Transcript

si:ch211-15j21.2-005

ID

ZDB-TSCRIPT-121213-830

Name

si:ch211-15j21.2-005 Nomenclature History

Previous Names

ch211-15j21.2-005

Transcript Type

ncRNA

Annotation Status

retained intron

Annotation Method

Ensembl

Associated With Genes

si:ch211-15j21.2 (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000152619 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|ENSDART00000152619.2|gene_biotype:processed_transcript|ENSDARG00000093338.4 transcript_biotype:retained_intron  ncrna chromosome:GRCz11:15:38949881:38952053:-1
ACTTAATTACGAACACCTGACCTGCAGTGCAGCAGAATTC
CGAGGTAAGCGTATTTTTAGATGCTTTAACGTTTTATTTA
CCCCCCGATTTTGTCAGTGTATCTTAAACGTGACTTTTGA
GGTGTAGTGTTTCGAATTTTGAAGCATTTAAAACTTTCCA
GTTTGTTTTTAGTCTTGTTTGCGCTCCGGTGACGCGCAGC
TAACCTCGAGGTAATGTCACATGTTTAACGTTAGTCTAAA
TGAGCGTTTTTATGGCAAATTCAAAGCGATAAACTCCAAA
CGCAGTTTAAAGTTACTGAGCAACGTTATAAAACAATATC
CATTTTAAACGCTGTATTATTAGTGTTATTATTACAAAGT
TAACTGCTGTCGTTTCACTGTTGTTGTTGTTTTTGCTTTT
AGACATGTAACTTACTCCAGAGACGCACTAACTTGCACAG
CATTGAATGGAAAAGGCTTTGTCCATGTCCAGTTGAGGGC
ATCAAGAACACGCAGATGGCCTAAACCTGTGTCAGCCTGG
ACAGACTGCAGTTCTGCTACTCCACGCCAAGGCTTTTGTA
TGGATGTCTTGACTACTACTGTGTTCTCTAAAGGTTTTCT
GGAAGCTCCATTTGAGGGCATCAAGGACATACTGATGGCC
TAAACCAGTGTCAGCCTAGACAGACAGACATCTATTGCAG
TTCTGCTACACAAGACCAAACTCTCTGCTTTTGTATGGAT
GTCTGACTAGTATGGTGTTCTCTAAAGGTGTAACTGGAGC
AAAACAACAGCACCCGTTACAGTGAAATTTGTGTTCATAA
AAGATAGTGATATATCAGGTATAGTAACAGGTCCAGTACA
TTTGTCATAAAGGTTAAATCACAGTAAGTACTGTAAAAAT
AACTTGTTTGCCTTTGCCACAACAGGTCATGGTGTGTGCA
TACTACTCGTAGTAAACAC

OTTDART00000057803 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000057803|OTTDARG00000009431|ZDB-GENE-060531-20 si:ch211-15j21.2|no_translation CH211-15J21.2-005 LG_ BX088709.6 Danio rerio processed_transcript NOVEL, 939 bp
ACTTAATTACGAACACCTGACCTGCAGTGCAGCAGAATTC
CGAGGTAAGCGTATTTTTAGATGCTTTAACGTTTTATTTA
CCCCCCGATTTTGTCAGTGTATCTTAAACGTGACTTTTGA
GGTGTAGTGTTTCGAATTTTGAAGCATTTAAAACTTTCCA
GTTTGTTTTTAGTCTTGTTTGCGCTCCGGTGACGCGCAGC
TAACCTCGAGGTAATGTCACATGTTTAACGTTAGTCTAAA
TGAGCGTTTTTATGGCAAATTCAAAGCGATAAACTCCAAA
CGCAGTTTAAAGTTACTGAGCAACGTTATAAAACAATATC
CATTTTAAACGCTGTATTATTAGTGTTATTATTACAAAGT
TAACTGCTGTCGTTTCACTGTTGTTGTTGTTTTTGCTTTT
AGACATGTAACTTACTCCAGAGACGCACTAACTTGCACAG
CATTGAATGGAAAAGGCTTTGTCCATGTCCAGTTGAGGGC
ATCAAGAACACGCAGATGGCCTAAACCTGTGTCAGCCTGG
ACAGACTGCAGTTCTGCTACTCCACGCCAAGGCTTTTGTA
TGGATGTCTTGACTACTACTGTGTTCTCTAAAGGTTTTCT
GGAAGCTCCATTTGAGGGCATCAAGGACATACTGATGGCC
TAAACCAGTGTCAGCCTAGACAGACAGACATCTATTGCAG
TTCTGCTACACAAGACCAAACTCTCTGCTTTTGTATGGAT
GTCTGACTAGTATGGTGTTCTCTAAAGGTGTAACTGGAGC
AAAACAACAGCACCCGTTACAGTGAAATTTGTGTTCATAA
AAGATAGTGATATATCAGGTATAGTAACAGGTCCAGTACA
TTTGTCATAAAGGTTAAATCACAGTAAGTACTGTAAAAAT
AACTTGTTTGCCTTTGCCACAACAGGTCATGGTGTGTGCA
TACTACTCGTAGTAAACAC

Related Transcripts

Transcripts related to si:ch211-15j21.2

Type	Name	Annotation Method	Length (nt)	Analysis
lincRNA	si:ch211-15j21.2-001 (1) Ensembl	Ensembl	2,415 nt	Select Tool ZFIN BLAST
lincRNA	si:ch211-15j21.2-002 (1) Ensembl	Ensembl	1,161 nt	Select Tool ZFIN BLAST
lincRNA	si:ch211-15j21.2-003 (1) Ensembl	Ensembl	875 nt	Select Tool ZFIN BLAST
lincRNA	si:ch211-15j21.2-004 (1) Ensembl	Ensembl	408 nt	Select Tool ZFIN BLAST
lincRNA	si:ch211-15j21.2-006 (1) Ensembl	Ensembl	612 nt	Select Tool ZFIN BLAST
lincRNA	si:ch211-15j21.2-007 (1) Ensembl	Ensembl	940 nt	Select Tool ZFIN BLAST
ncRNA	si:ch211-15j21.2-005	Ensembl	939 nt
ncRNA	si:ch211-15j21.2-008 (1) Ensembl	Ensembl	795 nt	Select Tool ZFIN BLAST

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations