Transcript

si:ch211-22i13.2-201

ID

ZDB-TSCRIPT-121213-576

Name

si:ch211-22i13.2-201 Nomenclature History

Previous Names

ch211-22i13.2-002
si:ch211-22i13.2-002

Transcript Type

aberrant processed transcript

Annotation Status

nonsense mediated decay

Annotation Method

Ensembl

Associated With Genes

si:ch211-22i13.2 (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000063839 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|ENSDART00000063839.6|gene_biotype:protein_coding|ENSDARG00000043485.6 transcript_biotype:nonsense_mediated_decay gene_symbol:si:ch211-22i13.2 cdna chromosome:GRCz11:20:14003474:14012826:-1
GCCGCGCAGTGGTGTTTATGTTATTGATACGCATGAACCG
ATCATAGAAATGAAAAACAAGCGTTTATTTTCACCGCAGT
TTATTTTCAGAAAGGAATATATTCAGATCAGTTTATCAGG
CTGATTTTTGTGTTTTTGTAGTGGTCGGAAGGATACGACA
CATCATAAACATGGTAGAGAAAACCGCAAACGGGCAAGAA
GCAGAAGCAGATCTTCCTCCTCATCATCCAGTTCTTCGTC
TTCCTCCTCCTCTTCTTCCTCTTCCTCCTCTTCTTCTTCA
CGATCGTCATCTAGCAGTTCTTCATCACACAGTATCTCCA
GCTCCAGTGGCTCAGATTCTTGCAAAAAGCGAGGGAAATC
TTCAAAGAAAAGTAAAGAGAAACACGGCAAAAAGAAAAGA
ACAAAAGAGAAGACACGCAAGAAGAAAAAGGAAAAGGGCC
ACAAAGGGCAGGACGAGAGCTCTGGACCTGTTCAAATTTC
AAAGTATCTTAAGGAAAAGAAGAAAAGTGGCAAGTACAGC
ATGATTTCAGGAAAAAAGATTAAAATGAAAGTAAAAAAGT
CAAAGAAGGACAAGCAGAGGGATAAGAACAGAGCGGAGCT
GCTGGATTTCTTAAACTCCACCTACTGATTCAGTCCAGAC
CCAGAACCATTGTTATTATTTTGTTTGTTTGCATTATTCA
CCTGACAGTCACTCAGGGAAAGACCATCTTGAAACAATAA
TATTGTTGCCTGAAATTATACATGGACAGATCCTCAACAT
TAATCATTTATGTTGACAACAGTTGCTTTTATTTTAGTTT
TTTATTATTATTCCAGACTATATAAACTGAAACATTTGTA
TTTTTACATCTTAATTGTACC

OTTDART00000058068 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000058068|OTTDARG00000007043|ZDB-GENE-041014-143 si:ch211-22i13.2|OTTDARP00000045471 CH211-22I13.2-002 LG_ CR388404.5 Danio rerio protein_coding NOVEL, 861 bp
GCCGCGCAGTGGTGTTTATGTTATTGATACGCATGAACCG
ATCATAGAAATGAAAAACAAGCGTTTATTTTCACCGCAGT
TTATTTTCAGAAAGGAATATATTCAGATCAGTTTATCAGG
CTGATTTTTGTGTTTTTGTAGTGGTCGGAAGGATACGACA
CATCATAAACATGGTAGAGAAAACCGCAAACGGGCAAGAA
GCAGAAGCAGATCTTCCTCCTCATCATCCAGTTCTTCGTC
TTCCTCCTCCTCTTCTTCCTCTTCCTCCTCTTCTTCTTCA
CGATCGTCATCTAGCAGTTCTTCATCACACAGTATCTCCA
GCTCCAGTGGCTCAGATTCTTGCAAAAAGCGAGGGAAATC
TTCAAAGAAAAGTAAAGAGAAACACGGCAAAAAGAAAAGA
ACAAAAGAGAAGACACGCAAGAAGAAAAAGGAAAAGGGCC
ACAAAGGGCAGGACGAGAGCTCTGGACCTGTTCAAATTTC
AAAGTATCTTAAGGAAAAGAAGAAAAGTGGCAAGTACAGC
ATGATTTCAGGAAAAAAGATTAAAATGAAAGTAAAAAAGT
CAAAGAAGGACAAGCAGAGGGATAAGAACAGAGCGGAGCT
GCTGGATTTCTTAAACTCCACCTACTGATTCAGTCCAGAC
CCAGAACCATTGTTATTATTTTGTTTGTTTGCATTATTCA
CCTGACAGTCACTCAGGGAAAGACCATCTTGAAACAATAA
TATTGTTGCCTGAAATTATACATGGACAGATCCTCAACAT
TAATCATTTATGTTGACAACAGTTGCTTTTATTTTAGTTT
TTTATTATTATTCCAGACTATATAAACTGAAACATTTGTA
TTTTTACATCTTAATTGTACC

Related Transcripts

Transcripts related to si:ch211-22i13.2

Type	Name	Annotation Method	Has Havana Data	Length (nt)	Analysis
aberrant processed transcript	si:ch211-22i13.2-201	Ensembl		861 nt
mRNA	si:ch211-22i13.2-202 (1) Ensembl	Ensembl		1,378 nt	Select Tool

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations