Transcript

cacnb2a-208

ID
ZDB-TSCRIPT-110325-2598
Name
cacnb2a-208 Nomenclature History
Previous Names
  • cacnb2a-005
Transcript Type
aberrant processed transcript
Annotation Status
nonsense mediated decay
Annotation Method
Ensembl
Associated With Genes
Strain
TU
Non Reference Strain
Genome Resources
RNA Central
None
Note
None
Sequence
ENSDART00000171710 (1) [ Show ] (double-click sequence to select) [Download]
>tpe|ENSDART00000171710.2|gene_biotype:protein_coding|ENSDARG00000099045.2 transcript_biotype:nonsense_mediated_decay gene_symbol:cacnb2a cdna chromosome:GRCz11:7:71794235:71837265:-1
CTGGGACTGTTTGTAGAGCAGCTGGGTGGAGCTGAACGCA
CGCACACACACACACACACGGTCAGACAGATGTTCATAGA
CATGTACCTCTCAACCAGCGAGGAGTCAGATTTGGGTTCA
GCAGACTCATACACCAGTCGGCCATCAGACTCGGATGTGT
CTCTGGAGGAAGATAAAGAGACTTTACGCAGAGAAGCTGA
GAGACAGGCTCAGGCGCAACTCGACAAGGCCAAGAGTAAA
CCAGTGGCGTTTGCAGTGCGCACTAATGTTGGCTACAGTG
CTTCTTCTGAAGATGACGTCCCCGTGCCTGGAACGGGAAT
CTCATTTGATCCTAAAGATTTCCTTCATGTTAAAGAAAAA
TTTAATAACGACTGGTGGATCGGCCGCTTGGTGAAGGAAG
GCTGCGACATCGGTTTCATCCCAAGTCCAGTGAAGCTGGA
AAGCAGTCGCCTTCGCCAGGAGCAGCGCGCAAAACAAGGA
CGCTTTTACTCAAGTAAATCAGGGGCAAACTCTTCATCCA
GTTTAGGGGACATTGTTTCAAACTCACGGAAATCAACTCC
TCCCTCCTCAGCGGATCCCCTTCCAGCTGCAAACCAGTAC
TGGGAAACACCCATACACACTCAATCACACACACTCATAG
ACTACGGCCAATTTAGTTTCCTCAATTCCCTTATAGCGCA
TGTGTTTGTATGATTTGCAGTTCCTTGCAAGACTGTGTGT
TTGTGATCGCTGGTGATCGTGACACAGATCATGTGGTTGT
TGGCCTGAACTACATGTCAGCTTTACACACATGCAACTGC
CCTCGGACTATTTAAACTGTGGACATTGACGCCGCAGGTT
TAGATGCAGAGGAGAGCGATCCTCCTCCCCATCAGCGATC
TCCCAAAGCCAGCCCAAACACAGTCATATCCCCTTTAGCC
CGAGAGAAACGAATGCCTTTCTTTAAGAAGACGGAGCATG
CTCCTCCATATGATGTGGTGCCGTCGATGAGGCCGGTTGT
TCTCGTTGGACCTTCACTCAAGGGCTACGAGGTAACAGAT
ATGATGCAGAAAGCGCTGTTTGACTTTCTGAAGCACCGGT
TTGAGGGGAGGATAACCATCACAAGAGTGGCAGCTGATAT
CTCTCTGGCCAAACGCTCAGTACTGAACAACCCCAGTAAA
CACGCCATCATCGAGCGCTCAAACACACGCTCCAATCTAG
CGGAGGTTCAGAGCGAGATCGAGAGGATATTTGAGCTGGC
CCGAACGCTGCAGCTGGTGGTTTTGGACGCCGACACAATA
AACCATCCGTCACAGCTGGGGAAAACCTGTCTGGCACCCA
TCATTGTCTACATCAAGATCACCTCTCCAAAGGTTTTGCA
GAGATTAATCAAGTCCCGAGGAAAGTCTCAGGCCAAACAT
CTCAATGTACAGATGGTGGCAGCTGACAAACTGGCCCAGT
GCCCTTCAGAGCTCTTTGACATTATTCTAGATGAGAATCA
GCTGGAAGACGCCTGTGAGCACATGGCCGACTATCTGGAG
CTATACTGGAAGTCCACTCATCCTCCCAGTGGCGCTCCGT
CCACTCCACTGCTGGACAAACTGAGCGCAGTGACCGCAGC
TGCAGTGGCCTGCAAAGAGCAGCTGACCAACACACAACCC
AAGGGCACCGGCAGTGATGAGCATGCAGATCGAGCAGCGG
CCAACAGGACTAGCTTTTATGAAGACTATCATCACCATCA
TCATCCTCAACAGCAACACTACCAGACACAGAAGCAAGAA
AGCTTTGAAGAAGAAGAGGAAGAAGAAGATGATGATGAAG
AGAATACTGACCAAAGACACGACAACAGAGACCAACAAAA
CCATCACAAAAACCAGCACTCTTCATCCACACGGACCGAA
CGCCATCATCACCACCGCCACCACCACCATCATCATCATC
ACAGACACCATCATAGTCGCACCGCCAGAACACTGTCCAA
ACAGGAGACACTAGAGTCCACTGAAACCCAGACACACTCG
CAACCGCAGCAGGAGGAGGAGCAGGAGTCTGTTCAACCCA
ACCATCATCGTCATCACCACCATCACCATCGTCATCATCA
CCGTAATGAGAAAGAGAAGGAATACGATCACAACGAGAGG
AACAGCCGGCAAAGAGGAAAGCAGAAATCACAACGAGAAC
ACCACCATCATCACGAGAGGAGAAAACATTATATAGAACA
ATGACA

OTTDART00000050653 (1) [ Show ] (double-click sequence to select) [Download]
>tpe|OTTDART00000050653|OTTDARG00000035580|ZDB-GENE-080808-7 cacnb2a|OTTDARP00000039773 cacnb2a-005 LG_ CU607104.20 Danio rerio protein_coding KNOWN, 2206 bp
CTGGGACTGTTTGTAGAGCAGCTGGGTGGAGCTGAACGCA
CGCACACACACACACACACGGTCAGACAGATGTTCATAGA
CATGTACCTCTCAACCAGCGAGGAGTCAGATTTGGGTTCA
GCAGACTCATACACCAGTCGGCCATCAGACTCGGATGTGT
CTCTGGAGGAAGATAAAGAGACTTTACGCAGAGAAGCTGA
GAGACAGGCTCAGGCGCAACTCGACAAGGCCAAGAGTAAA
CCAGTGGCGTTTGCAGTGCGCACTAATGTTGGCTACAGTG
CTTCTTCTGAAGATGACGTCCCCGTGCCTGGAACGGGAAT
CTCATTTGATCCTAAAGATTTCCTTCATGTTAAAGAAAAA
TTTAATAACGACTGGTGGATCGGCCGCTTGGTGAAGGAAG
GCTGCGACATCGGTTTCATCCCAAGTCCAGTGAAGCTGGA
AAGCAGTCGCCTTCGCCAGGAGCAGCGCGCAAAACAAGGA
CGCTTTTACTCAAGTAAATCAGGGGCAAACTCTTCATCCA
GTTTAGGGGACATTGTTTCAAACTCACGGAAATCAACTCC
TCCCTCCTCAGCGGATCCCCTTCCAGCTGCAAACCAGTAC
TGGGAAACACCCATACACACTCAATCACACACACTCATAG
ACTACGGCCAATTTAGTTTCCTCAATTCCCTTATAGCGCA
TGTGTTTGTATGATTTGCAGTTCCTTGCAAGACTGTGTGT
TTGTGATCGCTGGTGATCGTGACACAGATCATGTGGTTGT
TGGCCTGAACTACATGTCAGCTTTACACACATGCAACTGC
CCTCGGACTATTTAAACTGTGGACATTGACGCCGCAGGTT
TAGATGCAGAGGAGAGCGATCCTCCTCCCCATCAGCGATC
TCCCAAAGCCAGCCCAAACACAGTCATATCCCCTTTAGCC
CGAGAGAAACGAATGCCTTTCTTTAAGAAGACGGAGCATG
CTCCTCCATATGATGTGGTGCCGTCGATGAGGCCGGTTGT
TCTCGTTGGACCTTCACTCAAGGGCTACGAGGTAACAGAT
ATGATGCAGAAAGCGCTGTTTGACTTTCTGAAGCACCGGT
TTGAGGGGAGGATAACCATCACAAGAGTGGCAGCTGATAT
CTCTCTGGCCAAACGCTCAGTACTGAACAACCCCAGTAAA
CACGCCATCATCGAGCGCTCAAACACACGCTCCAATCTAG
CGGAGGTTCAGAGCGAGATCGAGAGGATATTTGAGCTGGC
CCGAACGCTGCAGCTGGTGGTTTTGGACGCCGACACAATA
AACCATCCGTCACAGCTGGGGAAAACCTGTCTGGCACCCA
TCATTGTCTACATCAAGATCACCTCTCCAAAGGTTTTGCA
GAGATTAATCAAGTCCCGAGGAAAGTCTCAGGCCAAACAT
CTCAATGTACAGATGGTGGCAGCTGACAAACTGGCCCAGT
GCCCTTCAGAGCTCTTTGACATTATTCTAGATGAGAATCA
GCTGGAAGACGCCTGTGAGCACATGGCCGACTATCTGGAG
CTATACTGGAAGTCCACTCATCCTCCCAGTGGCGCTCCGT
CCACTCCACTGCTGGACAAACTGAGCGCAGTGACCGCAGC
TGCAGTGGCCTGCAAAGAGCAGCTGACCAACACACAACCC
AAGGGCACCGGCAGTGATGAGCATGCAGATCGAGCAGCGG
CCAACAGGACTAGCTTTTATGAAGACTATCATCACCATCA
TCATCCTCAACAGCAACACTACCAGACACAGAAGCAAGAA
AGCTTTGAAGAAGAAGAGGAAGAAGAAGATGATGATGAAG
AGAATACTGACCAAAGACACGACAACAGAGACCAACAAAA
CCATCACAAAAACCAGCACTCTTCATCCACACGGACCGAA
CGCCATCATCACCACCGCCACCACCACCATCATCATCATC
ACAGACACCATCATAGTCGCACCGCCAGAACACTGTCCAA
ACAGGAGACACTAGAGTCCACTGAAACCCAGACACACTCG
CAACCGCAGCAGGAGGAGGAGCAGGAGTCTGTTCAACCCA
ACCATCATCGTCATCACCACCATCACCATCGTCATCATCA
CCGTAATGAGAAAGAGAAGGAATACGATCACAACGAGAGG
AACAGCCGGCAAAGAGGAAAGCAGAAATCACAACGAGAAC
ACCACCATCATCACGAGAGGAGAAAACATTATATAGAACA
ATGACA

Segment Relationships
Protein Products
No data available
Supporting Sequences
Citations