Transcript

tmem39a-005

ID

ZDB-TSCRIPT-121213-353

Name

tmem39a-005 Nomenclature History

Previous Names

zfos-1597f10.6-005

Transcript Type

ncRNA

Annotation Status

retained intron

Annotation Method

Ensembl

Associated With Genes

tmem39a (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000169744 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|ENSDART00000169744.1|gene_biotype:protein_coding|ENSDARG00000102746.2 transcript_biotype:retained_intron cdna chromosome:GRCz11:1:42839:44546:-1
GTCGGTTTGCCACGTCGGTCTGTAACTGCGGCGCGAGGAA
CTTCAGCAACTTTGTGTTTTGCGTTCTGAGGCCGTAAACA
ACAAACAAACAACCGAGTAAACAAACAACGAGCTCCGGCG
CAGACCCGCGGGCAGAGTGAGGAGCTCCGCCGCGCAGCAG
ATGCAGAGAGCGGCGTGTGGAGGAGCTGATGCCCGCTGAT
GCTGCTCCATGATCGTGTCCGCGGCGTGAGGTCGAGGGCT
CCGAGATGCCCGGGGGCCGCAGGGGCCCCAGTAGACAGCA
GCTGAGCCGCTCCGCGCTGCCGTCGCTGCAGACACTGGTG
GGCGGCGGCCTGAGCAATGGGGCGGGGCTTCGATGCAGGT
GAGCATCACTTAAGCCGCCTTTCCACTGCACACGACATCT
GGACTCGACTGTCAGAACTCGCCCGCTTGTGGCGGTCGCT
CAGTATTTCAGTGCTGCCGTGCTGCATGGCAGAGGAGCTG
ATCTCACCGTCACCCAGTGCTGGAGCAGGAGCGTCACTCT
CCCCGAGCCCAGCACGGCGCAATGAACACACACACACACA
CACACACACACACACACACACAGACCTGCTTAGACAACAC
TGAGTACATCACATCCGGCCAGTCACAGCGGTCCAAACTC
TTCAACAGATCCGCAGCTCAAACCAGATCAGAACACCACA
CAGCTCCCGGACCGCTCTCCACTCATAATGAAGAACTTCC
GGCCTGACACATGTCGTGTGCAGTGAAAACAAGGCCTCTG
TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
AGTGACA

OTTDART00000047299 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000047299|OTTDARG00000032471|ZDB-GENE-030131-1928 tmem39a|no_translation ZFOS-1597F10.6-005 LG_none CU651657.10,FP475876.7 Danio rerio protein_coding KNOWN, 807 bp
GTCGGTTTGCCACGTCGGTCTGTAACTGCGGCGCGAGGAA
CTTCAGCAACTTTGTGTTTTGCGTTCTGAGGCCGTAAACA
ACAAACAAACAACCGAGTAAACAAACAACGAGCTCCGGCG
CAGACCCGCGGGCAGAGTGAGGAGCTCCGCCGCGCAGCAG
ATGCAGAGAGCGGCGTGTGGAGGAGCTGATGCCCGCTGAT
GCTGCTCCATGATCGTGTCCGCGGCGTGAGGTCGAGGGCT
CCGAGATGCCCGGGGGCCGCAGGGGCCCCAGTAGACAGCA
GCTGAGCCGCTCCGCGCTGCCGTCGCTGCAGACACTGGTG
GGCGGCGGCCTGAGCAATGGGGCGGGGCTTCGATGCAGGT
GAGCATCACTTAAGCCGCCTTTCCACTGCACACGACATCT
GGACTCGACTGTCAGAACTCGCCCGCTTGTGGCGGTCGCT
CAGTATTTCAGTGCTGCCGTGCTGCATGGCAGAGGAGCTG
ATCTCACCGTCACCCAGTGCTGGAGCAGGAGCGTCACTCT
CCCCGAGCCCAGCACGGCGCAATGAACACACACACACACA
CACACACACACACACACACACAGACCTGCTTAGACAACAC
TGAGTACATCACATCCGGCCAGTCACAGCGGTCCAAACTC
TTCAACAGATCCGCAGCTCAAACCAGATCAGAACACCACA
CAGCTCCCGGACCGCTCTCCACTCATAATGAAGAACTTCC
GGCCTGACACATGTCGTGTGCAGTGAAAACAAGGCCTCTG
TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
AGTGACA

Related Transcripts

Transcripts related to tmem39a

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	tmem39a-203 (1) Ensembl	Ensembl	411 nt	Select Tool ZFIN BLAST
mRNA	tmem39a-201 (1) Ensembl	Ensembl	521 nt	Select Tool ZFIN BLAST
mRNA	tmem39a-202 (1) Ensembl	Ensembl	905 nt	Select Tool ZFIN BLAST
mRNA	tmem39a-204 (1) Ensembl	Ensembl	2,207 nt	Select Tool ZFIN BLAST
mRNA	tmem39a-205 (1) Ensembl	Ensembl	196 nt	Select Tool ZFIN BLAST
mRNA	tmem39a-208 (1) Ensembl	Ensembl	1,472 nt	Select Tool ZFIN BLAST
ncRNA	tmem39a-004 (1) Ensembl	Ensembl	493 nt	Select Tool ZFIN BLAST
ncRNA	tmem39a-005	Ensembl	807 nt

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations