Transcript

cst14a.1-202

ID

ZDB-TSCRIPT-091110-513

Name

cst14a.1-202 Nomenclature History

Previous Names

ch211-140b10.9-003
ch211-161h7.6-001
cst14a.1-001
si:ch211-161h7.6-001

Transcript Type

aberrant processed transcript

Annotation Status

nonsense mediated decay

Annotation Method

Ensembl

Associated With Genes

cst14a.1 (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000136663 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|ENSDART00000136663.2|gene_biotype:protein_coding|ENSDARG00000028164.9 transcript_biotype:nonsense_mediated_decay cdna chromosome:GRCz11:24:20916751:20918412:1
CAGGAAGCAAACTTTCCCAACAGCCATTCAATCATTTAAT
CTAGCTTGTAAGTAAAAAACTGAGAGCGTGTTTTGCTTAC
AAATTTTATTCAAAATGCCTTTAGTTCGTGGCGGAACTTC
CGAAGCTAAAGATGCAAATGAAGAAGTGCAGAAAATATGC
GACAAGATGAAGGCTGATGCTGAGGAAAAAGCTGGGCGCA
AGTTTGACGTTTTCACTGCTAAATCTTTTAAAACGCAGGT
TGTTGCGGGGACAAATTACTTTGTTAAGGTGCATGTAGGT
GATGAAGACTATGTTCATCTGCGTGTCTACAAAACACTGC
CTCATGCTGGAGAAACACTGCAGCTGACAAGCATACAGAC
AGCCAAGGCTCATCATGATGCTATTGAATACTTCTGAAGC
AGAACAACAGAAAACATCGCCAGTACTGCCCCAAATACAC
ACAAACCCATTTGTAAACACTACCTAGAAGGAGCCAGCCA
ATTTTCAACAGCATGTTTATAATCCAGACGATGAAGAATG
CATACAACAACACAGCAGGACTGCAGTACATTGGGCCATT
AACACTCCTGAGAAAAACAAAAAAACATACTGTAAATCAA
CTTCAGAGTCATATTCTTATAAATGACATCTCGTTTTTGT
GTTAAAGCTTTACCTCCTGCATGTAGTGAAGAGAATGTAA
GCACTCATGAGCGACAGCCAGATGTAAATGACACCCCAAA
CTATGCGACTGTATTTCAGTACTGCTCATTTTGGAGGTAC
TTGGAGAGACAATTTTTTCTGAGGTGGTACTTGATGGATA
AGTTTGAGAACCACTGA

OTTDART00000044487 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000044487|OTTDARG00000031923|ZDB-GENE-141031-1 cst14a.1|OTTDARP00000035168 CH211-161H7.6-001 LG_ CR450812.5 Danio rerio protein_coding NOVEL, 817 bp
CAGGAAGCAAACTTTCCCAACAGCCATTCAATCATTTAAT
CTAGCTTGTAAGTAAAAAACTGAGAGCGTGTTTTGCTTAC
AAATTTTATTCAAAATGCCTTTAGTTCGTGGCGGAACTTC
CGAAGCTAAAGATGCAAATGAAGAAGTGCAGAAAATATGC
GACAAGATGAAGGCTGATGCTGAGGAAAAAGCTGGGCGCA
AGTTTGACGTTTTCACTGCTAAATCTTTTAAAACGCAGGT
TGTTGCGGGGACAAATTACTTTGTTAAGGTGCATGTAGGT
GATGAAGACTATGTTCATCTGCGTGTCTACAAAACACTGC
CTCATGCTGGAGAAACACTGCAGCTGACAAGCATACAGAC
AGCCAAGGCTCATCATGATGCTATTGAATACTTCTGAAGC
AGAACAACAGAAAACATCGCCAGTACTGCCCCAAATACAC
ACAAACCCATTTGTAAACACTACCTAGAAGGAGCCAGCCA
ATTTTCAACAGCATGTTTATAATCCAGACGATGAAGAATG
CATACAACAACACAGCAGGACTGCAGTACATTGGGCCATT
AACACTCCTGAGAAAAACAAAAAAACATACTGTAAATCAA
CTTCAGAGTCATATTCTTATAAATGACATCTCGTTTTTGT
GTTAAAGCTTTACCTCCTGCATGTAGTGAAGAGAATGTAA
GCACTCATGAGCGACAGCCAGATGTAAATGACACCCCAAA
CTATGCGACTGTATTTCAGTACTGCTCATTTTGGAGGTAC
TTGGAGAGACAATTTTTTCTGAGGTGGTACTTGATGGATA
AGTTTGAGAACCACTGA

Related Transcripts

Transcripts related to cst14a.1

Type	Name	Annotation Method	Has Havana Data	Length (nt)	Analysis
aberrant processed transcript	cst14a.1-202	Ensembl		817 nt
mRNA	cst14a.1-201 (1) Ensembl	Ensembl		660 nt	Select Tool ZFIN BLAST

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations