Transcript

gdpd5b-205

ID

ZDB-TSCRIPT-131113-1214

Name

gdpd5b-205 Nomenclature History

Previous Names

gdpd5b-003
dkey-52l18.5-003

Transcript Type

aberrant processed transcript

Annotation Status

nonsense mediated decay

Annotation Method

Ensembl

Associated With Genes

gdpd5b (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000155417 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|ENSDART00000155417.3|gene_biotype:protein_coding|ENSDARG00000076962.5 transcript_biotype:nonsense_mediated_decay gene_symbol:gdpd5b cdna chromosome:GRCz11:15:29387910:29454027:1
TCCTTCTAGATTCTTCTGTCGGGGGATGCAGAGGCTTGTT
CCCACATCTCACATCCTCCCCCAACAGTGCCACGTCAAAC
TGAATTCTTTTTCTGGCTGCGGGTGTGGTGCAGAAACGGT
AAAAGAAGTCAAACAGGTTTGGGACATGTCATGGATGGCA
GTCATTTGTTGCGCTGCTGCTTGAGGAGGTCTGAATTGCC
TGCGGACACATTGCACCATGGTCAATTTGGGTCCTTGGCG
GTCATTGGGATGATAGTGAAGCGGGTTGGAGTCTGGATTG
AAGGAGCATGGTGAAGCACCAACCATTACAGGTCTACGAG
AGACAGCTGTGTTTGTCATGTCTAACCGGGATCTACGGCT
GCCGCTGGAAACGTTACCAGCGGTCACATGATGACACCAC
CAAGTGAGCGAGGACAAGAGTCCACGAGGGGGGACGTTCT
GCTTTAGAAGACTTTAATCAAAACATTGCAGTGGGAGTGT
TTGTGGTCCCTCATTCTCTTCTTCACTTTCTCCTTGTTAC
TGGTGTGGTTTTACTTCTGGTGGGAAGCCCACAATGACTA
CAGCGAGTTTAATTGGTTTTTATATAACCGTTCAGGGGAG
TGGAGTGATGGAACCGTTCCCATATTGGCCACCACTGCAG
CTGGTTTCACCTATATTGCATTTTTAATGATTTTAGCCCT
GTGCCATGTAGCTGTTGGGCAGCAGTTAAACCTCCACTGG
GTCCACAAGGTACCTGTCA

OTTDART00000057533 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000057533|OTTDARG00000040108|ZDB-GENE-030131-6028 gdpd5b|OTTDARP00000045086 DKEY-52L18.5-003 LG_none BX537138.6,BX324227.16 Danio rerio protein_coding NOVEL, 739 bp
TCCTTCTAGATTCTTCTGTCGGGGGATGCAGAGGCTTGTT
CCCACATCTCACATCCTCCCCCAACAGTGCCACGTCAAAC
TGAATTCTTTTTCTGGCTGCGGGTGTGGTGCAGAAACGGT
AAAAGAAGTCAAACAGGTTTGGGACATGTCATGGATGGCA
GTCATTTGTTGCGCTGCTGCTTGAGGAGGTCTGAATTGCC
TGCGGACACATTGCACCATGGTCAATTTGGGTCCTTGGCG
GTCATTGGGATGATAGTGAAGCGGGTTGGAGTCTGGATTG
AAGGAGCATGGTGAAGCACCAACCATTACAGGTCTACGAG
AGACAGCTGTGTTTGTCATGTCTAACCGGGATCTACGGCT
GCCGCTGGAAACGTTACCAGCGGTCACATGATGACACCAC
CAAGTGAGCGAGGACAAGAGTCCACGAGGGGGGACGTTCT
GCTTTAGAAGACTTTAATCAAAACATTGCAGTGGGAGTGT
TTGTGGTCCCTCATTCTCTTCTTCACTTTCTCCTTGTTAC
TGGTGTGGTTTTACTTCTGGTGGGAAGCCCACAATGACTA
CAGCGAGTTTAATTGGTTTTTATATAACCGTTCAGGGGAG
TGGAGTGATGGAACCGTTCCCATATTGGCCACCACTGCAG
CTGGTTTCACCTATATTGCATTTTTAATGATTTTAGCCCT
GTGCCATGTAGCTGTTGGGCAGCAGTTAAACCTCCACTGG
GTCCACAAGGTACCTGTCA

Related Transcripts

Transcripts related to gdpd5b

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	gdpd5b-203 (1) Ensembl	Ensembl	5,086 nt	Select Tool
aberrant processed transcript	gdpd5b-205	Ensembl	739 nt
mRNA	gdpd5b-201 (1) Ensembl	Ensembl	2,341 nt	Select Tool ZFIN BLAST
mRNA	gdpd5b-202 (1) Ensembl	Ensembl	474 nt	Select Tool
mRNA	gdpd5b-207 (1) Ensembl	Ensembl	2,710 nt	Select Tool ZFIN BLAST
mRNA	gdpd5b-208 (1) Ensembl	Ensembl	2,656 nt	Select Tool ZFIN BLAST
mRNA	gdpd5b-209 (1) Ensembl	Ensembl	2,401 nt	Select Tool ZFIN BLAST
ncRNA	gdpd5b-002 (1) Ensembl	Ensembl	588 nt	Select Tool
ncRNA	gdpd5b-004 (1) Ensembl	Ensembl	495 nt	Select Tool

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations