Transcript

si:ch211-287n14.3-209

ID

ZDB-TSCRIPT-131113-3253

Name

si:ch211-287n14.3-209 Nomenclature History

Previous Names

ch211-287n14.3-005
si:ch211-287n14.3-005

Transcript Type

aberrant processed transcript

Annotation Status

nonsense mediated decay

Annotation Method

Ensembl

Associated With Genes

si:ch211-287n14.3 (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000157282 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|ENSDART00000157282.3|gene_biotype:protein_coding|ENSDARG00000093650.5 transcript_biotype:nonsense_mediated_decay cdna chromosome:GRCz11:24:29028402:29029657:-1
CATCGTACATCCTCTGTGTGTCTTGAGGAGCTGGTCTTTG
GATAATGCTGAGCAGGTCTTTCTTTCTGGTAAAGATTATT
ATTACAGTGAAGTAAAAGAATTTAACAGACAGATTTACAA
ACAACTGACGAAAGAAGGGAGACCATTCAATAGCGGATGC
CCTTCCAGCTGCAACCCAGTACTGGGAAACACCCATTTAC
ACTCATACACTTGAACATGGGGAGAACATGCAAACTCCAC
ACAGAAATGACCACTGGCCCAGCCGGGGCTTGAACCAGCA
ACCTTCTTGCTGTGAAGCGACGGTGCTAACCACTGTGCTG
CCCTATGTGCTCTATGCGGAGGCCTCTAGAGATCGTAACC
TGTGAAGAGATGATGCCACCATAGAGGACTTCTAAATGTA
TCCATAATCCTGAAACAGACCGTATCATGAGCAGATGCTG
TGGTGGTCATGGAGAAGTGGAGAGCATGAGACTGATTAAT
GAAAGACCCCAGTGACAGATGAGTGCCCACATTGACCCTG
TGGTCCAGCCTGAAAACC

OTTDART00000044702 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000044702|OTTDARG00000032045|ZDB-GENE-131120-146 si:ch211-287n14.3|OTTDARP00000035371 CH211-287N14.3-005 LG_ CR388050.17 Danio rerio protein_coding NOVEL, 538 bp
CATCGTACATCCTCTGTGTGTCTTGAGGAGCTGGTCTTTG
GATAATGCTGAGCAGGTCTTTCTTTCTGGTAAAGATTATT
ATTACAGTGAAGTAAAAGAATTTAACAGACAGATTTACAA
ACAACTGACGAAAGAAGGGAGACCATTCAATAGCGGATGC
CCTTCCAGCTGCAACCCAGTACTGGGAAACACCCATTTAC
ACTCATACACTTGAACATGGGGAGAACATGCAAACTCCAC
ACAGAAATGACCACTGGCCCAGCCGGGGCTTGAACCAGCA
ACCTTCTTGCTGTGAAGCGACGGTGCTAACCACTGTGCTG
CCCTATGTGCTCTATGCGGAGGCCTCTAGAGATCGTAACC
TGTGAAGAGATGATGCCACCATAGAGGACTTCTAAATGTA
TCCATAATCCTGAAACAGACCGTATCATGAGCAGATGCTG
TGGTGGTCATGGAGAAGTGGAGAGCATGAGACTGATTAAT
GAAAGACCCCAGTGACAGATGAGTGCCCACATTGACCCTG
TGGTCCAGCCTGAAAACC

Related Transcripts

Transcripts related to si:ch211-287n14.3

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	si:ch211-287n14.3-202 (1) Ensembl	Ensembl	627 nt	Select Tool ZFIN BLAST
aberrant processed transcript	si:ch211-287n14.3-205 (1) Ensembl	Ensembl	585 nt	Select Tool ZFIN BLAST
aberrant processed transcript	si:ch211-287n14.3-206 (1) Ensembl	Ensembl	433 nt	Select Tool ZFIN BLAST
aberrant processed transcript	si:ch211-287n14.3-209	Ensembl	538 nt
mRNA	si:ch211-287n14.3-201 (1) Ensembl	Ensembl	295 nt	Select Tool ZFIN BLAST
mRNA	si:ch211-287n14.3-203 (1) Ensembl	Ensembl	582 nt	Select Tool ZFIN BLAST
mRNA	si:ch211-287n14.3-204 (1) Ensembl	Ensembl	390 nt	Select Tool ZFIN BLAST
mRNA	si:ch211-287n14.3-208 (1) Ensembl	Ensembl	778 nt	Select Tool ZFIN BLAST
ncRNA	si:ch211-287n14.3-008 (1) Ensembl	Ensembl	325 nt	Select Tool ZFIN BLAST

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations