Transcript

stk19-202

ID

ZDB-TSCRIPT-131113-1900

Name

stk19-202 Nomenclature History

Previous Names

stk19-002

Transcript Type

aberrant processed transcript

Annotation Status

nonsense mediated decay

Annotation Method

Ensembl

Associated With Genes

whr1 (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000129481 (1) [ Show ] (double-click sequence to select)

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>tpe|ENSDART00000129481.4|gene_biotype:protein_coding|ENSDARG00000086628.4 transcript_biotype:nonsense_mediated_decay gene_symbol:stk19 cdna chromosome:GRCz11:3:56601900:56617041:-1
GTGTGTTTTGATTACTTGTGAGCAAACATTTCAAACTCAA
AAGCAGAAGAAAATGAATTTTTGATAACTATAAAAAAAAT
CATATATTGGCTAGATGAGGAAAACGGATAAGTGAACTCT
GTAATAATAGCAGCAGTGTTTAAAATCAGCAAAATGAGCC
GAAAAAGAGCTCTGATCGCGGACACTTTCTGTTTGAAGAG
ACGCAGATGTGCAGCTGACAGTTTAACGGGAGAGACTCAC
GAATGATTTGCGTGAAAACGGCGAGCTGCTGATGTTCCAG
CTGGGCTTCGACTCGGAGGCCTTCGCTCTGGTGTTTGCTG
AGGATTACAGAGCCAAAGTCCTTCAGGAGGAAGCTGGAAG
AAAAACCCTGGGAGCCGCTGAGAAGTTTCTGGATAAGCTC
ATTCCCGGCTGCTCCGATTTAAGTTTCAACAAAGACAAAA
TGCTGAAAGAGTTCCTCTTCTCCGACTCTGAGATCACGCA
GCTGGTGAAGTCTGGTCTCCTCACTGTGAGAGATGCAGGC
AGCTGGTGGCTCTCAATCCCAAACTCTGGCAGATTCATTA
AGTACTTCATTAAAGGGCGTAAAGCTGTACTTAACATGGT
GAAGAAATCCAAATACAGTGAAATCTTAAGGACTGAGCTG
GAGGAGCGTCGCACAACTGCACAGGTTAAGTTCCAGATGA
AGTATCACGTTCATGATATCATTGGAGCAGACTTAGTAGA
ATGTATACAGACCACATCAGGGACAGTATTACGATACGTG
GACGGAAACAACTAACACTTTTTTTATGATTTTCTTATTG
TACAAAATGGATTGTAGATGTA

OTTDART00000051843 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000051843|OTTDARG00000036413|ZDB-GENE-000616-11 stk19|OTTDARP00000040736 stk19-002 LG_ BX901900.20 Danio rerio protein_coding KNOWN, 822 bp
GTGTGTTTTGATTACTTGTGAGCAAACATTTCAAACTCAA
AAGCAGAAGAAAATGAATTTTTGATAACTATAAAAAAAAT
CATATATTGGCTAGATGAGGAAAACGGATAAGTGAACTCT
GTAATAATAGCAGCAGTGTTTAAAATCAGCAAAATGAGCC
GAAAAAGAGCTCTGATCGCGGACACTTTCTGTTTGAAGAG
ACGCAGATGTGCAGCTGACAGTTTAACGGGAGAGACTCAC
GAATGATTTGCGTGAAAACGGCGAGCTGCTGATGTTCCAG
CTGGGCTTCGACTCGGAGGCCTTCGCTCTGGTGTTTGCTG
AGGATTACAGAGCCAAAGTCCTTCAGGAGGAAGCTGGAAG
AAAAACCCTGGGAGCCGCTGAGAAGTTTCTGGATAAGCTC
ATTCCCGGCTGCTCCGATTTAAGTTTCAACAAAGACAAAA
TGCTGAAAGAGTTCCTCTTCTCCGACTCTGAGATCACGCA
GCTGGTGAAGTCTGGTCTCCTCACTGTGAGAGATGCAGGC
AGCTGGTGGCTCTCAATCCCAAACTCTGGCAGATTCATTA
AGTACTTCATTAAAGGGCGTAAAGCTGTACTTAACATGGT
GAAGAAATCCAAATACAGTGAAATCTTAAGGACTGAGCTG
GAGGAGCGTCGCACAACTGCACAGGTTAAGTTCCAGATGA
AGTATCACGTTCATGATATCATTGGAGCAGACTTAGTAGA
ATGTATACAGACCACATCAGGGACAGTATTACGATACGTG
GACGGAAACAACTAACACTTTTTTTATGATTTTCTTATTG
TACAAAATGGATTGTAGATGTA

Related Transcripts

Transcripts related to whr1

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	stk19-202	Ensembl	822 nt
mRNA	stk19-201 (1) Ensembl	Ensembl	1,095 nt	Select Tool ZFIN BLAST
ncRNA	stk19-003 (1) Ensembl	Ensembl	786 nt	Select Tool ZFIN BLAST

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations