Transcript

reep6-202

ID
ZDB-TSCRIPT-131113-1831
Name
reep6-202 Nomenclature History
Previous Names
  • reep6-001
  • reep6-003
Transcript Type
aberrant processed transcript
Annotation Status
nonsense mediated decay
Annotation Method
Ensembl
Associated With Genes
Strain
TU
Non Reference Strain
Genome Resources
RNA Central
None
Note
None
Sequence
ENSDART00000153470 (1) [ Show ] (double-click sequence to select) [Download]
>tpe|ENSDART00000153470.3|gene_biotype:protein_coding|ENSDARG00000087349.5 transcript_biotype:nonsense_mediated_decay gene_symbol:reep6 cdna chromosome:GRCz11:11:7262004:7274378:1
AATTAAACGCCATTCATGTTCTTCGTATAACGACACGAGT
TTATTTTAAGTCACCATGTTTGCCATATTTACAAAGATTA
AGGACCGCGTCGAGGCTTTTTTAAACGAGAAGAATATTGT
CACCGACTGTCTCAATAAAATTGAAGAAAAAACTGGTATC
AAGAAACGTTACTTAGCGTACGGTGCTGCAGGTGTGACTG
GAGCATTTTTATTATTAGGATACGGCGCTTCTCTGATCTG
TAATCTGATTGGCTTTGTTTATCCTGCATATTTCTCTATC
AAAGCCATAGAAAGTCCTGGTAAAGAGGATGACACGCAGT
GGCTCACGTACTGGGTAATCTACGGCTTCTTCAGCGTGGG
AGAATTCTTCTCGGATATCTTTCTTCACTGGTTTCCATTC
TACTATGTATGCAAGTGCCTGTTCCTGTTGTGGTGTATGG
CTCCGGTCTCCTGGAATGGTTCTCAGGTTCTGTATAGGCA
TGTGGTCCGTCCATTTTTCCTGAAGCACGAAGCCGCAGTA
GACGGGATGGTCAGCAATATAAGCGTGAAGGCCATGTCAG
CAGCTGAGAACGTCACGAGAGAAGTCCTTCACACTCTGGT
AAGAAACCGGACTGTTGGCCCAGCTGAGTCTGAACCCAGA
AGCCTGCCTAGTTCTGCTCATACTGAACCCACTGTTGATT
AAACAATGTACAGGCGGCCAAAGTGATCTAAGAAGACAGA
ATACAACACGACATGCAAGAGATTGGTGAAAACCTAAACA
AAACTTTGACAACAGAAGTATTATATAGTCTCATTGCAAA
GACCTCACTGAGTGAATGGTAATTCACCTTCATCTGCACT
ATTTTAGACGTAGTGTTTTGTCAAAGGTGGAGTTCTGGAG
TTCAACGGTTAATATTGAAGTGCTATGAATACTTTCTGGA
TGCACTGTATATCTGCTTATAATTAGAATATGTCAGTGTC
CTCAACACAATAGTTTGGAAGTCATTTGTTGTTCACTGCA
CATATTTCGTCCACTGGCATTTAAAGGGAAAATTCAGCCA
AAAATCTAAATTCTGTCATCATTTACTCACTCTTCAAATG
TTCAGAACCTATTTGAGTTCCTTCAAGTAGAATATATTTT
TGTAAATGCTGGTAGTTGACACCCTATGACTTCAACAGGC
TCCAGTAACCTGCATTCTTCAAAAAATATCCTTTTTGTGT
TCAACAGAAGAAAGAAACTTATAAAGGTTTAAAAAGCAGT
TGGCGGAACGATCCCTTTAAATATAACTGAATAGAAAAAC
AAGACATTCAGCAGATGATATTTTGTTTATCATGTAGCAT
TAATTTGCATGTATTGCATCTGCAGGGATTTTGTAATACT
AATATTCTAATAAAAAGTTTATTCAGTCTTTCTATTGAA

OTTDART00000050332 (1) [ Show ] (double-click sequence to select) [Download]
>tpe|OTTDART00000050332|OTTDARG00000035377|ZDB-GENE-040912-98 reep6|OTTDARP00000039507 CH73-238C9.2-003 LG_ FP016232.7 Danio rerio protein_coding NOVEL, 1399 bp
AATTAAACGCCATTCATGTTCTTCGTATAACGACACGAGT
TTATTTTAAGTCACCATGTTTGCCATATTTACAAAGATTA
AGGACCGCGTCGAGGCTTTTTTAAACGAGAAGAATATTGT
CACCGACTGTCTCAATAAAATTGAAGAAAAAACTGGTATC
AAGAAACGTTACTTAGCGTACGGTGCTGCAGGTGTGACTG
GAGCATTTTTATTATTAGGATACGGCGCTTCTCTGATCTG
TAATCTGATTGGCTTTGTTTATCCTGCATATTTCTCTATC
AAAGCCATAGAAAGTCCTGGTAAAGAGGATGACACGCAGT
GGCTCACGTACTGGGTAATCTACGGCTTCTTCAGCGTGGG
AGAATTCTTCTCGGATATCTTTCTTCACTGGTTTCCATTC
TACTATGTATGCAAGTGCCTGTTCCTGTTGTGGTGTATGG
CTCCGGTCTCCTGGAATGGTTCTCAGGTTCTGTATAGGCA
TGTGGTCCGTCCATTTTTCCTGAAGCACGAAGCCGCAGTA
GACGGGATGGTCAGCAATATAAGCGTGAAGGCCATGTCAG
CAGCTGAGAACGTCACGAGAGAAGTCCTTCACACTCTGGT
AAGAAACCGGACTGTTGGCCCAGCTGAGTCTGAACCCAGA
AGCCTGCCTAGTTCTGCTCATACTGAACCCACTGTTGATT
AAACAATGTACAGGCGGCCAAAGTGATCTAAGAAGACAGA
ATACAACACGACATGCAAGAGATTGGTGAAAACCTAAACA
AAACTTTGACAACAGAAGTATTATATAGTCTCATTGCAAA
GACCTCACTGAGTGAATGGTAATTCACCTTCATCTGCACT
ATTTTAGACGTAGTGTTTTGTCAAAGGTGGAGTTCTGGAG
TTCAACGGTTAATATTGAAGTGCTATGAATACTTTCTGGA
TGCACTGTATATCTGCTTATAATTAGAATATGTCAGTGTC
CTCAACACAATAGTTTGGAAGTCATTTGTTGTTCACTGCA
CATATTTCGTCCACTGGCATTTAAAGGGAAAATTCAGCCA
AAAATCTAAATTCTGTCATCATTTACTCACTCTTCAAATG
TTCAGAACCTATTTGAGTTCCTTCAAGTAGAATATATTTT
TGTAAATGCTGGTAGTTGACACCCTATGACTTCAACAGGC
TCCAGTAACCTGCATTCTTCAAAAAATATCCTTTTTGTGT
TCAACAGAAGAAAGAAACTTATAAAGGTTTAAAAAGCAGT
TGGCGGAACGATCCCTTTAAATATAACTGAATAGAAAAAC
AAGACATTCAGCAGATGATATTTTGTTTATCATGTAGCAT
TAATTTGCATGTATTGCATCTGCAGGGATTTTGTAATACT
AATATTCTAATAAAAAGTTTATTCAGTCTTTCTATTGAA

Segment Relationships
Protein Products
No data available
Supporting Sequences
Citations