Transcript

ctsl.1-202

ID

ZDB-TSCRIPT-131113-3934

Name

ctsl.1-202 Nomenclature History

Previous Names

ctsl.1-003

Transcript Type

aberrant processed transcript

Annotation Status

nonsense mediated decay

Annotation Method

Ensembl

Associated With Genes

ctsl.1 (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000155591 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|ENSDART00000155591.2|gene_biotype:protein_coding|ENSDARG00000003902.9 transcript_biotype:nonsense_mediated_decay gene_symbol:ctsl.1 cdna chromosome:GRCz11:17:27456956:27460783:1
GACACACAGGTGACAAGGAAATCTATAGATCTTGCACCAC
AACAAGATGAGGGTTCTGGTCGTTGCTGCTGCTTTTCTGG
CTGTTGCCAGTGCTGCCAGTCTTTCTCTGGAGGACATGGA
GTTTCACGCCTGGAAACTGAAGTTTGGAAAGAGCTACAGA
TCTGCAGAGGAAGAGTCACACCGTCAGCTGACCTGGCTGA
CCAATCGCAAACTGGTTTTGGTCCACAACATGATGGCAGA
TCAGGGTTTGAAATCCTACCGACTTGGCATGACATACTTT
GCTGACATGAGTAATGAGGAATACAGACAACTGGTGTTTC
GTGGATGTCTGGGCTCCATGAATAACACTAAGGCCCGTGG
TGGATCTACATTCTTCAGCTCTATTCATCAGGTGTCTATA
ATGAGCCTGACTGCAGCAGCTCTGAATTAGATCACGGTGT
TCTGGCTGTTGGTTATGGAAGTAGCAATGGTGATGACTAT
TGGATTGTCAAGAACAGCTGGGGCCTGGATTGGGGTGTTC
AGGGCTATATCTTGATGTCGAGA

OTTDART00000055550 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000055550|OTTDARG00000038746|ZDB-GENE-040718-61 ctsl.1|OTTDARP00000043567 ctsl.1-003 LG_ FP015965.8 Danio rerio protein_coding KNOWN, 543 bp
GACACACAGGTGACAAGGAAATCTATAGATCTTGCACCAC
AACAAGATGAGGGTTCTGGTCGTTGCTGCTGCTTTTCTGG
CTGTTGCCAGTGCTGCCAGTCTTTCTCTGGAGGACATGGA
GTTTCACGCCTGGAAACTGAAGTTTGGAAAGAGCTACAGA
TCTGCAGAGGAAGAGTCACACCGTCAGCTGACCTGGCTGA
CCAATCGCAAACTGGTTTTGGTCCACAACATGATGGCAGA
TCAGGGTTTGAAATCCTACCGACTTGGCATGACATACTTT
GCTGACATGAGTAATGAGGAATACAGACAACTGGTGTTTC
GTGGATGTCTGGGCTCCATGAATAACACTAAGGCCCGTGG
TGGATCTACATTCTTCAGCTCTATTCATCAGGTGTCTATA
ATGAGCCTGACTGCAGCAGCTCTGAATTAGATCACGGTGT
TCTGGCTGTTGGTTATGGAAGTAGCAATGGTGATGACTAT
TGGATTGTCAAGAACAGCTGGGGCCTGGATTGGGGTGTTC
AGGGCTATATCTTGATGTCGAGA

Related Transcripts

Transcripts related to ctsl.1

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	ctsl.1-202	Ensembl	543 nt
mRNA	ctsl.1-201 (1) Ensembl	Ensembl	1,434 nt	Select Tool ZFIN BLAST
mRNA	ctsl.1-204 (1) Ensembl	Ensembl	1,655 nt	Select Tool ZFIN BLAST
mRNA	ctsl.1-205 (1) Ensembl	Ensembl	1,817 nt	Select Tool ZFIN BLAST
ncRNA	ctsl.1-002 (1) Ensembl	Ensembl	642 nt	Select Tool ZFIN BLAST

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations