Transcript

masp1-003

ID

ZDB-TSCRIPT-131113-4450

Name

masp1-003 Nomenclature History

Previous Names

dkeyp-75c7.1-003

Transcript Type

ncRNA

Annotation Status

retained intron

Annotation Method

Ensembl

Associated With Genes

masp1 (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000157105 (1) [ Show ] (double-click sequence to select)

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>tpe|ENSDART00000157105.2|gene_biotype:protein_coding|ENSDARG00000068726.6 transcript_biotype:retained_intron cdna chromosome:GRCz11:15:36216029:36222639:1
AGCAATTCCAGAGTGAACATTGCTTCTGTGTCAATTTTCT
TTGTATTTGTAATCTGTCAAACATCTAAGTTACAACCATA
TTATGTAATATTGTATGAACATTTTAACATTATTGTTATT
ATTCATAAAGTAAAAAGTAATAAAAAAGAAATAAGAGTCA
TACCAAAATATTTTCTAATGAAATCCAAAAACAAGGCTCT
TTAATTCAATTTCTTTCTCATCTTCCCTAGAGGTTGACTG
TGGTCCAGTAGATGAACTTCTGGCTGAGGTTGTTTTTGTG
AACTCTGACAACAGCACTGTGTTTGGATCCCAAATCCAGT
ACAGCTGCAGAGACTCTGCTGTCAACAACACATACACCTG
TAACCAGAGTGGGATATGGCTTAGTGATGATGGGATGCCG
CTGCCCTCCTGTCTGCCAGGAGTTATTGAAGGAAATTTGA
GCAGGCCTGCCGGTCCTGAATCTCCTACGCCACTTGCAAG
CACTCCTCTTGCATGTGGTGAGCAATCCCAGCCCTTCCCT
GCCCATCAGAAGCGAATTGTAGGCGGCAGACCAGCATCTC
CGGGTCTGTTCCCCTGGCAGGTTCTTCTCTCAGTGGAGGA
TGTGTACCGTGTGCCTGTGGTTCGCTGGTTCGGCAGCGGG
GCTCTCCTCTCTCCACTCTGGATCGTCACAGCCGCTCACG
TCCTCA

OTTDART00000057713 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000057713|OTTDARG00000040209|ZDB-GENE-110421-4 masp1|no_translation DKEYP-75C7.1-003 LG_ BX571739.9 Danio rerio protein_coding NOVEL, 686 bp
AGCAATTCCAGAGTGAACATTGCTTCTGTGTCAATTTTCT
TTGTATTTGTAATCTGTCAAACATCTAAGTTACAACCATA
TTATGTAATATTGTATGAACATTTTAACATTATTGTTATT
ATTCATAAAGTAAAAAGTAATAAAAAAGAAATAAGAGTCA
TACCAAAATATTTTCTAATGAAATCCAAAAACAAGGCTCT
TTAATTCAATTTCTTTCTCATCTTCCCTAGAGGTTGACTG
TGGTCCAGTAGATGAACTTCTGGCTGAGGTTGTTTTTGTG
AACTCTGACAACAGCACTGTGTTTGGATCCCAAATCCAGT
ACAGCTGCAGAGACTCTGCTGTCAACAACACATACACCTG
TAACCAGAGTGGGATATGGCTTAGTGATGATGGGATGCCG
CTGCCCTCCTGTCTGCCAGGAGTTATTGAAGGAAATTTGA
GCAGGCCTGCCGGTCCTGAATCTCCTACGCCACTTGCAAG
CACTCCTCTTGCATGTGGTGAGCAATCCCAGCCCTTCCCT
GCCCATCAGAAGCGAATTGTAGGCGGCAGACCAGCATCTC
CGGGTCTGTTCCCCTGGCAGGTTCTTCTCTCAGTGGAGGA
TGTGTACCGTGTGCCTGTGGTTCGCTGGTTCGGCAGCGGG
GCTCTCCTCTCTCCACTCTGGATCGTCACAGCCGCTCACG
TCCTCA

Related Transcripts

Transcripts related to masp1

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	masp1-201 (1) Ensembl	Ensembl	2,451 nt	Select Tool ZFIN BLAST
mRNA	masp1-202 (1) Ensembl	Ensembl	2,468 nt	Select Tool ZFIN BLAST
mRNA	masp1-204 (1) Ensembl	Ensembl	1,415 nt	Select Tool ZFIN BLAST
mRNA	masp1-206 (1) Ensembl	Ensembl	3,086 nt	Select Tool ZFIN BLAST
ncRNA	masp1-002 (1) Ensembl	Ensembl	692 nt	Select Tool ZFIN BLAST
ncRNA	masp1-003	Ensembl	686 nt

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations