Transcript

hivep1-003

ID

ZDB-TSCRIPT-120213-53

Name

hivep1-003 Nomenclature History

Previous Names

dkey-31k9.2-003

Transcript Type

ncRNA

Annotation Status

retained intron

Annotation Method

Ensembl

Associated With Genes

hivep1 (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000166107 (1) [ Show ] (double-click sequence to select)

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>tpe|ENSDART00000166107.2|gene_biotype:protein_coding|ENSDARG00000103658.2 transcript_biotype:retained_intron gene_symbol:hivep1 cdna chromosome:GRCz11:19:3481276:3488449:-1
GGAAAAACAGACCTCTGACCGTTGAAACCCTTGACAACAG
TTCAGACTGCACATATGTGCGGAGATCATCTTTTCTGTGT
GGAATAGGAGATCGGCTTTCCTCGCATTCCAGCCAGCATC
TTTCCTTATGATGTTTCACTGAGCCAGCGGAAAAAAAAAA
CACAAAACACCCAAGAAAATGCCACGTACCAAGCAGAACA
ACCCCAAAAACCTGAAAGGTAAGTGTTGGTTTTTTTATTT
GACTAGTGTTTTAATGCGGTTCTCCTTTTTTGACTTCGAC
GCTGAATGTTGGTGAAAGTGAGGTGTTTGCTTGGTAAATA
GACTAGTACATGGTTCCCAGTCAAACTGGTAGTCATTACG
TGGCTTGGACTGTTTTGGTGTTGATTTTAATCACTCATTT
TGTTTTCCGAAATTAGTCAGTCGTAAAATAGAAATTGAAA
ATCAGAAATGGAGTTTGACTTTCAGTAGTTTCTCTTATAA
TTATAATTTAAAGGAATGCTACGTTACCATTATTAATACA
TTTAGTCGATCTCCAGGTCTAGCGGGATCCATTTTAGCTT
AGATTAGCAAAGTTCCTGTAGTTCCTGGAAAATTAGCCTT
GAAAATAGCAACTTTTCTTTTTCCGTCAGTCTCAGTACAC
AATGTAACTATAAAAGGGTGAATGCTAATGGTCTAATCCG
ATTCAATGATCTATGCTAAGCTAAGCTAAAACTTTAGATT
TCCTTTAAGTGAACACTTCACTTTTATAAAAAATAGGTCC
ACATAGATTTAAACAGTTGAGTTTTAACATTTTTAATCTC
CGGGTTTGACGGAGCAATTTTAACTTACCTTAGCAAAGTT
AATTAACAATTACGCTAGAATGTGAGTGTAGTTTCTAGAA
ATATTGTCCTAGAAAATAGCAGCTTCTCATTTTTTTT

OTTDART00000053028 (1) [ Show ] (double-click sequence to select)

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>tpe|OTTDART00000053028|OTTDARG00000023106|ZDB-GENE-070912-512 hivep1|no_translation DKEY-31K9.2-003 LG_none CT573165.6,CU459027.5,BX890591.12 Danio rerio protein_coding NOVEL, 917 bp
GGAAAAACAGACCTCTGACCGTTGAAACCCTTGACAACAG
TTCAGACTGCACATATGTGCGGAGATCATCTTTTCTGTGT
GGAATAGGAGATCGGCTTTCCTCGCATTCCAGCCAGCATC
TTTCCTTATGATGTTTCACTGAGCCAGCGGAAAAAAAAAA
CACAAAACACCCAAGAAAATGCCACGTACCAAGCAGAACA
ACCCCAAAAACCTGAAAGGTAAGTGTTGGTTTTTTTATTT
GACTAGTGTTTTAATGCGGTTCTCCTTTTTTGACTTCGAC
GCTGAATGTTGGTGAAAGTGAGGTGTTTGCTTGGTAAATA
GACTAGTACATGGTTCCCAGTCAAACTGGTAGTCATTACG
TGGCTTGGACTGTTTTGGTGTTGATTTTAATCACTCATTT
TGTTTTCCGAAATTAGTCAGTCGTAAAATAGAAATTGAAA
ATCAGAAATGGAGTTTGACTTTCAGTAGTTTCTCTTATAA
TTATAATTTAAAGGAATGCTACGTTACCATTATTAATACA
TTTAGTCGATCTCCAGGTCTAGCGGGATCCATTTTAGCTT
AGATTAGCAAAGTTCCTGTAGTTCCTGGAAAATTAGCCTT
GAAAATAGCAACTTTTCTTTTTCCGTCAGTCTCAGTACAC
AATGTAACTATAAAAGGGTGAATGCTAATGGTCTAATCCG
ATTCAATGATCTATGCTAAGCTAAGCTAAAACTTTAGATT
TCCTTTAAGTGAACACTTCACTTTTATAAAAAATAGGTCC
ACATAGATTTAAACAGTTGAGTTTTAACATTTTTAATCTC
CGGGTTTGACGGAGCAATTTTAACTTACCTTAGCAAAGTT
AATTAACAATTACGCTAGAATGTGAGTGTAGTTTCTAGAA
ATATTGTCCTAGAAAATAGCAGCTTCTCATTTTTTTT

Related Transcripts

Transcripts related to hivep1

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	hivep1-203 (1) Ensembl	Ensembl	11,955 nt	Select Tool ZFIN BLAST
mRNA	hivep1-204 (1) Ensembl	Ensembl	10,568 nt	Select Tool ZFIN BLAST
ncRNA	hivep1-002 (1) Ensembl	Ensembl	587 nt	Select Tool ZFIN BLAST
ncRNA	hivep1-003	Ensembl	917 nt

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations