Transcript

si:ch211-178n15.1-201

ID
ZDB-TSCRIPT-131113-1371
Name
si:ch211-178n15.1-201 Nomenclature History
Previous Names
  • ch211-178n15.1-002
  • si:ch211-178n15.1-002
Transcript Type
aberrant processed transcript
Annotation Status
nonsense mediated decay
Annotation Method
Ensembl
Associated With Genes
Strain
TU
Non Reference Strain
Genome Resources
RNA Central
None
Note
None
Sequence
ENSDART00000154107 (1) [ Show ] (double-click sequence to select) [Download]
>tpe|ENSDART00000154107.2|gene_biotype:protein_coding|ENSDARG00000097617.3 transcript_biotype:nonsense_mediated_decay cdna chromosome:GRCz11:2:56066026:56095275:-1
CTCCCTCACACTCCCTCCTTCTCCCTCTCTCAAGCGGCGT
AGAATCCTGGCTGTGTTTAATTGTCGAGTGGCGAGATCTA
AAGGGAGAGATCGGGAATCACATGGAGCCGCTGCGTCTGT
CAGCGCTTTACGAGCCCCAGCCCCGACAGAGGCGCGGAGA
GGAGCCGTAGGAAGGAAGTGTTTGGGAGCGGGGAATTTTT
TTTTTAACGCAGTGGAAGGTGTAGACAGAGGTGAAAGACT
GTAGGAGAGTTGGAGAAGAAGAAAAAAGGGAAAAGAAAAG
AGGCCCACCGTTTGGAGGAAAGGGCAATAAGCAGAGAAAA
AAAGTGGGAAAACAAGAGTTAGAAAAACCAGAGGAAGGAA
GGGGGAGGTGAGAGAGAGACGGCAGAACAAAAAAAAAAAA
GTTTGGGAATAGGGAAGTGCAAGAGAGAGAGGGAGACAGT
TATACGCAGATGAGAAAAGCAGACGCAGGGAAGTGGATGG
AGCAAGAAACTGTTGTTTTTTTAGTTCTTTAGGTCGGGGA
ATGCACTCGGAGGATACAGCGACGGGATTACGAACGCCTT
CCTGCCACTTTTGCCTGCAGCAGGAATCCAGACGCACTAT
TGAGGGATCATGTCTGCGCATGGAGCCCACAGTGGCACCG
TTTCCAAAGGAATTATGGATAGACGGAGCACACACGACTG
GTGTTTATCCACCAAAACAAGTTTACACCGAGGAACTACG
ACATCCGTGTTACTCCAGATGGGATCCTCCATGTGTGCGA
GAAATACAAAGGGAATGCGGATGCATCCAGAGATGGTATT
ACCCTGAGATTGCATATCCCTACAATGGTGATCATGTTTG
GAGAGTTAGAGGTCAGCACTATTATGGCCACCTATCAGAA
TTTCAGCAATGCACAAGACGACGGGTTTCTTTTAGGCATC
CCCAAGAGGAGAGACCTGCGCTCATCAGACAATCGCTATC
AAGTCCTGGAAAGCTGCACTGTAACGGGACGACCTCCGAA
CAAGCGTTTTTTCCCACCGAAGTGCCCTCCAGTAAGTTAA
TCCGCTCAGGACCGCAGCGGGACGTAAAAAAGACGTTTCA
TGGGGACTCAAAGAGTCTGGAGGGTCGAGGGAATCAGAGG
AAGAGCCAGGGAACCGTACGGGAACAGATCAAACAAGTGG
TCAATGAGCTGGAGGAAGTGCTGGGTGGTCTCAAACAGGT
CCAGTTGGAGATGAAAGAGGTCGTCCAACAGATTGACGTT
CTGACGTCCAACATTGACCTCAGTGAAGAGCAACCAACAC
CATCCAATGGACTTCCACAAGATGCCATGAGAAGCAGTCA
GACAGACGTTGTGGCTTTAATACATCATTCAAATGGAGAT
GAAAACGACACGTCAACATCCAGTTCCTCTCTCACGCACA
GCCCTTCGGATTTACTCCACATTAACAGCCCTTCACCAAT
GAGAAACCACTCAAACTCGTCCCCTACTAAACAACATGAC
ATTAACATTGAGGATAAAAGCAGCAAACACAGCTCAGAGA
CTCAAAGGACTCACAGGACGGCCAACGGAAACTGCGTAGC
ACATCGAATAGCTAAGAAAGTCCAACTGGAAACCCACAAA
CCCCCTATAGTCCCAGTGGTGTGCACTAATAACTCCAATA
AAACCCACCGGCCGCCGCCTTATCCTCAGAACGGACAGGT
GAAAATGAGGACGCCTCCTTATCCAGGAAAACATAAGACG
CTGTCGTCCACTGTGGTGTAAGGATACCAAACTAACTCAA
GCTTTACTCAAAGAGGACAACACACTTACTGTCAAACATC
ATGTATATACTCACAGATTCATGCTCACACACACTTTAAC
CCATCAGCGAGTAAATCATTGATGGTGATGAAACTCAGGG
GACTGATGCCACACAACCCAGCTGACCCATAGCGGAGGAT
GGAGGAAAACCGGGGCTGATGGGCAGTGACTGTATTTCCA
ATGGAAAACTCCAGAAACATCTCAAAACACACACATTCAC
ACACACATACACCTGCTGAAAACTAGTTTAGAGCAACTTA
AACGTTATGAAATGACAACCAAAGTTTATTTACTTAGGAT
GTATTTCTGATTGAAACAGGAAGTCAATGAGGGAACGATT
GGTCAAAGGGGGTGGGGTTATAAAGCAGTAGGTTTATTTA
GAGGCGGAGCAAGTTGTTATATTTTGAGGAAAGATTATGA
AAATTGATTTGCATCACTAGCTGGGTCTCCATCCATCTGT
TTTTAAAGCTGCAGTAGGTGATCAGCCAAAATGCTATTCG
TTACCGTATGTTCACACCG

OTTDART00000059178 (1) [ Show ] (double-click sequence to select) [Download]
>tpe|OTTDART00000059178|OTTDARG00000041026|ZDB-GENE-131121-24 si:ch211-178n15.1|OTTDARP00000046199 CH211-178N15.1-002 LG_ CR788291.19 Danio rerio protein_coding NOVEL, 2299 bp
CTCCCTCACACTCCCTCCTTCTCCCTCTCTCAAGCGGCGT
AGAATCCTGGCTGTGTTTAATTGTCGAGTGGCGAGATCTA
AAGGGAGAGATCGGGAATCACATGGAGCCGCTGCGTCTGT
CAGCGCTTTACGAGCCCCAGCCCCGACAGAGGCGCGGAGA
GGAGCCGTAGGAAGGAAGTGTTTGGGAGCGGGGAATTTTT
TTTTTAACGCAGTGGAAGGTGTAGACAGAGGTGAAAGACT
GTAGGAGAGTTGGAGAAGAAGAAAAAAGGGAAAAGAAAAG
AGGCCCACCGTTTGGAGGAAAGGGCAATAAGCAGAGAAAA
AAAGTGGGAAAACAAGAGTTAGAAAAACCAGAGGAAGGAA
GGGGGAGGTGAGAGAGAGACGGCAGAACAAAAAAAAAAAA
GTTTGGGAATAGGGAAGTGCAAGAGAGAGAGGGAGACAGT
TATACGCAGATGAGAAAAGCAGACGCAGGGAAGTGGATGG
AGCAAGAAACTGTTGTTTTTTTAGTTCTTTAGGTCGGGGA
ATGCACTCGGAGGATACAGCGACGGGATTACGAACGCCTT
CCTGCCACTTTTGCCTGCAGCAGGAATCCAGACGCACTAT
TGAGGGATCATGTCTGCGCATGGAGCCCACAGTGGCACCG
TTTCCAAAGGAATTATGGATAGACGGAGCACACACGACTG
GTGTTTATCCACCAAAACAAGTTTACACCGAGGAACTACG
ACATCCGTGTTACTCCAGATGGGATCCTCCATGTGTGCGA
GAAATACAAAGGGAATGCGGATGCATCCAGAGATGGTATT
ACCCTGAGATTGCATATCCCTACAATGGTGATCATGTTTG
GAGAGTTAGAGGTCAGCACTATTATGGCCACCTATCAGAA
TTTCAGCAATGCACAAGACGACGGGTTTCTTTTAGGCATC
CCCAAGAGGAGAGACCTGCGCTCATCAGACAATCGCTATC
AAGTCCTGGAAAGCTGCACTGTAACGGGACGACCTCCGAA
CAAGCGTTTTTTCCCACCGAAGTGCCCTCCAGTAAGTTAA
TCCGCTCAGGACCGCAGCGGGACGTAAAAAAGACGTTTCA
TGGGGACTCAAAGAGTCTGGAGGGTCGAGGGAATCAGAGG
AAGAGCCAGGGAACCGTACGGGAACAGATCAAACAAGTGG
TCAATGAGCTGGAGGAAGTGCTGGGTGGTCTCAAACAGGT
CCAGTTGGAGATGAAAGAGGTCGTCCAACAGATTGACGTT
CTGACGTCCAACATTGACCTCAGTGAAGAGCAACCAACAC
CATCCAATGGACTTCCACAAGATGCCATGAGAAGCAGTCA
GACAGACGTTGTGGCTTTAATACATCATTCAAATGGAGAT
GAAAACGACACGTCAACATCCAGTTCCTCTCTCACGCACA
GCCCTTCGGATTTACTCCACATTAACAGCCCTTCACCAAT
GAGAAACCACTCAAACTCGTCCCCTACTAAACAACATGAC
ATTAACATTGAGGATAAAAGCAGCAAACACAGCTCAGAGA
CTCAAAGGACTCACAGGACGGCCAACGGAAACTGCGTAGC
ACATCGAATAGCTAAGAAAGTCCAACTGGAAACCCACAAA
CCCCCTATAGTCCCAGTGGTGTGCACTAATAACTCCAATA
AAACCCACCGGCCGCCGCCTTATCCTCAGAACGGACAGGT
GAAAATGAGGACGCCTCCTTATCCAGGAAAACATAAGACG
CTGTCGTCCACTGTGGTGTAAGGATACCAAACTAACTCAA
GCTTTACTCAAAGAGGACAACACACTTACTGTCAAACATC
ATGTATATACTCACAGATTCATGCTCACACACACTTTAAC
CCATCAGCGAGTAAATCATTGATGGTGATGAAACTCAGGG
GACTGATGCCACACAACCCAGCTGACCCATAGCGGAGGAT
GGAGGAAAACCGGGGCTGATGGGCAGTGACTGTATTTCCA
ATGGAAAACTCCAGAAACATCTCAAAACACACACATTCAC
ACACACATACACCTGCTGAAAACTAGTTTAGAGCAACTTA
AACGTTATGAAATGACAACCAAAGTTTATTTACTTAGGAT
GTATTTCTGATTGAAACAGGAAGTCAATGAGGGAACGATT
GGTCAAAGGGGGTGGGGTTATAAAGCAGTAGGTTTATTTA
GAGGCGGAGCAAGTTGTTATATTTTGAGGAAAGATTATGA
AAATTGATTTGCATCACTAGCTGGGTCTCCATCCATCTGT
TTTTAAAGCTGCAGTAGGTGATCAGCCAAAATGCTATTCG
TTACCGTATGTTCACACCG

Segment Relationships
Protein Products
No data available
Supporting Sequences
Citations