Transcript

efcc1-201

ID

ZDB-TSCRIPT-131113-1818

Name

efcc1-201 Nomenclature History

Previous Names

efcc1-001
dkey-57n24.4-001
si:dkey-57n24.4-001

Transcript Type

mRNA

Annotation Status

Annotation Method

Ensembl

Associated With Genes

efcc1 (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000111539 (1) [ Show ]

[Download]

>tpe|ENSDART00000111539.4|gene_biotype:protein_coding|ENSDARG00000077826.5 transcript_biotype:protein_coding cdna chromosome:GRCz11:11:26619133:26666627:-1
CAAGAGTGGGGCGGTCTGGTGTTCAGATAACATGAACTTG
GTATGCTGTTTGTATGCTTAGAGGATCTGCTGAATCCATT
AATCCATTTAGCCTCTATAAATGGAATTCTTGTGAAGTAA
AAAAGGATGGAAAAGTTGGACGCATGCGATCCATACAGCC
GACCCGCGCGCAGGACACAATGGATAGTGAGCACCCTGGC
GTATCATTACGGACTAGACCGTGGAGTGGAAAACGAAATT
ATAGTCCTCGCAACCGGGCTGGATCAATACCTCCAAGAGA
TATTTCATCACCTAGACTGTCAGGGAGATGGGAAAATACC
AACGGAGGATTTTAACATTCTTTGCGAGATTTTAGGACTC
GGTAAAGACTGTGATCTTGAGGAGTGCGCGGGGATATTGG
ATAATCTACCAAAAGAGTTCACCTTCAGGCAGTTTCACGC
AAAACTCTGCGGGTATTTCAGCACCAAAGCTGGATGTCAT
TATGAGAATGGGAGATTGCTGGTTGGTAAGGAGAGCGAAC
ACATAGAGACGCAGATCAGACTCCGGAGCCCTCTGAGGCG
GCGCGAGAAGCTGCTGTCTTTGGGTACCACCAGTAAGAGG
GAAAGCGAAGAGACGCCTTCTCCCACAGTAGACAGACACA
GGTCGGGTCGTAGGCAGCTGGGATCCTGCACACGAGAGTG
TTACGAGGAGATCGTGGCCCTTGAGGAGGCCGAGGACAGG
ATAGCCAAACTCGAGGAGGAAAACGCCAGTCTTAGGGAGT
TGGTGGAGGACATGCGGGCGGCTCTGCAGAGCAGTGATGC
GCGGTCACTGGCTTTGCAGGTGGGCCTGTGGAAAAGCCAC
TCGAAACATAAACCAGAAGGTGGCTGTTTCATCGCCCACC
AACGGAGAACAGTCCAGAAGCCCAACATTTCCGGTAGTCT
GAAGGACATCCAGAGTTTCCTGAGAGAAGTGGAGTTGCTC
CGGGCGTCCCGGGAGGGACAGGTCGAGGAGGCCATGTTCT
TCAATCAGAAGCTGGAGCAAGAACTGCGAATATCACGTGA
GACGTCGCTTATGCTAGAGGAATGTAACAGGACTTTAAAA
AAGGAGCAGGTGGAGATGAGGAAGAGGGTGGAGGAAGCCA
GACAAGCTGTGCTCAGCGGCCTTAAAAAAGTGAAGGAGCT
AGAGACCAAAGCCAGTCACATCCCTGTCCTGCAGAGGCAC
ATTGAGCAGCTCGAGATGGAGCTTCTGTACTACAGATCTG
AAGTGTCTAAAACATCAGTTGCATTCATCCACAAACTGGA
CAGACGGTATAATGGGGCCAGTCAGACGGTGTCCCGCTGT
TGCCTGGATACAGAGCAGGATCGACACTCACCAACAGGAC
GGGCAGAGACTGTGTCCGACACCATGGAGGAGCAACTGTT
TCGTTCAGTGGAGGGTCAAGCTGCGTCTGATGAAGAAGAG
GAGAGATGGACAGGAGAACAGCAGAGACAGGTGGACGAGG
TCAAGAGAATCCTCACCAGACTGTCCTGCTGCGGAGACAG
GTGTGATGAGAAGGCAGTGAAGAAGCTGTTGTCTCATTTT
GGAGATTCTCGCACAGAGGAGAGCCAGACGGCAGTGTTAG
AGCTGCTGGAGAAGGTCACAAGACTCAACAAACAACTGGA
GCTGAAGGAGAGTCAGGCCAGGAGGGCAGAGATGGACACT
GACCAGATGAGGGATGCACTGGTGCAGGAGCTGCAGCAGA
AGGCTGAGGAGACGGAGCTGCTTCACCTGGAGCTGCAGAT
GCTGGAAACAGAACGGGTGCGTTTGTCTTTGGTGGAGGAC
AAACTGATGGATGTGCTGCAGCTTCTCCAGCAGCTGCGGG
AGCTGAACGTGTCCAGAAGATCTTTAGGAAAGATTTTACT
CAGCACATTGGAGTCCTGCAGTGATCCTCAGCATGGGAAA
GCGCATATTTTAGAGGTGCTGAACGCTCTCTGTCATGAAC
TGGCCGCGTGTGAAATCCTGTCTAACGGCGAGACCATAGA
GAGATCACAGAGTCACCAGTCTCTCACCAACTCGCTGCTC
ATCTCCTGCTAAATCTCCGTTACATTGCTGCCATCTGATG
GTCAATGGATGATACGCACTAACTAACAAGCCACGTTGGG
CAATGGGACCAAAATTAGCCATGCATTTGTCTTTGTTTAT
ATGTCTGTGTATAGTTGTTTAAATCATTTAGCTCATTTTC
ATTTATAATGACACATATTTCTGTAAATAGTTTGTGTAAA
TCATTTAGCGTATCATTTAGAATGAAACACATTACTCATT
TTAAACAAGGTAAGACACTGCAGGTAAATATGGTGAAAAA
AAAAAGAAATAAAATTAATAAATTGTAAATAGTTAGTTGC
ATACTTTCCCGGTTAATGTATTATACTTAGTGGTGTAAAG
TAACAAATTACTAATACTCAAATTACTGTAATTAGGAAGA
AATTGTAATT

OTTDART00000050239 (1) [ Show ]

[Download]

>tpe|OTTDART00000050239|OTTDARG00000035320|ZDB-GENE-120813-3 efcc1|OTTDARP00000047443 DKEY-57N24.4-001 LG_ CU467888.19 Danio rerio protein_coding NOVEL, 2450 bp
CAAGAGTGGGGCGGTCTGGTGTTCAGATAACATGAACTTG
GTATGCTGTTTGTATGCTTAGAGGATCTGCTGAATCCATT
AATCCATTTAGCCTCTATAAATGGAATTCTTGTGAAGTAA
AAAAGGATGGAAAAGTTGGACGCATGCGATCCATACAGCC
GACCCGCGCGCAGGACACAATGGATAGTGAGCACCCTGGC
GTATCATTACGGACTAGACCGTGGAGTGGAAAACGAAATT
ATAGTCCTCGCAACCGGGCTGGATCAATACCTCCAAGAGA
TATTTCATCACCTAGACTGTCAGGGAGATGGGAAAATACC
AACGGAGGATTTTAACATTCTTTGCGAGATTTTAGGACTC
GGTAAAGACTGTGATCTTGAGGAGTGCGCGGGGATATTGG
ATAATCTACCAAAAGAGTTCACCTTCAGGCAGTTTCACGC
AAAACTCTGCGGGTATTTCAGCACCAAAGCTGGATGTCAT
TATGAGAATGGGAGATTGCTGGTTGGTAAGGAGAGCGAAC
ACATAGAGACGCAGATCAGACTCCGGAGCCCTCTGAGGCG
GCGCGAGAAGCTGCTGTCTTTGGGTACCACCAGTAAGAGG
GAAAGCGAAGAGACGCCTTCTCCCACAGTAGACAGACACA
GGTCGGGTCGTAGGCAGCTGGGATCCTGCACACGAGAGTG
TTACGAGGAGATCGTGGCCCTTGAGGAGGCCGAGGACAGG
ATAGCCAAACTCGAGGAGGAAAACGCCAGTCTTAGGGAGT
TGGTGGAGGACATGCGGGCGGCTCTGCAGAGCAGTGATGC
GCGGTCACTGGCTTTGCAGGTGGGCCTGTGGAAAAGCCAC
TCGAAACATAAACCAGAAGGTGGCTGTTTCATCGCCCACC
AACGGAGAACAGTCCAGAAGCCCAACATTTCCGGTAGTCT
GAAGGACATCCAGAGTTTCCTGAGAGAAGTGGAGTTGCTC
CGGGCGTCCCGGGAGGGACAGGTCGAGGAGGCCATGTTCT
TCAATCAGAAGCTGGAGCAAGAACTGCGAATATCACGTGA
GACGTCGCTTATGCTAGAGGAATGTAACAGGACTTTAAAA
AAGGAGCAGGTGGAGATGAGGAAGAGGGTGGAGGAAGCCA
GACAAGCTGTGCTCAGCGGCCTTAAAAAAGTGAAGGAGCT
AGAGACCAAAGCCAGTCACATCCCTGTCCTGCAGAGGCAC
ATTGAGCAGCTCGAGATGGAGCTTCTGTACTACAGATCTG
AAGTGTCTAAAACATCAGTTGCATTCATCCACAAACTGGA
CAGACGGTATAATGGGGCCAGTCAGACGGTGTCCCGCTGT
TGCCTGGATACAGAGCAGGATCGACACTCACCAACAGGAC
GGGCAGAGACTGTGTCCGACACCATGGAGGAGCAACTGTT
TCGTTCAGTGGAGGGTCAAGCTGCGTCTGATGAAGAAGAG
GAGAGATGGACAGGAGAACAGCAGAGACAGGTGGACGAGG
TCAAGAGAATCCTCACCAGACTGTCCTGCTGCGGAGACAG
GTGTGATGAGAAGGCAGTGAAGAAGCTGTTGTCTCATTTT
GGAGATTCTCGCACAGAGGAGAGCCAGACGGCAGTGTTAG
AGCTGCTGGAGAAGGTCACAAGACTCAACAAACAACTGGA
GCTGAAGGAGAGTCAGGCCAGGAGGGCAGAGATGGACACT
GACCAGATGAGGGATGCACTGGTGCAGGAGCTGCAGCAGA
AGGCTGAGGAGACGGAGCTGCTTCACCTGGAGCTGCAGAT
GCTGGAAACAGAACGGGTGCGTTTGTCTTTGGTGGAGGAC
AAACTGATGGATGTGCTGCAGCTTCTCCAGCAGCTGCGGG
AGCTGAACGTGTCCAGAAGATCTTTAGGAAAGATTTTACT
CAGCACATTGGAGTCCTGCAGTGATCCTCAGCATGGGAAA
GCGCATATTTTAGAGGTGCTGAACGCTCTCTGTCATGAAC
TGGCCGCGTGTGAAATCCTGTCTAACGGCGAGACCATAGA
GAGATCACAGAGTCACCAGTCTCTCACCAACTCGCTGCTC
ATCTCCTGCTAAATCTCCGTTACATTGCTGCCATCTGATG
GTCAATGGATGATACGCACTAACTAACAAGCCACGTTGGG
CAATGGGACCAAAATTAGCCATGCATTTGTCTTTGTTTAT
ATGTCTGTGTATAGTTGTTTAAATCATTTAGCTCATTTTC
ATTTATAATGACACATATTTCTGTAAATAGTTTGTGTAAA
TCATTTAGCGTATCATTTAGAATGAAACACATTACTCATT
TTAAACAAGGTAAGACACTGCAGGTAAATATGGTGAAAAA
AAAAAGAAATAAAATTAATAAATTGTAAATAGTTAGTTGC
ATACTTTCCCGGTTAATGTATTATACTTAGTGGTGTAAAG
TAACAAATTACTAATACTCAAATTACTGTAATTAGGAAGA
AATTGTAATT

Related Transcripts

No data available

Transcripts related to efcc1

Type	Name	Annotation Method	Has Havana Data	Length (nt)	Analysis
mRNA	efcc1-201	Ensembl		2,450 nt
mRNA	efcc1-202 (1) Ensembl	Ensembl		891 nt	Select Tool ZFIN BLAST

1 - 2 of 2

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations

Include unpublished citations