Transcript

zgc:153317-003

ID

ZDB-TSCRIPT-091203-11

Name

zgc:153317-003 Nomenclature History

Previous Names

ch1073-404f17.3-003

Transcript Type

ncRNA

Annotation Status

retained intron

Annotation Method

Ensembl

Associated With Genes

zgc:153317 (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000134228 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|ENSDART00000134228.2|gene_biotype:protein_coding|ENSDARG00000092903.3 transcript_biotype:retained_intron gene_symbol:C18H15orf48 cdna chromosome:GRCz11:18:5526083:5527072:-1
CTCCCATCATCAGCTCATCGAGACTCGTCTTTACAGAGTA
ATCTGTAACTGCTGAAAGATGAACGGAGGATTGATACAGT
TGCTCAGGAAAAGGAAAGAGTTAATTCCTCTGCTTGGGAT
TGTTAGTTGTGCTGCATTTGGAGCGACAACAACCATGATT
TACTTCCTGCTGACCAAACCCGATGTCATGTGAGAAACCT
GTCTCTTTATTTGTATGCAATTAAACACCATTACTGGTAA
TCTGCATAAACTATTACCTGTATTGTTTATGTTCATTATA
GTGATCTACAAATTAAGTTTCCAACAGTATTTAAAGGCAA
AGTTTATCCAAAAGTGAAAAACTCTGTCATTTACACTTGA
AAACAAAGGAGGATACGCTGAAAGGTTCAGATTCTTCACA
ATATCTTGTCCAGAAGACGTTCATAGCAGTGTAGGATCAC
TTCAGTGAAATGTTCATTTTGGGTGTACTGTGCCTTTAAA
TGAAATTAATATTTCAACACGCATAAAACAATGTGAAAGC
GCCTGAGGGACACCAGCGGGTCTGAAAGCAATCTGCAATG
TGAATGTGTACCATTGTAGAAGCTCAAGAGGGATCAAATG
TTTTGACTTTTACAGTTTAAACAAGACGGGAAATCCCGAG
CCCTGGGAGATGCTGGATCCATCAAAACCACAGAAGGTAA
AATTTAATCGATGTATTTCCGTGTGTGTTTTGTGGATCAG
GACCGACAGGTTATGTTAATGTTCACCATTGTTTTAAGAC
AGATGTACAACTGTTTCCTAAGCATCTGTTTTCCTCATGC
CAGGCCAGTCATGGCACCAAACTGTGGGGTAAACGGATTC

OTTDART00000045259 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000045259|OTTDARG00000032392|ZDB-GENE-060825-309 zgc:153317|no_translation CH1073-404F17.3-003 LG_ CU595864.9 Danio rerio protein_coding KNOWN, 840 bp
CTCCCATCATCAGCTCATCGAGACTCGTCTTTACAGAGTA
ATCTGTAACTGCTGAAAGATGAACGGAGGATTGATACAGT
TGCTCAGGAAAAGGAAAGAGTTAATTCCTCTGCTTGGGAT
TGTTAGTTGTGCTGCATTTGGAGCGACAACAACCATGATT
TACTTCCTGCTGACCAAACCCGATGTCATGTGAGAAACCT
GTCTCTTTATTTGTATGCAATTAAACACCATTACTGGTAA
TCTGCATAAACTATTACCTGTATTGTTTATGTTCATTATA
GTGATCTACAAATTAAGTTTCCAACAGTATTTAAAGGCAA
AGTTTATCCAAAAGTGAAAAACTCTGTCATTTACACTTGA
AAACAAAGGAGGATACGCTGAAAGGTTCAGATTCTTCACA
ATATCTTGTCCAGAAGACGTTCATAGCAGTGTAGGATCAC
TTCAGTGAAATGTTCATTTTGGGTGTACTGTGCCTTTAAA
TGAAATTAATATTTCAACACGCATAAAACAATGTGAAAGC
GCCTGAGGGACACCAGCGGGTCTGAAAGCAATCTGCAATG
TGAATGTGTACCATTGTAGAAGCTCAAGAGGGATCAAATG
TTTTGACTTTTACAGTTTAAACAAGACGGGAAATCCCGAG
CCCTGGGAGATGCTGGATCCATCAAAACCACAGAAGGTAA
AATTTAATCGATGTATTTCCGTGTGTGTTTTGTGGATCAG
GACCGACAGGTTATGTTAATGTTCACCATTGTTTTAAGAC
AGATGTACAACTGTTTCCTAAGCATCTGTTTTCCTCATGC
CAGGCCAGTCATGGCACCAAACTGTGGGGTAAACGGATTC

Related Transcripts

Transcripts related to zgc:153317

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	zgc:153317-201 (1) Ensembl	Ensembl	651 nt	Select Tool ZFIN BLAST
mRNA	zgc:153317-205 (1) Ensembl	Ensembl	266 nt	Select Tool ZFIN BLAST
mRNA	zgc:153317-206 (1) Ensembl	Ensembl	717 nt	Select Tool ZFIN BLAST
ncRNA	zgc:153317-002 (1) Ensembl	Ensembl	1,824 nt	Select Tool ZFIN BLAST
ncRNA	zgc:153317-003	Ensembl	840 nt
ncRNA	zgc:153317-004 (1) Ensembl	Ensembl	830 nt	Select Tool ZFIN BLAST

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations