Transcript

atg10-201

ID

ZDB-TSCRIPT-110912-535

Name

atg10-201 Nomenclature History

Previous Names

ottdart00000052107

Transcript Type

aberrant processed transcript

Annotation Status

nonsense mediated decay

Annotation Method

Ensembl

Associated With Genes

atg10 (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000158829 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|ENSDART00000158829.2|gene_biotype:protein_coding|ENSDARG00000104846.3 transcript_biotype:nonsense_mediated_decay cdna chromosome:GRCz11:10:43037133:43073256:1
GAGATCATGATGACCGGTGAGAGAAAGCCTGCATCATGTT
TTCTGGATGAAAAGACCTTCCGGCTTTGCTGTCGGCTTTT
TCTCCAGCACTCGGAGAGCATCCAGGACGGCTGGATCTGG
GAGCAGATCAAGGGCTCTGATGAAGGCTTCATGAAGAAGA
CTGTGCTCATCCCTGTAAAATCTAGCCTTTTGGACAAACA
GCATGAGTCTATACAGGCTGAAAACACTGAACTTCCGACA
GACGACTTTGAGATGGGCGCTCGCTTTCTCTGGAGGAGGT
GTGGAGCAACGTTCATCCAAACTACAGACAGAGGCTGAAG
CAGGAGCCCTGGGACACACTGACACAGCAGGAACATCCAC
TACTTGGCCAGCCGTTTTTCATGCTTCATCCATGTCGCAC
AGAGGAGTTCATGAAACCCGCTCTGGAATTAGCACATGCT
CAAAACAGGAAGGTGAACTATATTGTGAGCTGGCTCAGTG
TTGTGGGTCCTGTCGTCGGCCTGGACGTCCCGTTGAGCTT
CAGCACTGCCGTTTCTGCTCCAGATTAAATTGTCTTTCTG
TCATCCTGATCTGATCTTCAGTTTCCAGAGGACCTGCAGA
GCTAACCTGTGGTGAATCTGCAGAAACGGTTTATCATTAA
CCAGCATCAACCGTCTCTACATGGTTAAACTGGTAAAGAG
TTGTGCAGGAACATTCAGCACATGTGCACAAACCAGCTCA
GACTTTCTTAGTGAAGTGTAAACACATGGACTGTCAGCGT
GTCGTTCATCAGGGATGCTTTCAAATGATCCAAAGTAACA
GTAAAGATGTTTTAATGTTACAAAAGATTACATGTCCTAT
AAATAAATGCTGTTTTTAGGCTGA

OTTDART00000052107 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000052107|OTTDARG00000036557|ZDB-GENE-051030-72 atg10|OTTDARP00000040950 atg10-002 LG_none CU326366.20,CR545479.13 Danio rerio protein_coding KNOWN, 864 bp
GAGATCATGATGACCGGTGAGAGAAAGCCTGCATCATGTT
TTCTGGATGAAAAGACCTTCCGGCTTTGCTGTCGGCTTTT
TCTCCAGCACTCGGAGAGCATCCAGGACGGCTGGATCTGG
GAGCAGATCAAGGGCTCTGATGAAGGCTTCATGAAGAAGA
CTGTGCTCATCCCTGTAAAATCTAGCCTTTTGGACAAACA
GCATGAGTCTATACAGGCTGAAAACACTGAACTTCCGACA
GACGACTTTGAGATGGGCGCTCGCTTTCTCTGGAGGAGGT
GTGGAGCAACGTTCATCCAAACTACAGACAGAGGCTGAAG
CAGGAGCCCTGGGACACACTGACACAGCAGGAACATCCAC
TACTTGGCCAGCCGTTTTTCATGCTTCATCCATGTCGCAC
AGAGGAGTTCATGAAACCCGCTCTGGAATTAGCACATGCT
CAAAACAGGAAGGTGAACTATATTGTGAGCTGGCTCAGTG
TTGTGGGTCCTGTCGTCGGCCTGGACGTCCCGTTGAGCTT
CAGCACTGCCGTTTCTGCTCCAGATTAAATTGTCTTTCTG
TCATCCTGATCTGATCTTCAGTTTCCAGAGGACCTGCAGA
GCTAACCTGTGGTGAATCTGCAGAAACGGTTTATCATTAA
CCAGCATCAACCGTCTCTACATGGTTAAACTGGTAAAGAG
TTGTGCAGGAACATTCAGCACATGTGCACAAACCAGCTCA
GACTTTCTTAGTGAAGTGTAAACACATGGACTGTCAGCGT
GTCGTTCATCAGGGATGCTTTCAAATGATCCAAAGTAACA
GTAAAGATGTTTTAATGTTACAAAAGATTACATGTCCTAT
AAATAAATGCTGTTTTTAGGCTGA

Related Transcripts

Transcripts related to atg10

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	atg10-201	Ensembl	864 nt
mRNA	atg10-202 (1) Ensembl	Ensembl	1,333 nt	Select Tool ZFIN BLAST
mRNA	atg10-203 (1) Ensembl	Ensembl	4,450 nt	Select Tool ZFIN BLAST

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations