Transcript

si:ch211-107e6.6-201

ID

ZDB-TSCRIPT-131113-2547

Name

si:ch211-107e6.6-201 Nomenclature History

Previous Names

ch211-107e6.6-001
si:ch211-107e6.6-001

Transcript Type

aberrant processed transcript

Annotation Status

nonsense mediated decay

Annotation Method

Ensembl

Associated With Genes

si:ch211-107e6.6 (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000155157 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|ENSDART00000155157.2|gene_biotype:protein_coding|ENSDARG00000096915.2 transcript_biotype:nonsense_mediated_decay cdna chromosome:GRCz11:25:10571090:10596291:1
GTTCGCTGTCAAACATATTCTCCGTACATAAACATAAACA
AACGCGCGACCTTTGAGGTAACTAATATGGCGTTTGATGA
TTTTGTTGACAGGAACTCTCAAGCAAAACTTAAAGGCATA
TTTTTAGTTACCCAAGTTTGGTCTAATACGCTCTGGGATA
CTTACATCTACTATTAGTCAAAGTATGCGTGTCGAGTACT
GAAAAGCGAAGCAAAATCTTCGCCCCCTTGTGACTGGCTA
TGGAAACGGTTTCTGTCACTCAGTCTGTTGCTGTTCGCAG
TGAGCCATCAAGCAAACCAGTCACACCAAAAAAGCTGTCC
ATACTGAGGTAAACGCCCTGTCAAGTTGACTTACAATATA
CTGTGAAGAAAGAGAGTAAAATAAAGCCCCCAGACATCTC
AGACAGTGTGTGGCTGTTTCTTTTGGCCTCTGTGGAGAAA
TGAATCCGAGCTGCAGGTTGTTCCTCTGCGCTGATGACAC
ACAGACTCACTGCTGAAAGGAAACAAGACGTCTTTAATGA
TATCAGCACCGCATCTCACTGTATAACACTCTCCTTTCAT
ATCTGCA

OTTDART00000056403 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000056403|OTTDARG00000039289|ZDB-GENE-131121-501 si:ch211-107e6.6|OTTDARP00000044223 CH211-107E6.6-001 LG_ CR391967.7 Danio rerio protein_coding NOVEL, 567 bp
GTTCGCTGTCAAACATATTCTCCGTACATAAACATAAACA
AACGCGCGACCTTTGAGGTAACTAATATGGCGTTTGATGA
TTTTGTTGACAGGAACTCTCAAGCAAAACTTAAAGGCATA
TTTTTAGTTACCCAAGTTTGGTCTAATACGCTCTGGGATA
CTTACATCTACTATTAGTCAAAGTATGCGTGTCGAGTACT
GAAAAGCGAAGCAAAATCTTCGCCCCCTTGTGACTGGCTA
TGGAAACGGTTTCTGTCACTCAGTCTGTTGCTGTTCGCAG
TGAGCCATCAAGCAAACCAGTCACACCAAAAAAGCTGTCC
ATACTGAGGTAAACGCCCTGTCAAGTTGACTTACAATATA
CTGTGAAGAAAGAGAGTAAAATAAAGCCCCCAGACATCTC
AGACAGTGTGTGGCTGTTTCTTTTGGCCTCTGTGGAGAAA
TGAATCCGAGCTGCAGGTTGTTCCTCTGCGCTGATGACAC
ACAGACTCACTGCTGAAAGGAAACAAGACGTCTTTAATGA
TATCAGCACCGCATCTCACTGTATAACACTCTCCTTTCAT
ATCTGCA

Related Transcripts

Transcripts related to si:ch211-107e6.6

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	si:ch211-107e6.6-201	Ensembl	567 nt
mRNA	si:ch211-107e6.6-202 (1) Ensembl	Ensembl	885 nt	Select Tool ZFIN BLAST
mRNA	si:ch211-107e6.6-203 (1) Ensembl	Ensembl	329 nt	Select Tool ZFIN BLAST

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations