Transcript

jade1-004

ID

ZDB-TSCRIPT-120702-52

Name

jade1-004 Nomenclature History

Previous Names

phf17-004

Transcript Type

ncRNA

Annotation Status

retained intron

Annotation Method

Ensembl

Associated With Genes

jade1 (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000151869 (1) [ Show ] (double-click sequence to select)

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>tpe|ENSDART00000151869.2|gene_biotype:protein_coding|ENSDARG00000033707.7 transcript_biotype:retained_intron cdna chromosome:GRCz11:17:26843890:26845949:1
GTCTTTTTTTACTCAGTATCGTTGGTTAGTCAGTGAATGA
TGTAAGTGTTATTAGTAACATTTAAATTTCTTTCCCTGTT
TCATTCTGTCGTGCCACAGTCATTATCACATCAGTGTTTT
GCCATTGGACCATTAAATTTGTTGTTAGGCCAAAACCTAA
AACACACACCTGTACAAATGTATGATACACAAATGTTTAA
TTTACTGATCTAAATTACTTGTGTGAAGCACACACATTTA
CTCGCCATCATGTTGATCCAAACCCTTCCACTACAAACAC
AAAAGATCCTTTATTCTTCTCATTCTCAAATCATTGTTTT
TTCATTGAATGTAAGTCTGTGCATGTTTGACACATTAGAA
TCCTCTAAAATACATAACAAAAGGAATCTATTTGAAGCAA
GTGATTAATTTAGATTGTTGTTTGTATGTAGAAAAGAGTT
AGAAAATCAACTTATTTACCTTGCTTGATTTGCAAGAACA
TCTCATTGGTTCTCACATGCCAAACAGAATGATATATTAA
CTATTATATATAATGCTTTTTTAAAGCTTCTTTGTAGATT
ATTGTATGTCTCATCCACATATATGTGTGTTCAGGTGCGT
AATTTGACGTATATGGTCAGCCGACGGGAGAGGATTAAAC
GGACCTTGTGCCGAGTGCAGGAGCAGATCTTTCATCACCA
CGTCAGGCTGCTGGAGCAGGGCCGCGTCACTGGTATATCC
TCTACTAGACGTTTGG

OTTDART00000055619 (1) [ Show ] (double-click sequence to select)

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>tpe|OTTDART00000055619|OTTDARG00000020382|ZDB-GENE-030131-5648 jade1|no_translation phf17-004 LG_ AL928908.16 Danio rerio protein_coding KNOWN, 736 bp
GTCTTTTTTTACTCAGTATCGTTGGTTAGTCAGTGAATGA
TGTAAGTGTTATTAGTAACATTTAAATTTCTTTCCCTGTT
TCATTCTGTCGTGCCACAGTCATTATCACATCAGTGTTTT
GCCATTGGACCATTAAATTTGTTGTTAGGCCAAAACCTAA
AACACACACCTGTACAAATGTATGATACACAAATGTTTAA
TTTACTGATCTAAATTACTTGTGTGAAGCACACACATTTA
CTCGCCATCATGTTGATCCAAACCCTTCCACTACAAACAC
AAAAGATCCTTTATTCTTCTCATTCTCAAATCATTGTTTT
TTCATTGAATGTAAGTCTGTGCATGTTTGACACATTAGAA
TCCTCTAAAATACATAACAAAAGGAATCTATTTGAAGCAA
GTGATTAATTTAGATTGTTGTTTGTATGTAGAAAAGAGTT
AGAAAATCAACTTATTTACCTTGCTTGATTTGCAAGAACA
TCTCATTGGTTCTCACATGCCAAACAGAATGATATATTAA
CTATTATATATAATGCTTTTTTAAAGCTTCTTTGTAGATT
ATTGTATGTCTCATCCACATATATGTGTGTTCAGGTGCGT
AATTTGACGTATATGGTCAGCCGACGGGAGAGGATTAAAC
GGACCTTGTGCCGAGTGCAGGAGCAGATCTTTCATCACCA
CGTCAGGCTGCTGGAGCAGGGCCGCGTCACTGGTATATCC
TCTACTAGACGTTTGG

Related Transcripts

Transcripts related to jade1

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	jade1-201 (1) Ensembl	Ensembl	3,842 nt	Select Tool ZFIN BLAST
mRNA	jade1-205 (1) Ensembl	Ensembl	6,264 nt	Select Tool ZFIN BLAST
ncRNA	jade1-002 (1) Ensembl	Ensembl	539 nt	Select Tool ZFIN BLAST
ncRNA	jade1-003 (1) Ensembl	Ensembl	796 nt	Select Tool ZFIN BLAST
ncRNA	jade1-004	Ensembl	736 nt

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations