Transcript

lin37-203

ID

ZDB-TSCRIPT-131113-4456

Name

lin37-203 Nomenclature History

Previous Names

lin37-002

Transcript Type

aberrant processed transcript

Annotation Status

nonsense mediated decay

Annotation Method

Ensembl

Associated With Genes

lin37 (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000156154 (1) [ Show ] (double-click sequence to select)

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>tpe|ENSDART00000156154.2|gene_biotype:protein_coding|ENSDARG00000053950.7 transcript_biotype:nonsense_mediated_decay gene_symbol:lin37 cdna chromosome:GRCz11:15:37589787:37597073:1
AAAGCGGTTCGTCGTCAGTCTCTCAGCTAAGGATTGTAAG
GTAAAGAATACTGGTTGTGTGAGGATCACGTCGGAGGCAC
GATGTTACACTGTAAAATCAAGACTGAAAAAACAGATGCT
GGGGCTCGAAACCGGCTTGATGCGGTGTTACAAGGTCTGG
TTGAGAGAAGTGACAGTGAGAGAGAGCAGAATGAAGAGGA
TTCTGGGAAAATGGTGGCAGATTCTTTGGCCAAAGATTTG
TCACCTTCTTCTGCAGGCAAAAGGCAAGCAAAATCTTTCC
TGACATTTATTTTGCAGAATACATTAAATAAAACAGCCTC
AGCAGCTTCTTCTAACATAATTTGTTATTGTATTGGCAGC
AAAATCATGGCTGATATATCTTAAGTATGAGTATGTCGCA
TACCCTAACTACTCTGCTGTTTGACCCTCTTAAAGCTCTT
CAGCATTTAAATGTGTGCTTTATAAATATTTACAATAGCG
ATACAAACAGAGCATCAAATATTATTTCCTAATGGATTGG
TTGATTTTGCTTCAAGAGCCTCTTTATGCTTCTCACAGAC
CATCCTCACGATTCCCACAACACAGAAGGAAGAAGCGTAA
GGAGATGGACGATAGTCTATCTGAAACTAACCAGCACAAA
CAAAATGCTTATATCATCAAGTTATTTGACCGCAGTGTAG
ACTTGGCTCAGTTTAGCACCACCACGCCACTGTATCCCAT
TTGTCGGGCATGGATGAGAAACAACCCTGCAATGCGAGAG
AGAACG

OTTDART00000057736 (1) [ Show ] (double-click sequence to select)

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>tpe|OTTDART00000057736|OTTDARG00000040221|ZDB-GENE-050417-446 lin37|OTTDARP00000045232 lin37-002 LG_ CT027748.10 Danio rerio protein_coding KNOWN, 766 bp
AAAGCGGTTCGTCGTCAGTCTCTCAGCTAAGGATTGTAAG
GTAAAGAATACTGGTTGTGTGAGGATCACGTCGGAGGCAC
GATGTTACACTGTAAAATCAAGACTGAAAAAACAGATGCT
GGGGCTCGAAACCGGCTTGATGCGGTGTTACAAGGTCTGG
TTGAGAGAAGTGACAGTGAGAGAGAGCAGAATGAAGAGGA
TTCTGGGAAAATGGTGGCAGATTCTTTGGCCAAAGATTTG
TCACCTTCTTCTGCAGGCAAAAGGCAAGCAAAATCTTTCC
TGACATTTATTTTGCAGAATACATTAAATAAAACAGCCTC
AGCAGCTTCTTCTAACATAATTTGTTATTGTATTGGCAGC
AAAATCATGGCTGATATATCTTAAGTATGAGTATGTCGCA
TACCCTAACTACTCTGCTGTTTGACCCTCTTAAAGCTCTT
CAGCATTTAAATGTGTGCTTTATAAATATTTACAATAGCG
ATACAAACAGAGCATCAAATATTATTTCCTAATGGATTGG
TTGATTTTGCTTCAAGAGCCTCTTTATGCTTCTCACAGAC
CATCCTCACGATTCCCACAACACAGAAGGAAGAAGCGTAA
GGAGATGGACGATAGTCTATCTGAAACTAACCAGCACAAA
CAAAATGCTTATATCATCAAGTTATTTGACCGCAGTGTAG
ACTTGGCTCAGTTTAGCACCACCACGCCACTGTATCCCAT
TTGTCGGGCATGGATGAGAAACAACCCTGCAATGCGAGAG
AGAACG

Related Transcripts

Transcripts related to lin37

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	lin37-203	Ensembl	766 nt
mRNA	lin37-201 (1) Ensembl	Ensembl	1,068 nt	Select Tool ZFIN BLAST
mRNA	lin37-202 (1) Ensembl	Ensembl	754 nt	Select Tool ZFIN BLAST
mRNA	lin37-204 (1) Ensembl	Ensembl	610 nt	Select Tool ZFIN BLAST

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations