Transcript

tube1-201

ID
ZDB-TSCRIPT-121213-852
Name
tube1-201 Nomenclature History
Previous Names
  • dkey-119m7.7-001
  • ottdart00000057957
Transcript Type
aberrant processed transcript
Annotation Status
nonsense mediated decay
Annotation Method
Ensembl
Associated With Genes
Strain
TU
Non Reference Strain
Genome Resources
RNA Central
None
Note
None
Sequence
ENSDART00000152698 (1) [ Show ] (double-click sequence to select) [Download]
>tpe|ENSDART00000152698.2|gene_biotype:protein_coding|ENSDARG00000043982.9 transcript_biotype:nonsense_mediated_decay gene_symbol:tube1 cdna chromosome:GRCz11:20:262995:318105:1
ATAGCAAACAGCAACGACAACATTGGCAAAATAGCGACAA
CTCAACCGTACAAATGGACGGTGTTTAGAAGCTCTTGTGA
GGATGCCAGACGCCGCTTAGAACCAAGACGAGGAAAAAGA
CACTGCTGAGATGGCGATGTAACTTAACCAATGTCAGTTG
AACTAAAATGGTGTAAACCACTGATCTCCGACTTGTCTGT
TATACATGAGTGTGTAAAATAAAGAGATGACGCAGTCTGT
CGTAGTCCAAGTTGGTCAGTGTGGGAATCAGGTGGGCTGC
CGCTTCTGGGATCTCGCACTCAGAGAACATGCACACGTGA
ATCAAATGGGAGTTTATGATGACGCGCTGAGCAGCTTCTT
TAGGAACGTTGACCAGAGGAGAGGGTACGGAGCAGAGGCA
ACCGGCGGCAAGATCACAGGTCTGAAGGCCAGGGCCGTGT
TAGTGGATATGGAGGAGGGAGTGCTTGGAGGGATTCTGCA
GGGGCCGTTGCGTTCTCTCTTCAGCAGCGCACAGCTCATA
AGCGATGTCTCTGGTTCAGGGAATAACTGGGCAGTCGGGC
ACCACACATATGGTTTGGCCTACAGAGAGCAGATCGTGGA
TCAGGTTCGCAAGGCTGCAGAACACTGTGACTGCCTTCAG
TGCTTCTTCCTTATTCACTCCATGGGGGGAGGAACTGGTT
CAGGGTTAGGCACGTTTGTGTTGAAGCTTCTAGAAGAGGA
GTTCCCAGAGGTGTATCGGATCGTGACCTCCGTTTACCCC
ACTGCAGAAGATGATGTCATCACTTCTCCTTACAACAGCG
TCCTAGCCATGAAAGAACTCACAGAACATGCAGACTGCGT
CCTGCCGGTCGACAACCAGTCTCTGGTTGATATTGTCGGT
AAGATAAAACACATGTCCAACACTGGCAAACCAGGCTGTG
CTATCAAGAAGGACAGTACCATCATCTCTGGACAAGGAGG
GGTGGTGAAGGTGGAGAAGCCCTTTGATGCCATGAACAAC
ATTGTGGCCAATCTGCTTCTTAATATTACCAGTTCAGCGC
GGTTTGAGGGCTCTCTCAACATGGATCTGAATGAGATAGC
CATGAACCTGGTCCCTTTCCCACGTTTACACTACCTTGTG
TCCAGCCTGACTCCTCTCTACACACTGGCTGATGTCAGTG
TGCCACCCCGCAGGCTGGATCAGATGTTCTCGGATGCGTT
CAGTAAGGAGCATCAGCTGATCAGAGCCGACCCCAAACAC
AACCTGTATCTGGCCTGTGCACTCATGCTGCGTGGAAACG
TTCAGCTGTCGGACCTGCGGCGGAACATTGAGAGGCTGAG
GCCCACCCTGCCGTTTGTCCCATGGAATCAGGAAGGATGG
AAGACCAGCCTGTGTTCTGTCCTGCCTGTGGGTCACTCAC
ATTCTCTGCTGGCCTTAGCCAACAACACTTGTGTGAAGTC
CACCTTTTCTGAACTGAGGGAACGCTTTATGAAGCTCTAC
CGTAGGAAGGCTCATTTGCATCATTATCTAGCCGTTGATG
GCATGGAGCAGTCTGGATTCACTGAAGCGCTGTCATCAAT
CTCAACACTTATTGAAGACTACACACACCTGGAATGCCCT
CTCATGCCAAACGCCCCCAGACTCACCATGGCCACCTGAC
CTGTTGGGATCTCGTGTGTGAAAACGCCACTATGAACAAC
ATTGGCTCTTCTATCTATATGTTTGGGCTGCTGGTTGGAG
CGGTGCTGTTCGGAGCCCTTGCTGATAAGTATGGCCGCAG
AATAATCATACTGATCGGTTTAGCAATACAGGCCATCTTC
GGAGTGGGCGCCGCTTTTGCCCCAAATTTCTACATTTACG
TCCTGCTACGCTTCGTGGTGGGCACGACTGTGTCGGCAGT
GATCATGAATGCATTTGTGCTGGGCACTGAGTGGACGGGT
CCTAAAAAGCGCATGTTGGCAGGTGTCATCACAGATTACT
TTTTTGGGTTCGGCTATATCCTGCTTGCAGGGGTGGCCTA
CCTCATCCGAGACTGGCGTAAACTTCAGTTGGCCATTTCT
GCCCCCAGCTTCCTCTTCCTGTTCTATGTCTGGGTGCTTC
CCAAGTCTGCCCGCTGGTTAATGGCCAATAACAAGCATGA
GGAGGCATTGGATCTGATTCGCAAGGCAGCGCTTATTAAT
GGCAAGCCTCTGGAGGACGATGACATGGAGCTCTATCAGA
GTCCTAAAAGCTCAGAAAAACTTCAGGAGCAGAGGAAGTA
CACAGTCTTGGATCTGGTCCGAACGCCTAGAATGAGGAAA
CAGTCCCTCATCCTCTTCTACCTGTGGTTTGTGAACGTCC
TGGTCTATTATGGGCTGTCGCTCAACATTTCAGACTTTGG
TATGAATATCTACCTGACGCAGATGATC

OTTDART00000057957 (1) [ Show ] (double-click sequence to select) [Download]
>tpe|OTTDART00000057957|OTTDARG00000040395|ZDB-GENE-040426-1174 tube1|OTTDARP00000045388 DKEY-119M7.7-001 LG_ AL954744.8 Danio rerio protein_coding NOVEL, 2388 bp
ATAGCAAACAGCAACGACAACATTGGCAAAATAGCGACAA
CTCAACCGTACAAATGGACGGTGTTTAGAAGCTCTTGTGA
GGATGCCAGACGCCGCTTAGAACCAAGACGAGGAAAAAGA
CACTGCTGAGATGGCGATGTAACTTAACCAATGTCAGTTG
AACTAAAATGGTGTAAACCACTGATCTCCGACTTGTCTGT
TATACATGAGTGTGTAAAATAAAGAGATGACGCAGTCTGT
CGTAGTCCAAGTTGGTCAGTGTGGGAATCAGGTGGGCTGC
CGCTTCTGGGATCTCGCACTCAGAGAACATGCACACGTGA
ATCAAATGGGAGTTTATGATGACGCGCTGAGCAGCTTCTT
TAGGAACGTTGACCAGAGGAGAGGGTACGGAGCAGAGGCA
ACCGGCGGCAAGATCACAGGTCTGAAGGCCAGGGCCGTGT
TAGTGGATATGGAGGAGGGAGTGCTTGGAGGGATTCTGCA
GGGGCCGTTGCGTTCTCTCTTCAGCAGCGCACAGCTCATA
AGCGATGTCTCTGGTTCAGGGAATAACTGGGCAGTCGGGC
ACCACACATATGGTTTGGCCTACAGAGAGCAGATCGTGGA
TCAGGTTCGCAAGGCTGCAGAACACTGTGACTGCCTTCAG
TGCTTCTTCCTTATTCACTCCATGGGGGGAGGAACTGGTT
CAGGGTTAGGCACGTTTGTGTTGAAGCTTCTAGAAGAGGA
GTTCCCAGAGGTGTATCGGATCGTGACCTCCGTTTACCCC
ACTGCAGAAGATGATGTCATCACTTCTCCTTACAACAGCG
TCCTAGCCATGAAAGAACTCACAGAACATGCAGACTGCGT
CCTGCCGGTCGACAACCAGTCTCTGGTTGATATTGTCGGT
AAGATAAAACACATGTCCAACACTGGCAAACCAGGCTGTG
CTATCAAGAAGGACAGTACCATCATCTCTGGACAAGGAGG
GGTGGTGAAGGTGGAGAAGCCCTTTGATGCCATGAACAAC
ATTGTGGCCAATCTGCTTCTTAATATTACCAGTTCAGCGC
GGTTTGAGGGCTCTCTCAACATGGATCTGAATGAGATAGC
CATGAACCTGGTCCCTTTCCCACGTTTACACTACCTTGTG
TCCAGCCTGACTCCTCTCTACACACTGGCTGATGTCAGTG
TGCCACCCCGCAGGCTGGATCAGATGTTCTCGGATGCGTT
CAGTAAGGAGCATCAGCTGATCAGAGCCGACCCCAAACAC
AACCTGTATCTGGCCTGTGCACTCATGCTGCGTGGAAACG
TTCAGCTGTCGGACCTGCGGCGGAACATTGAGAGGCTGAG
GCCCACCCTGCCGTTTGTCCCATGGAATCAGGAAGGATGG
AAGACCAGCCTGTGTTCTGTCCTGCCTGTGGGTCACTCAC
ATTCTCTGCTGGCCTTAGCCAACAACACTTGTGTGAAGTC
CACCTTTTCTGAACTGAGGGAACGCTTTATGAAGCTCTAC
CGTAGGAAGGCTCATTTGCATCATTATCTAGCCGTTGATG
GCATGGAGCAGTCTGGATTCACTGAAGCGCTGTCATCAAT
CTCAACACTTATTGAAGACTACACACACCTGGAATGCCCT
CTCATGCCAAACGCCCCCAGACTCACCATGGCCACCTGAC
CTGTTGGGATCTCGTGTGTGAAAACGCCACTATGAACAAC
ATTGGCTCTTCTATCTATATGTTTGGGCTGCTGGTTGGAG
CGGTGCTGTTCGGAGCCCTTGCTGATAAGTATGGCCGCAG
AATAATCATACTGATCGGTTTAGCAATACAGGCCATCTTC
GGAGTGGGCGCCGCTTTTGCCCCAAATTTCTACATTTACG
TCCTGCTACGCTTCGTGGTGGGCACGACTGTGTCGGCAGT
GATCATGAATGCATTTGTGCTGGGCACTGAGTGGACGGGT
CCTAAAAAGCGCATGTTGGCAGGTGTCATCACAGATTACT
TTTTTGGGTTCGGCTATATCCTGCTTGCAGGGGTGGCCTA
CCTCATCCGAGACTGGCGTAAACTTCAGTTGGCCATTTCT
GCCCCCAGCTTCCTCTTCCTGTTCTATGTCTGGGTGCTTC
CCAAGTCTGCCCGCTGGTTAATGGCCAATAACAAGCATGA
GGAGGCATTGGATCTGATTCGCAAGGCAGCGCTTATTAAT
GGCAAGCCTCTGGAGGACGATGACATGGAGCTCTATCAGA
GTCCTAAAAGCTCAGAAAAACTTCAGGAGCAGAGGAAGTA
CACAGTCTTGGATCTGGTCCGAACGCCTAGAATGAGGAAA
CAGTCCCTCATCCTCTTCTACCTGTGGTTTGTGAACGTCC
TGGTCTATTATGGGCTGTCGCTCAACATTTCAGACTTTGG
TATGAATATCTACCTGACGCAGATGATC

Segment Relationships
Protein Products
No data available
Supporting Sequences
Citations