Transcript

trappc1-203

ID

ZDB-TSCRIPT-100915-429

Name

trappc1-203 Nomenclature History

Previous Names

trappc1-003

Transcript Type

aberrant processed transcript

Annotation Status

nonsense mediated decay

Annotation Method

Ensembl

Associated With Genes

trappc1 (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000139547 (1) [ Show ] (double-click sequence to select)

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>tpe|ENSDART00000139547.3|gene_biotype:protein_coding|ENSDARG00000039005.7 transcript_biotype:nonsense_mediated_decay cdna chromosome:GRCz11:23:44546343:44550528:1
AGTCTCAGGCAGACAGCCCTGCGGAAGATGACTGTTCATA
ACTTGTATATATTTGATCGCAATGGCACCTGCCTTCACTA
CAGCGAGTGGAACCGCAAGAAACAGGCCGGAATCTCCAAA
GAAGAGATGGCGCTTGAGCTTGGATGATTTCATGCATTCA
TTGAAGAGAATCGCTTGACAAAGAACACACTGAGGAGTTT
AAGCTGATGTACGGGATGCTGTTCTCCATCCGCTCTTTCG
TCAGTAAGATGAGTCCACTGGACATGAAAGACGGATTCCT
GTCGTTCCAGACCAGCCGCTATAAACTGCATTATTATGAA
ACTCCCACAGGAATCAGGCTGGTGATGAACACAGACCTCA
GTGTGCCGAACTGCAGAGAAACCCTGCAGCAGATCTACAG
CACTTTGTATGTGGATTTGATCGTGAAGAACCCGCTGTGT
GTTCTGGGTGAGTCTCTGCAGAGTGAACTCTTCAACTCTA
AGCTGGACTCCTTCATCCGAGCGCTACCGTTCTTCAGTGT
GCGCGCAGCATGAGCCCACATCCCTTTATCCCTTCATCAT
CACAATAAAACACCACCAGCTTCTGTTCGCATTCACTCTG
TTCCCCAATCACTGCTCAGTTCGTACTTGTGTTGAATTTA
AATAAATAACTCTTTTTATGA

OTTDART00000047058 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000047058|OTTDARG00000033463|ZDB-GENE-040718-242 trappc1|OTTDARP00000037027 trappc1-003 LG_ CU929143.18 Danio rerio protein_coding KNOWN, 661 bp
AGTCTCAGGCAGACAGCCCTGCGGAAGATGACTGTTCATA
ACTTGTATATATTTGATCGCAATGGCACCTGCCTTCACTA
CAGCGAGTGGAACCGCAAGAAACAGGCCGGAATCTCCAAA
GAAGAGATGGCGCTTGAGCTTGGATGATTTCATGCATTCA
TTGAAGAGAATCGCTTGACAAAGAACACACTGAGGAGTTT
AAGCTGATGTACGGGATGCTGTTCTCCATCCGCTCTTTCG
TCAGTAAGATGAGTCCACTGGACATGAAAGACGGATTCCT
GTCGTTCCAGACCAGCCGCTATAAACTGCATTATTATGAA
ACTCCCACAGGAATCAGGCTGGTGATGAACACAGACCTCA
GTGTGCCGAACTGCAGAGAAACCCTGCAGCAGATCTACAG
CACTTTGTATGTGGATTTGATCGTGAAGAACCCGCTGTGT
GTTCTGGGTGAGTCTCTGCAGAGTGAACTCTTCAACTCTA
AGCTGGACTCCTTCATCCGAGCGCTACCGTTCTTCAGTGT
GCGCGCAGCATGAGCCCACATCCCTTTATCCCTTCATCAT
CACAATAAAACACCACCAGCTTCTGTTCGCATTCACTCTG
TTCCCCAATCACTGCTCAGTTCGTACTTGTGTTGAATTTA
AATAAATAACTCTTTTTATGA

Related Transcripts

Transcripts related to trappc1

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	trappc1-203	Ensembl	661 nt
mRNA	trappc1-201 (1) Ensembl	Ensembl	633 nt	Select Tool ZFIN BLAST
mRNA	trappc1-202 (1) Ensembl	Ensembl	622 nt	Select Tool ZFIN BLAST

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations