-291l11.2-003 (1) Ensembl	Ensembl	748 nt	Select Tool ZFIN BLAST
lincRNA	si:ch1073-291l11.2-004 (1) Ensembl	Ensembl	246 nt	Select Tool ZFIN BLAST
lincRNA	si:ch1073-291l11.2-006 (1) Ensembl	Ensembl	452 nt	Select Tool ZFIN BLAST
lincRNA	si:ch1073-291l11.2-007 (1) Ensembl	Ensembl	490 nt	Select Tool ZFIN BLAST
ncRNA	si:ch1073-291l11.2-005	Ensembl	883 nt

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations