Transcript

rtfdc1-004

ID

ZDB-TSCRIPT-131113-3750

Name

rtfdc1-004 Nomenclature History

Previous Names

ch73-109i3.1-004

Transcript Type

ncRNA

Annotation Status

retained intron

Annotation Method

Ensembl

Associated With Genes

rtf2 (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000154406 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|ENSDART00000154406.2|gene_biotype:protein_coding|ENSDARG00000040607.9 transcript_biotype:retained_intron gene_symbol:rtf2 cdna chromosome:GRCz11:6:56131760:56138503:1
TTTTCAACAGCGTCATAATGTTAGATTACTGTTCACATAA
ACTCATTTATAGGTGTTTTATGCATTTAAACATGTAATAT
GTGCTGCAGATAAATAGATTAACAAATTGCTGTGTTGAAT
AGTTTTAGATTAATTTACGCTACATCATTTTCCAGTAATG
ATGAAGCTACTTGTTAATTTAATGCACTGGTCACACTTTA
CAATAAGGTTCATTAGTTAATGTTAATTAATGCATTTACT
AACATGAACAAACAATGAACAATACATTTACTACTGTATT
TGTTCATGTCAGTTAACGTTAGTTAATGAAAATACAGTAG
TTCATTCATTGTTAGTTCATGTTAACTCATGGTGCATTAA
CTAATGTTAACAAGCATGGACTTGGATGTTAATAATGCAT
TAATAAATGTTCAATTATGATTAATAAATGCTGTACATGT
GTTGTTCATGATTAGCTCATGTTAGTAAACGCATTAACTA
ATGAACCTTATTGTAAAGAGTTACCAATGCACTGTAAAAC
TAATGCTTTTCTTTTACTCTTTTAATAGCAGAAAGCTGTA
AATTACCGCAAAACCCCTCAGAATCGAAATCCGCATCAGA
AAATGGAGAGGGCAGCAGTGGAAGCAGCAGTGATTCAGCT
CCAGGACCATCCACCTCCGGAGAGAGCCTGAAGACGCTTA
AGGCCACCGCAGGTCCCTTTACTGGCAGCAAAAGATCAAT
CCAAGACATGAAGGATAAATCCGAGGCCTTCAAGTCTCTC
TTCACCTCTCACAGCTCCGCCAAACGCACCAAAGACCAGA
C

OTTDART00000054886 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000054886|OTTDARG00000038302|ZDB-GENE-030131-4825 rtfdc1|no_translation CH73-109I3.1-004 LG_ CU469361.12 Danio rerio protein_coding KNOWN, 801 bp
TTTTCAACAGCGTCATAATGTTAGATTACTGTTCACATAA
ACTCATTTATAGGTGTTTTATGCATTTAAACATGTAATAT
GTGCTGCAGATAAATAGATTAACAAATTGCTGTGTTGAAT
AGTTTTAGATTAATTTACGCTACATCATTTTCCAGTAATG
ATGAAGCTACTTGTTAATTTAATGCACTGGTCACACTTTA
CAATAAGGTTCATTAGTTAATGTTAATTAATGCATTTACT
AACATGAACAAACAATGAACAATACATTTACTACTGTATT
TGTTCATGTCAGTTAACGTTAGTTAATGAAAATACAGTAG
TTCATTCATTGTTAGTTCATGTTAACTCATGGTGCATTAA
CTAATGTTAACAAGCATGGACTTGGATGTTAATAATGCAT
TAATAAATGTTCAATTATGATTAATAAATGCTGTACATGT
GTTGTTCATGATTAGCTCATGTTAGTAAACGCATTAACTA
ATGAACCTTATTGTAAAGAGTTACCAATGCACTGTAAAAC
TAATGCTTTTCTTTTACTCTTTTAATAGCAGAAAGCTGTA
AATTACCGCAAAACCCCTCAGAATCGAAATCCGCATCAGA
AAATGGAGAGGGCAGCAGTGGAAGCAGCAGTGATTCAGCT
CCAGGACCATCCACCTCCGGAGAGAGCCTGAAGACGCTTA
AGGCCACCGCAGGTCCCTTTACTGGCAGCAAAAGATCAAT
CCAAGACATGAAGGATAAATCCGAGGCCTTCAAGTCTCTC
TTCACCTCTCACAGCTCCGCCAAACGCACCAAAGACCAGA
C

Related Transcripts

Transcripts related to rtf2

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	rtf2-201 (1) Ensembl	Ensembl	1,785 nt	Select Tool
mRNA	rtf2-204 (1) Ensembl	Ensembl	771 nt	Select Tool
mRNA	rtf2-205 (1) Ensembl	Ensembl	3,704 nt	Select Tool ZFIN BLAST
ncRNA	rtfdc1-003 (1) Ensembl	Ensembl	743 nt	Select Tool
ncRNA	rtfdc1-004	Ensembl	801 nt

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations