Transcript

sec22ba-203

ID

ZDB-TSCRIPT-130528-760

Name

sec22ba-203 Nomenclature History

Previous Names

sec22ba-003

Transcript Type

aberrant processed transcript

Annotation Status

nonsense mediated decay

Annotation Method

Ensembl

Associated With Genes

sec22ba (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000153323 (1) [ Show ] (double-click sequence to select)

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>tpe|ENSDART00000153323.2|gene_biotype:protein_coding|ENSDARG00000030108.9 transcript_biotype:nonsense_mediated_decay gene_symbol:sec22ba cdna chromosome:GRCz11:2:9973881:9982953:1
GCAGACGATGATTGTTCGGGTCGCTGACAGTCTTCCGCTT
GCTGCGTCAATGCAAGAAGACGAGCAGCTATGTCATTGAG
AAAGGAGTGTGTTACTTGGCCTTGTGTGAAGCTGGGTTTC
CCAAGAAACTGGCGTTTGCCTATCTGGAGGATCTGGAAGG
AGAATTCAGCGAGCAGTACGGGGCAAAGGTCCCATCTGTA
TCACGGCCATACTCTTTTATCGAATTTGACACGTACATAC
AGAAAACTAAAAAGTCGTACATAGACAGCAGAGCAAGAAG
AAATCTGGGCAACATCAATTCAGAATTACACGATGTACAG
AGGATCATGGTTGCTAACATAGAGGAAGTGCTTCAGCGGG
GAGAAGCATTATCTGCCTTGGATTCCAAAGCAAGTAATCT
GTCCAGTCTGTCTAAGAAGTACCGCAGTGATGCCAAATAT
CTGAACACCCGGTCTACCTACGCTAAAGTGGCTGCCGGCG
CAGTCATTATCATCACACTCATCATTTACGTGCGCTTCTG
GTGGCTGTGAAATACACGGAACAAATTCAAGCAGAAACTC
TCAGGGCCTTGCTCACAAAAAAAAAAATGGTTCGGACACC
AAATAGTCTGTTCTGGCCTTAAAGTTGTGTCTGTTTTGAC
ATACTGAATGCAGGT

OTTDART00000059000 (1) [ Show ] (double-click sequence to select)

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>tpe|OTTDART00000059000|OTTDARG00000019597|ZDB-GENE-010724-3 sec22ba|OTTDARP00000046078 sec22ba-003 LG_ CR956623.8 Danio rerio protein_coding KNOWN, 655 bp
GCAGACGATGATTGTTCGGGTCGCTGACAGTCTTCCGCTT
GCTGCGTCAATGCAAGAAGACGAGCAGCTATGTCATTGAG
AAAGGAGTGTGTTACTTGGCCTTGTGTGAAGCTGGGTTTC
CCAAGAAACTGGCGTTTGCCTATCTGGAGGATCTGGAAGG
AGAATTCAGCGAGCAGTACGGGGCAAAGGTCCCATCTGTA
TCACGGCCATACTCTTTTATCGAATTTGACACGTACATAC
AGAAAACTAAAAAGTCGTACATAGACAGCAGAGCAAGAAG
AAATCTGGGCAACATCAATTCAGAATTACACGATGTACAG
AGGATCATGGTTGCTAACATAGAGGAAGTGCTTCAGCGGG
GAGAAGCATTATCTGCCTTGGATTCCAAAGCAAGTAATCT
GTCCAGTCTGTCTAAGAAGTACCGCAGTGATGCCAAATAT
CTGAACACCCGGTCTACCTACGCTAAAGTGGCTGCCGGCG
CAGTCATTATCATCACACTCATCATTTACGTGCGCTTCTG
GTGGCTGTGAAATACACGGAACAAATTCAAGCAGAAACTC
TCAGGGCCTTGCTCACAAAAAAAAAAATGGTTCGGACACC
AAATAGTCTGTTCTGGCCTTAAAGTTGTGTCTGTTTTGAC
ATACTGAATGCAGGT

Related Transcripts

Transcripts related to sec22ba

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	sec22ba-203	Ensembl	655 nt
mRNA	sec22ba-201 (1) Ensembl	Ensembl	1,667 nt	Select Tool
mRNA	sec22ba-202 (1) Ensembl	Ensembl	924 nt	Select Tool

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations