Transcript

efcab6-001

ID
ZDB-TSCRIPT-131113-2580
Name
efcab6-001 Nomenclature History
Previous Names
  • ch211-68a17.9-001
Transcript Type
pseudogenic transcript
Annotation Status
Annotation Method
Ensembl
Associated With Genes
Strain
TU
Non Reference Strain
Genome Resources
RNA Central
None
Note
None
Sequence
ENSDART00000019765 (1) [ Show ] (double-click sequence to select) [Download]
>tpe|ENSDART00000019765.9|gene_biotype:unprocessed_pseudogene|ENSDARG00000020735.9 transcript_biotype:unprocessed_pseudogene gene_symbol:efcab6 cdna chromosome:GRCz11:25:18978648:19008227:-1
CAGGAGCGTCCTCGACTGTCTACAGAAGAGTTGTGGTCAA
GTTTTCCTCTTTAGTTTCAAGTGTTTATGTGATTATTTTA
CACAGAAATGCGGCCGAGGTCCGCTGTGGAGAGCTGGGTG
TCAGCTTCAGCACAGATGCCTCAAATCTCAAGTAATTTAG
ATTTGAGGCCTATGACACAAGGACTCACCATCATCCCCAG
AGCCAAGAGTGCATCTCGGTTGTCCTCAGGAGACTTTTCC
AGAAGGAACACTCTCAAATCTGACTCCGCCTCCTCTGTAC
AGTCAGTGGCGGATGAGAATCTTTCTTTAGTGGACATTGA
GAATCTACTGCTGGAAAAAGTCAAGGACAGAAAAGATGAC
TTGAAGGCTGCTTTTGAAGCTTTTGACCAGGAAGGCAACA
AAACCGTCACCAAAGGAGAGTTCAGACGCGTCATTGAAGG
GTTTCTTGTTCCACTTACTCAGTCTCAGTTTGAGAGTTTG
TTGGCTCAGCTTGAATTAAAAGAAAATGGAACAGTTTCCT
ACATGGAGTTTCTCAGAAGGCACTGCAAGGTTTCATCCAC
AGTGGGCAGGATTCCGAGCAAGAGTGGAAGATACAGAAAC
TTGTCACTTGGAGAACTACAGTGTCGACTAAGAGATAAGA
TGAGAGGCCATTTGAAAAACATCACCAGGGCTTTTCGGCT
GTTTGACTACAACAACGATGGGCAGATACAGCAACATGAG
CTTCGCAAAATATTGGAAGGATACTGCTTTCCCATGAGCC
AGCTGGAATTCCACAGACTGTGGTCACATTACAGCATGAA
TAATGCTGATACAATATCCTACAAGGTGTTTCTTGAGAAG
CTTGGTGTTGACTGTGAAAACTATCGAAAAATCCCACCAG
ATTCAGTACAACTTGCACTGAATTGGGATGCTGTCAGTCG
CAGTACCACAAGACCTAAAAGTAAGACAAGCTTAAGGAGG
TTTTCAGGCAAATCCAGAGACAACTTGGATGACATCCAAA
TTAGGTTTTTGAGCAAGATGAAGAAGGACCATAGCCTTGT
TGAAAAAGCTCTGCAAGCGTTTGACATTTCAGACAGTGGG
TTTGTTTCTCTTGAGGATCTCAGATCTATTCTCAGCAATT
TCCTCTTCGCCATGGATGATACTATCTTTAGGGAACTGTT
GAAAAGATTTGGGGTTAGCAATACAGAACCTGTCAAATGG
AAAATATTTCTTGGATTGTTTAAAGATGACATAACTGTTC
AGAAAGATTCTGTTCCAGCAACTGCAGACACATGCAGTAT
TGATGCGATTTTGTCCAAACTACGGCAACATGTACTGAAT
CAGCCTCTTTTGGACCTTGATAAAAGCGCTACAGGATTTA
TCAGTAGAAATGAATTATTCAGTGCTCTGGAAAATATGAA
TCTCACCGATGAGCAGTTCACAGTTCTTGCTGATTTCTTG
GATGTGGATCATACAGATGCCATAAATTGCCAACAGTTCC
TTGACTTACTGCATCTCCAAAATCCAGTCGTGCAGACTCC
AAAACTTAATGAAAAGGCTCAAGCAAGATTAAACACAGCA
ATAACAGCGCAGAATGCAATTGAAAAGATTCTGAAGGAGA
AGATTTCAGAAAACTACGACGTGCTGATGGAATCAATCAC
AAACACAACCCAAAACCAGAATGACACCATTTCTCCAGAG
GACTTTAGGAGATTGATCCAACACGTCCTACCGCTGTCTG
ACCACCACTTCATCAAGCTTTGTGAACCATTTTTTGAAGA
TGGAAATGTAAACTACAAGCTATTTTTGAAGAGTTTCGGT
CCTCCAGAGAAGATTGACAGCACCCTCAGTATGATTGAGA
GGGAAGAAAAGGCACATGAAGCTTCCATACTGGACATAAA
AGCACAAGCAATAAAGGATGTTGTCTTGAGGAAACTCAAA
GACAGGCTTCAGAGGAAAGGGGTGACTCTTCAGGACTATC
TGATGTCCAGCAGAATCACAAAATCTTCCCTTAATCTAAG
AGATGTCTGTAAAATTCTGGACGATTGTGGTGTTTTCCTG
GAGGGACACCAGTTTCAGATGCTTATTGAGTCCCTTGGCT
TTAATTTGGGTCCAGTTTCTGTTGCTGACTTTGTGGACAA
ATACGAAGAAGTGACAATGCCTGAAAAGGATGATAGTCAG
ACCAAAAATGCAAAATTCTCCACTCTTTTGACTGCTGAGG
ACTGTCTAGGTCAACTTAAAAAGAGGATCAAGGAGTATCA
TGGGGATGCTCTGACTGCTTTCTATCTCATGGACAAAAAC
CGAGATGGTTTAGTAAATCGGATTGACTTCAGAGCTCTGT
TTGACAGCCTGATGTTTGTAACTCAAGAAAGGGAGTATCA
GAGATTGCTCGACATGTTGGGTCTTACACCTGGCGCCACA
CTTAACTACACTGAGTTCCACAAAAAAGTCCAGTCTAGCG
ACAAGATGAAATTACATCACCACGATGGCACATTAAAGGA
CGGAATTCTTGACAATGCATGTGATCAAGTTCATGAGTAC
CTAGCAGCCATTGCACACAAACGACCTTCAGAGATCTCAA
AGGTCTTTTGCCACTTGGGTAACGACTGTAAAAGCATCAT
GACCAAAAATGGTCTAAAGCAGCTGCTTTTTAAGTACAGC
ATGCCCATCACACCAAATGAGTTTGAAATACTTTGGAGCA
GATATGATAAGGAGAGCAAGGGCTTTCTCACTCAGAAAGA
GTTTTTAAGTAAGCTCAAAATCACATCAGATGAAGATCAG
GAACGTCAGGAACAGCCCACAGCAACACCTGACCTAGAGA
TTATGCTACAAAACCTGAGGAAGTGGATCGGGATTGACTT
CGAGAGTGTTAGTGGAAGTCTTGTGGTTCTGGATAAAAAC
AAAGATGGACACGTGACTGTGACAGACCTGCTGTCTCTTC
TACACAGACATGGCTTTCAGTTAACAGAAGCACAGTTTGC
ACATCTACTGAGCCTACTTGGCTTTGACAGCGATCTGAAG
CAGCTGCCATACCTTGATTTCCTAAAGCATCTTGTTGGAC
CTCCAGTTTCCAGCTGGTCTGTATTTGACCCTTCTCAAGG
TCTACCTGTGGCCTCTTCAGAGGAAATGAAGGACGGAGAA
GAGCTGAGCCCTGGAAGAGCCATACAGAGAGTCAAAGAGT
TGGTTACTACCTCCTCCGATACTCTCTTCAAAGCCTTCTC
TGCGTTTGATAGGACTGGAGATGGTATGATTCCACAAGCA
GAGTTTCGGCAGGTGCTGGACCATTTCTGTATGCGCCTCT
CTGATGTGCAGTTCAAAAAGTTGTTGTCTGAGCTGAGATT
GAATGAAGGAGAGTAGCTTGGGGTTAATTGGAAAGAATTT
CTCCAAGTCTTTAACCTCCACAACGAAGAGACAGCAGATG
AATGGCTGAAAAAAATCAGTAAGATGCGATTCCCAAATCA
GACCCGACCTTTAGCCATTGGTGACATTTTGAGGCGGGTA
CAGGAGGTTGTGTCGGCCCGCATCTACACTATAACAAAGG
ATATGGTAGACCTCGACTATGCCAATACAAACACAATCTC
CAGATCTGACTTTAAGACCATCTGTGATCGTCACTTCATG
CGGCTTACAGAGGAGCAGTTACAAAACCTGTGGAAACTCC
TACCAGTTAATGACTTTGGAAATCTAGAATATCGGGAATT
CCTGAAGAAGTTCAGTGGAGAACAGAAAGGCCTGGATCAG
GCTAAGTCGTTACCAGGTTCTGCAAGATCTACAGTGGAGA
GACCAGCATCTCTCAGACGTCCCAAAACGGCACCCTGCTC
CTTGAGACACTCAATGTCATCAGTCTCAGAGCATGTTCAG
AGGCCGTCTACAGCGAGCAGAAGGTCTGCACCCCTCCTGA
ACTGTGAGGATGTGGAGATGAAGGTGCGTCCTAAGATCCA
GGATTGTTGGAGACACATCCAGAGGAGATGCAGACATGCA
GATCCTGAGCAGACGGGGGAGATTGATGTGGATGCCTTCC
TAGGGATCCTCCAGGGTCTTCACATTGAGTTGAGTCCATC
AGAGTTTGAGCAGCTTACTGTCAAATTTGACATAAAAAGC
AACGGCCGCGTCTCTTATCCAGACTTCCTGCGGCACTTTG
TGCTCATGTTCAGTCCTGAGGTCAATTCTTCATCCAACAG
ACTTAGATTGCAGCTGCCCACAACACCCATGAGTCCTGGT
CCACTCAGCGCTCAGTGTGTTGAAGCCATGCTGAGGATCT
CCAGGCCTGTCCAGCTCTTCTGGAGGCAGATGAGGCAAAC
GTTCCTCTCCTTTGACAAAGAGCGCACTGGAAAGATCTCG
GTTCAGGATTTCCGAAAGGTTCTGAGACAGTTCAGTGTGA
ATCTGTCAGAGGAAGAATTATTTCATTTCAAATCTTTTTT
CGACAAGAACCTCTCAGGAAGGATTTCATACAATGACTTT
CTGCGCATTTTTCTGAAATGAGTCCAGGTAGTGTTACACT
CATAACACTGCTTTTGTCACAGTTTTGAAAATAAATAGAT
TTTTCTGATCCTTGAATTCTGTTGTGTTTATTTATACAGC
AACACATTGATATTGATTACGATGTTGTTTATAAATAAAC
ATAAATAAAATGTTTAATATTAAATGCTGAAATAAACTAA
ATAAAATTATATATGAAAAACATTTTTTTACCTTTGTTAT
TTTCATAATTATT

OTTDART00000056555 (1) [ Show ] (double-click sequence to select) [Download]
>tpe|OTTDART00000056555|OTTDARG00000039388|ZDB-GENE-070828-2 efcab6|no_translation CH211-68A17.9-001 LG_none CR391963.18,BX897714.6 Danio rerio unprocessed_pseudogene none, 4693 bp
CAGGAGCGTCCTCGACTGTCTACAGAAGAGTTGTGGTCAA
GTTTTCCTCTTTAGTTTCAAGTGTTTATGTGATTATTTTA
CACAGAAATGCGGCCGAGGTCCGCTGTGGAGAGCTGGGTG
TCAGCTTCAGCACAGATGCCTCAAATCTCAAGTAATTTAG
ATTTGAGGCCTATGACACAAGGACTCACCATCATCCCCAG
AGCCAAGAGTGCATCTCGGTTGTCCTCAGGAGACTTTTCC
AGAAGGAACACTCTCAAATCTGACTCCGCCTCCTCTGTAC
AGTCAGTGGCGGATGAGAATCTTTCTTTAGTGGACATTGA
GAATCTACTGCTGGAAAAAGTCAAGGACAGAAAAGATGAC
TTGAAGGCTGCTTTTGAAGCTTTTGACCAGGAAGGCAACA
AAACCGTCACCAAAGGAGAGTTCAGACGCGTCATTGAAGG
GTTTCTTGTTCCACTTACTCAGTCTCAGTTTGAGAGTTTG
TTGGCTCAGCTTGAATTAAAAGAAAATGGAACAGTTTCCT
ACATGGAGTTTCTCAGAAGGCACTGCAAGGTTTCATCCAC
AGTGGGCAGGATTCCGAGCAAGAGTGGAAGATACAGAAAC
TTGTCACTTGGAGAACTACAGTGTCGACTAAGAGATAAGA
TGAGAGGCCATTTGAAAAACATCACCAGGGCTTTTCGGCT
GTTTGACTACAACAACGATGGGCAGATACAGCAACATGAG
CTTCGCAAAATATTGGAAGGATACTGCTTTCCCATGAGCC
AGCTGGAATTCCACAGACTGTGGTCACATTACAGCATGAA
TAATGCTGATACAATATCCTACAAGGTGTTTCTTGAGAAG
CTTGGTGTTGACTGTGAAAACTATCGAAAAATCCCACCAG
ATTCAGTACAACTTGCACTGAATTGGGATGCTGTCAGTCG
CAGTACCACAAGACCTAAAAGTAAGACAAGCTTAAGGAGG
TTTTCAGGCAAATCCAGAGACAACTTGGATGACATCCAAA
TTAGGTTTTTGAGCAAGATGAAGAAGGACCATAGCCTTGT
TGAAAAAGCTCTGCAAGCGTTTGACATTTCAGACAGTGGG
TTTGTTTCTCTTGAGGATCTCAGATCTATTCTCAGCAATT
TCCTCTTCGCCATGGATGATACTATCTTTAGGGAACTGTT
GAAAAGATTTGGGGTTAGCAATACAGAACCTGTCAAATGG
AAAATATTTCTTGGATTGTTTAAAGATGACATAACTGTTC
AGAAAGATTCTGTTCCAGCAACTGCAGACACATGCAGTAT
TGATGCGATTTTGTCCAAACTACGGCAACATGTACTGAAT
CAGCCTCTTTTGGACCTTGATAAAAGCGCTACAGGATTTA
TCAGTAGAAATGAATTATTCAGTGCTCTGGAAAATATGAA
TCTCACCGATGAGCAGTTCACAGTTCTTGCTGATTTCTTG
GATGTGGATCATACAGATGCCATAAATTGCCAACAGTTCC
TTGACTTACTGCATCTCCAAAATCCAGTCGTGCAGACTCC
AAAACTTAATGAAAAGGCTCAAGCAAGATTAAACACAGCA
ATAACAGCGCAGAATGCAATTGAAAAGATTCTGAAGGAGA
AGATTTCAGAAAACTACGACGTGCTGATGGAATCAATCAC
AAACACAACCCAAAACCAGAATGACACCATTTCTCCAGAG
GACTTTAGGAGATTGATCCAACACGTCCTACCGCTGTCTG
ACCACCACTTCATCAAGCTTTGTGAACCATTTTTTGAAGA
TGGAAATGTAAACTACAAGCTATTTTTGAAGAGTTTCGGT
CCTCCAGAGAAGATTGACAGCACCCTCAGTATGATTGAGA
GGGAAGAAAAGGCACATGAAGCTTCCATACTGGACATAAA
AGCACAAGCAATAAAGGATGTTGTCTTGAGGAAACTCAAA
GACAGGCTTCAGAGGAAAGGGGTGACTCTTCAGGACTATC
TGATGTCCAGCAGAATCACAAAATCTTCCCTTAATCTAAG
AGATGTCTGTAAAATTCTGGACGATTGTGGTGTTTTCCTG
GAGGGACACCAGTTTCAGATGCTTATTGAGTCCCTTGGCT
TTAATTTGGGTCCAGTTTCTGTTGCTGACTTTGTGGACAA
ATACGAAGAAGTGACAATGCCTGAAAAGGATGATAGTCAG
ACCAAAAATGCAAAATTCTCCACTCTTTTGACTGCTGAGG
ACTGTCTAGGTCAACTTAAAAAGAGGATCAAGGAGTATCA
TGGGGATGCTCTGACTGCTTTCTATCTCATGGACAAAAAC
CGAGATGGTTTAGTAAATCGGATTGACTTCAGAGCTCTGT
TTGACAGCCTGATGTTTGTAACTCAAGAAAGGGAGTATCA
GAGATTGCTCGACATGTTGGGTCTTACACCTGGCGCCACA
CTTAACTACACTGAGTTCCACAAAAAAGTCCAGTCTAGCG
ACAAGATGAAATTACATCACCACGATGGCACATTAAAGGA
CGGAATTCTTGACAATGCATGTGATCAAGTTCATGAGTAC
CTAGCAGCCATTGCACACAAACGACCTTCAGAGATCTCAA
AGGTCTTTTGCCACTTGGGTAACGACTGTAAAAGCATCAT
GACCAAAAATGGTCTAAAGCAGCTGCTTTTTAAGTACAGC
ATGCCCATCACACCAAATGAGTTTGAAATACTTTGGAGCA
GATATGATAAGGAGAGCAAGGGCTTTCTCACTCAGAAAGA
GTTTTTAAGTAAGCTCAAAATCACATCAGATGAAGATCAG
GAACGTCAGGAACAGCCCACAGCAACACCTGACCTAGAGA
TTATGCTACAAAACCTGAGGAAGTGGATCGGGATTGACTT
CGAGAGTGTTAGTGGAAGTCTTGTGGTTCTGGATAAAAAC
AAAGATGGACACGTGACTGTGACAGACCTGCTGTCTCTTC
TACACAGACATGGCTTTCAGTTAACAGAAGCACAGTTTGC
ACATCTACTGAGCCTACTTGGCTTTGACAGCGATCTGAAG
CAGCTGCCATACCTTGATTTCCTAAAGCATCTTGTTGGAC
CTCCAGTTTCCAGCTGGTCTGTATTTGACCCTTCTCAAGG
TCTACCTGTGGCCTCTTCAGAGGAAATGAAGGACGGAGAA
GAGCTGAGCCCTGGAAGAGCCATACAGAGAGTCAAAGAGT
TGGTTACTACCTCCTCCGATACTCTCTTCAAAGCCTTCTC
TGCGTTTGATAGGACTGGAGATGGTATGATTCCACAAGCA
GAGTTTCGGCAGGTGCTGGACCATTTCTGTATGCGCCTCT
CTGATGTGCAGTTCAAAAAGTTGTTGTCTGAGCTGAGATT
GAATGAAGGAGAGTAGCTTGGGGTTAATTGGAAAGAATTT
CTCCAAGTCTTTAACCTCCACAACGAAGAGACAGCAGATG
AATGGCTGAAAAAAATCAGTAAGATGCGATTCCCAAATCA
GACCCGACCTTTAGCCATTGGTGACATTTTGAGGCGGGTA
CAGGAGGTTGTGTCGGCCCGCATCTACACTATAACAAAGG
ATATGGTAGACCTCGACTATGCCAATACAAACACAATCTC
CAGATCTGACTTTAAGACCATCTGTGATCGTCACTTCATG
CGGCTTACAGAGGAGCAGTTACAAAACCTGTGGAAACTCC
TACCAGTTAATGACTTTGGAAATCTAGAATATCGGGAATT
CCTGAAGAAGTTCAGTGGAGAACAGAAAGGCCTGGATCAG
GCTAAGTCGTTACCAGGTTCTGCAAGATCTACAGTGGAGA
GACCAGCATCTCTCAGACGTCCCAAAACGGCACCCTGCTC
CTTGAGACACTCAATGTCATCAGTCTCAGAGCATGTTCAG
AGGCCGTCTACAGCGAGCAGAAGGTCTGCACCCCTCCTGA
ACTGTGAGGATGTGGAGATGAAGGTGCGTCCTAAGATCCA
GGATTGTTGGAGACACATCCAGAGGAGATGCAGACATGCA
GATCCTGAGCAGACGGGGGAGATTGATGTGGATGCCTTCC
TAGGGATCCTCCAGGGTCTTCACATTGAGTTGAGTCCATC
AGAGTTTGAGCAGCTTACTGTCAAATTTGACATAAAAAGC
AACGGCCGCGTCTCTTATCCAGACTTCCTGCGGCACTTTG
TGCTCATGTTCAGTCCTGAGGTCAATTCTTCATCCAACAG
ACTTAGATTGCAGCTGCCCACAACACCCATGAGTCCTGGT
CCACTCAGCGCTCAGTGTGTTGAAGCCATGCTGAGGATCT
CCAGGCCTGTCCAGCTCTTCTGGAGGCAGATGAGGCAAAC
GTTCCTCTCCTTTGACAAAGAGCGCACTGGAAAGATCTCG
GTTCAGGATTTCCGAAAGGTTCTGAGACAGTTCAGTGTGA
ATCTGTCAGAGGAAGAATTATTTCATTTCAAATCTTTTTT
CGACAAGAACCTCTCAGGAAGGATTTCATACAATGACTTT
CTGCGCATTTTTCTGAAATGAGTCCAGGTAGTGTTACACT
CATAACACTGCTTTTGTCACAGTTTTGAAAATAAATAGAT
TTTTCTGATCCTTGAATTCTGTTGTGTTTATTTATACAGC
AACACATTGATATTGATTACGATGTTGTTTATAAATAAAC
ATAAATAAAATGTTTAATATTAAATGCTGAAATAAACTAA
ATAAAATTATATATGAAAAACATTTTTTTACCTTTGTTAT
TTTCATAATTATT

Segment Relationships
Protein Products
No data available
Supporting Sequences
Citations