Transcript

hoxb3a-204

ID

ZDB-TSCRIPT-131113-1355

Name

hoxb3a-204 Nomenclature History

Previous Names

hoxb3a-004

Transcript Type

mRNA

Annotation Status

Annotation Method

Ensembl

Associated With Genes

hoxb3a (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000153512 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|ENSDART00000153512.2|gene_biotype:protein_coding|ENSDARG00000029263.10 transcript_biotype:protein_coding gene_symbol:hoxb3a cdna chromosome:GRCz11:3:23742868:23748060:1
CGAATCGGGAGCCCACCTCGGATTATGATGTTCAATTTTG
CGCCTTGAGGAAAAGGCGAGGGGAGATTGAAGGCGAAATC
TGAGGCCATTGTTATCTGCGAGCAGGGCGTACCAGTCGAC
AGGGCGGCCAGGAGCAGTGCTGCCTGTCCATTTGCAGCCC
CCCTCGCATACCTCAGATCTTTCATGCTAGACCGTCTCCC
CCTTTCGCGAGCCGAGGGGAATCGTCCAGCAGCGCCCGCA
CTCTGGCGCGGGGCAGCCGTGCTCGAGATACCCGGTGTTT
GACGCGTACTGTCTGGCTGGAATATCGAAACTGGTATGAG
CTTTGGGCTTTCTTATTGATTGCAGCGTGGCCGAATGTGG
AAAATATGATGCCTGCCCGCGCATCTCTCGTCAGAGGCTA
AGGTCAGCTTCCAAGAGGCCATTGGAAAGAGACCGTCACG
TGACAACTGGTGCCAATGTTCTTCCAGAAGGTCGTCAGGA
CCCTGGTAGCCAGCAACTCGATTTTTGGAAATGCAGAAAA
CGACCTACTACGACAACTCGACACTTTTCGGAGGATACTC
GTATCAGGGGGCAAACGGTTTTGGCTATGATGCCCCGGCA
CCAGCCTTCCAGAACTCAGCACATCTTGAGGGTGACTACC
AAAGGTCTGCATGCTCCCTACAGTCGCTCGGCACCAGTGC
ACCCCCACAGCCTCAGCATGCCAAGACGAAAGAGCTTAAT
GGCAGCTGCATGCGGCCCAGTCTGCCACCTGAACACCATC
CACCCCCCCAGGTTTCCCCTCCTCAGAACACTGTAAATGT
TGCTGCCACGAATGCCACCCAGCAGCCAGGTGGCAGTGGT
GGTGGTGGGGGGGCTGGCTCTGGGGGAACATCCAAATCAT
CATCCAAGTCATCCTCTATGGCCACAAACCCAACTCTCAC
GAAGCAAATCTTTCCTTGGATGAAGGAGTCACGTCAGAAC
ACCAAGCAAAAAAACAGCTCCCCTAGTGCAAGCTCAGCTA
ATGCGGAGAGCAGCGGTGGTGAGAAAAGCCCTCCGGGTTC
TGCAGCTTCCAAGAGAGCACGCACCGCTTACACCAGCGCA
CAGCTGGTGGAGCTCGAGAAGGAGTTTCACTTCAACCGAT
ACCTGTGCCGGCCGAGGCGTGTGGAAATGGCCAATCTGCT
AAACCTCAGTGAGCGGCAGATCAAGATTTGGTTCCAGAAC
AGGCGGATGAAGTACAAGAAAGATCAAAAGTCAAAAGGCA
TTGGTTCATCATCAGGGGGGCCTTCTCCTACAGGAAGTCC
ACCTCTTCCAATGCAGTCCTCAGCTGGTTTTATGAACTCT
ATGCACTCAATGGGCAGTTACGATGCTCCCTCTCCACCAT
CTTTTAACAAACCCCATCAAAATGCATACGCCATGTCAAC
AGCCTATCAGAACCCAATGAAAGGTTGCCCACCCCAACAG
AAGTATGGAAACACACCACCGGATTATGACCCACACGGGC
TACAGGGTAACAGTGGCAACTATGGGACACCAAACATGCA
GGGTAGCCCTGTGTATGTAGGAGGTAACTATGTTGATGCC
ATGCCTGCCACTGGGCCTTCTATGTATGGCCTCAATCACC
TACCACACCACCAGTCGGCAAGCATGGACTACAACGGTGC
CACACAGATGTCAGCGAACCAGCACCATGGACCTTGTGAC
CCACATCCGACATACACGGATCTGTCTGCACACCATCCTT
CTCAGGGTAGAATCCAAGAAGCACCCAAGTTGACTCATCT
GTAG

OTTDART00000059124 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000059124|OTTDARG00000019760|ZDB-GENE-990415-104 hoxb3a|OTTDARP00000046166 hoxb3a-004 LG_none BX927395.19,CR751227.13 Danio rerio protein_coding KNOWN, 1764 bp
CGAATCGGGAGCCCACCTCGGATTATGATGTTCAATTTTG
CGCCTTGAGGAAAAGGCGAGGGGAGATTGAAGGCGAAATC
TGAGGCCATTGTTATCTGCGAGCAGGGCGTACCAGTCGAC
AGGGCGGCCAGGAGCAGTGCTGCCTGTCCATTTGCAGCCC
CCCTCGCATACCTCAGATCTTTCATGCTAGACCGTCTCCC
CCTTTCGCGAGCCGAGGGGAATCGTCCAGCAGCGCCCGCA
CTCTGGCGCGGGGCAGCCGTGCTCGAGATACCCGGTGTTT
GACGCGTACTGTCTGGCTGGAATATCGAAACTGGTATGAG
CTTTGGGCTTTCTTATTGATTGCAGCGTGGCCGAATGTGG
AAAATATGATGCCTGCCCGCGCATCTCTCGTCAGAGGCTA
AGGTCAGCTTCCAAGAGGCCATTGGAAAGAGACCGTCACG
TGACAACTGGTGCCAATGTTCTTCCAGAAGGTCGTCAGGA
CCCTGGTAGCCAGCAACTCGATTTTTGGAAATGCAGAAAA
CGACCTACTACGACAACTCGACACTTTTCGGAGGATACTC
GTATCAGGGGGCAAACGGTTTTGGCTATGATGCCCCGGCA
CCAGCCTTCCAGAACTCAGCACATCTTGAGGGTGACTACC
AAAGGTCTGCATGCTCCCTACAGTCGCTCGGCACCAGTGC
ACCCCCACAGCCTCAGCATGCCAAGACGAAAGAGCTTAAT
GGCAGCTGCATGCGGCCCAGTCTGCCACCTGAACACCATC
CACCCCCCCAGGTTTCCCCTCCTCAGAACACTGTAAATGT
TGCTGCCACGAATGCCACCCAGCAGCCAGGTGGCAGTGGT
GGTGGTGGGGGGGCTGGCTCTGGGGGAACATCCAAATCAT
CATCCAAGTCATCCTCTATGGCCACAAACCCAACTCTCAC
GAAGCAAATCTTTCCTTGGATGAAGGAGTCACGTCAGAAC
ACCAAGCAAAAAAACAGCTCCCCTAGTGCAAGCTCAGCTA
ATGCGGAGAGCAGCGGTGGTGAGAAAAGCCCTCCGGGTTC
TGCAGCTTCCAAGAGAGCACGCACCGCTTACACCAGCGCA
CAGCTGGTGGAGCTCGAGAAGGAGTTTCACTTCAACCGAT
ACCTGTGCCGGCCGAGGCGTGTGGAAATGGCCAATCTGCT
AAACCTCAGTGAGCGGCAGATCAAGATTTGGTTCCAGAAC
AGGCGGATGAAGTACAAGAAAGATCAAAAGTCAAAAGGCA
TTGGTTCATCATCAGGGGGGCCTTCTCCTACAGGAAGTCC
ACCTCTTCCAATGCAGTCCTCAGCTGGTTTTATGAACTCT
ATGCACTCAATGGGCAGTTACGATGCTCCCTCTCCACCAT
CTTTTAACAAACCCCATCAAAATGCATACGCCATGTCAAC
AGCCTATCAGAACCCAATGAAAGGTTGCCCACCCCAACAG
AAGTATGGAAACACACCACCGGATTATGACCCACACGGGC
TACAGGGTAACAGTGGCAACTATGGGACACCAAACATGCA
GGGTAGCCCTGTGTATGTAGGAGGTAACTATGTTGATGCC
ATGCCTGCCACTGGGCCTTCTATGTATGGCCTCAATCACC
TACCACACCACCAGTCGGCAAGCATGGACTACAACGGTGC
CACACAGATGTCAGCGAACCAGCACCATGGACCTTGTGAC
CCACATCCGACATACACGGATCTGTCTGCACACCATCCTT
CTCAGGGTAGAATCCAAGAAGCACCCAAGTTGACTCATCT
GTAG

Related Transcripts

Transcripts related to hoxb3a

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	hoxb3a-201 (1) Ensembl	Ensembl	3,411 nt	Select Tool ZFIN BLAST
mRNA	hoxb3a-202 (1) Ensembl	Ensembl	593 nt	Select Tool ZFIN BLAST
mRNA	hoxb3a-203 (1) Ensembl	Ensembl	539 nt	Select Tool ZFIN BLAST
mRNA	hoxb3a-204	Ensembl	1,764 nt
mRNA	hoxb3a-205 (1) Ensembl	Ensembl	3,483 nt	Select Tool ZFIN BLAST
mRNA	hoxb3a-206 (1) Ensembl	Ensembl	3,785 nt	Select Tool ZFIN BLAST
mRNA	hoxb3a-207 (1) Ensembl	Ensembl	3,681 nt	Select Tool ZFIN BLAST
mRNA	hoxb3a-208 (1) Ensembl	Ensembl	3,133 nt	Select Tool ZFIN BLAST
mRNA	ottdart00000001814 (1)	Havana	2,771 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations