Transcript

si:ch211-217n8.3-005

ID

ZDB-TSCRIPT-131113-1160

Name

si:ch211-217n8.3-005 Nomenclature History

Previous Names

ch211-217n8.3-005

Transcript Type

ncRNA

Annotation Status

retained intron

Annotation Method

Ensembl

Associated With Genes

si:ch211-217n8.3 (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000153990 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|ENSDART00000153990.3|gene_biotype:processed_transcript|ENSDARG00000096955.3 transcript_biotype:retained_intron  ncrna chromosome:GRCz11:15:17379665:17382582:-1
CTGCACTCTCAGCACCGCATTTTTAGGACCGCATCTTTAG
GACCGCATCTTTAGGACCCTAGTTTTTTGTGATAGCGTCA
ACTGTCGGATTGGATCATGGATGCGCTAATGGACAACACG
GATGACAAGGAAAGTGCCATCGTACATGCTCTGGGTGTCT
TGAGGAGCTTGTCTTTGGAGGATGCTGAGCAGGTCTTTCT
TTCTGGTAAAGATTATCATTACAGTGAAGTAAAATAATTT
AACAGACTGTTGACAAACAACTGACGAAAGAAGAGAGACC
ATTCAATAGTGGATACCCTTCCAGCCGCAACCCAGTACTG
GGAAACGCCCATTTACACTCATACACTTGAACATGGGGAG
AACATGCAAACTCCACACAGAAATAACCACTGGCCCAGCC
GGGGCTTGAATCAGCAACCTTCTTGCTGTGAGGCGACGGT
GCTTACCACTGTGCTGCCCTATGTGCTCTATGCGGGTGAG
TGGGATTGACAAACCACCTGGAGGACACACTCTTGCTGTC
TTAATGCACCAGACATTTTGAAATCATGTGCATTTCATGT
TTAATTGTATAACTGCTATTTTATCTCATAGCACTTCATT
TTTGTCTTGATATTTAATATCTCTTGTTTTAAATACACTA
TGAGCAGAATCTGCACTAATTATTTTCCTTGTTCCCTATT
TCCACCTGGGGATATTTATCCAGAGGCCACTAGAGATCGT
GACCTGTGAAGAGATGATGCCACCATAGAGGACTTCTAGA
TGTATCCATAATCCTGAAACAGACCGTATCATGAGCAGAT
GCAGTGGTGGTCATGGAGGAGTGGAGAGCATGAGACTGAT
TAATGAAAGACCCCAGTGACAGATG

OTTDART00000057249 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000057249|OTTDARG00000029930|ZDB-GENE-131120-130 si:ch211-217n8.3|no_translation CH211-217N8.3-005 LG_ CR848791.15 Danio rerio processed_transcript NOVEL, 865 bp
CTGCACTCTCAGCACCGCATTTTTAGGACCGCATCTTTAG
GACCGCATCTTTAGGACCCTAGTTTTTTGTGATAGCGTCA
ACTGTCGGATTGGATCATGGATGCGCTAATGGACAACACG
GATGACAAGGAAAGTGCCATCGTACATGCTCTGGGTGTCT
TGAGGAGCTTGTCTTTGGAGGATGCTGAGCAGGTCTTTCT
TTCTGGTAAAGATTATCATTACAGTGAAGTAAAATAATTT
AACAGACTGTTGACAAACAACTGACGAAAGAAGAGAGACC
ATTCAATAGTGGATACCCTTCCAGCCGCAACCCAGTACTG
GGAAACGCCCATTTACACTCATACACTTGAACATGGGGAG
AACATGCAAACTCCACACAGAAATAACCACTGGCCCAGCC
GGGGCTTGAATCAGCAACCTTCTTGCTGTGAGGCGACGGT
GCTTACCACTGTGCTGCCCTATGTGCTCTATGCGGGTGAG
TGGGATTGACAAACCACCTGGAGGACACACTCTTGCTGTC
TTAATGCACCAGACATTTTGAAATCATGTGCATTTCATGT
TTAATTGTATAACTGCTATTTTATCTCATAGCACTTCATT
TTTGTCTTGATATTTAATATCTCTTGTTTTAAATACACTA
TGAGCAGAATCTGCACTAATTATTTTCCTTGTTCCCTATT
TCCACCTGGGGATATTTATCCAGAGGCCACTAGAGATCGT
GACCTGTGAAGAGATGATGCCACCATAGAGGACTTCTAGA
TGTATCCATAATCCTGAAACAGACCGTATCATGAGCAGAT
GCAGTGGTGGTCATGGAGGAGTGGAGAGCATGAGACTGAT
TAATGAAAGACCCCAGTGACAGATG

Related Transcripts

Transcripts related to si:ch211-217n8.3

Type	Name	Annotation Method	Length (nt)	Analysis
lincRNA	si:ch211-217n8.3-001 (1) Ensembl	Ensembl	567 nt	Select Tool ZFIN BLAST
lincRNA	si:ch211-217n8.3-003 (1) Ensembl	Ensembl	318 nt	Select Tool ZFIN BLAST
lincRNA	si:ch211-217n8.3-006 (1) Ensembl	Ensembl	653 nt	Select Tool ZFIN BLAST
lincRNA	si:ch211-217n8.3-007 (1) Ensembl	Ensembl	478 nt	Select Tool ZFIN BLAST
ncRNA	si:ch211-217n8.3-002 (1) Ensembl	Ensembl	670 nt	Select Tool ZFIN BLAST
ncRNA	si:ch211-217n8.3-004 (1) Ensembl	Ensembl	847 nt	Select Tool ZFIN BLAST
ncRNA	si:ch211-217n8.3-005	Ensembl	865 nt

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations