Transcript

zgc:101748-004

ID

ZDB-TSCRIPT-091110-216

Name

zgc:101748-004 Nomenclature History

Previous Names

ch1073-74b11.1-003
ch1073-74b11.1-004
ottdart00000043336

Transcript Type

ncRNA

Annotation Status

retained intron

Annotation Method

Ensembl

Associated With Genes

spout1 (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000139462 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|ENSDART00000139462.2|gene_biotype:protein_coding|ENSDARG00000019707.7 transcript_biotype:retained_intron gene_symbol:spout1 cdna chromosome:GRCz11:21:3796767:3803420:1
AATTACTGCACTCGTTATACATTTAAAAACTGTGATAACT
AGCTTTAGTAAAACGTTGTTTTATGTTCAACTGATGATGT
AAAATGTATGTAATGTTAATGCATGTTATAATATTTGCAT
TTGTAGGGCGAAGAGAGAAAAAACTGGAAGAAATGGAAAG
AACAAAAGAAAGAAGAGAAGCGGCGACGAAAAGAGACCAA
ACTCATCCAGCAGCTGGAGAAACAGAAGCTGAAGAAAGAG
GAGGAAAATCAACAGCAGGTTAAACAGGAAGAGAAGGAAA
GTAAAGGTCGTCTTTATACAGTGAGCGTGGCTCTGCCTGG
ATCAGTGATGGATAACGCTCAGTCTCCAGAGCTGCGGACG
TATCTGGCTGGTCAGATCGCCCGAGCGTGTGCTGTTTTCT
GTGTGGATGAGGTGGTCATTTTTGACGAGCTGGGAGAAGA
CGCAAAGAGCGTTGAAGGAGAGTTTAAAGGTGTGGGTAAG
AAAGGCCAGTCCTGTGTCCAGCTGGCACGCATCCTGCAGT
ACCTCGAGTGTCCACAATATCTACGGAAATTCTTCTTCCC
GAAGCATCAGGATCTGCAGTTTGCTGGTCTGTTGAATCCT
CTGGACAGCCCTCATCACATGCGCATTGATGAAGAGGCGG
AGTTTCGAGAGGGCGTGGTTCTTGATCGGCCAGTCAAAGC
AGGAAAAGGCTCCTTTGTCAACTGCGGCATGAGGAAGGAA
GTTCAGATCGATAAACAGCTGAAAACGGGACTGAGAGTGA
CCGTACAGCTCAACGAGAGCCAAAACAAAGGTGCGCAAAA
TATTCTAAAA

OTTDART00000043336 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000043336|OTTDARG00000031162|ZDB-GENE-040912-53 zgc:101748|no_translation CH1073-74B11.1-004 LG_ CU524608.6 Danio rerio protein_coding NOVEL, 810 bp
AATTACTGCACTCGTTATACATTTAAAAACTGTGATAACT
AGCTTTAGTAAAACGTTGTTTTATGTTCAACTGATGATGT
AAAATGTATGTAATGTTAATGCATGTTATAATATTTGCAT
TTGTAGGGCGAAGAGAGAAAAAACTGGAAGAAATGGAAAG
AACAAAAGAAAGAAGAGAAGCGGCGACGAAAAGAGACCAA
ACTCATCCAGCAGCTGGAGAAACAGAAGCTGAAGAAAGAG
GAGGAAAATCAACAGCAGGTTAAACAGGAAGAGAAGGAAA
GTAAAGGTCGTCTTTATACAGTGAGCGTGGCTCTGCCTGG
ATCAGTGATGGATAACGCTCAGTCTCCAGAGCTGCGGACG
TATCTGGCTGGTCAGATCGCCCGAGCGTGTGCTGTTTTCT
GTGTGGATGAGGTGGTCATTTTTGACGAGCTGGGAGAAGA
CGCAAAGAGCGTTGAAGGAGAGTTTAAAGGTGTGGGTAAG
AAAGGCCAGTCCTGTGTCCAGCTGGCACGCATCCTGCAGT
ACCTCGAGTGTCCACAATATCTACGGAAATTCTTCTTCCC
GAAGCATCAGGATCTGCAGTTTGCTGGTCTGTTGAATCCT
CTGGACAGCCCTCATCACATGCGCATTGATGAAGAGGCGG
AGTTTCGAGAGGGCGTGGTTCTTGATCGGCCAGTCAAAGC
AGGAAAAGGCTCCTTTGTCAACTGCGGCATGAGGAAGGAA
GTTCAGATCGATAAACAGCTGAAAACGGGACTGAGAGTGA
CCGTACAGCTCAACGAGAGCCAAAACAAAGGTGCGCAAAA
TATTCTAAAA

Related Transcripts

Transcripts related to spout1

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	spout1-201 (1) Ensembl	Ensembl	1,396 nt	Select Tool ZFIN BLAST
mRNA	spout1-203 (1) Ensembl	Ensembl	722 nt	Select Tool ZFIN BLAST
mRNA	spout1-204 (1) Ensembl	Ensembl	918 nt	Select Tool ZFIN BLAST
ncRNA	zgc:101748-004	Ensembl	810 nt

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations