Transcript

scarf1-202

ID
ZDB-TSCRIPT-090929-8804
Name
scarf1-202 Nomenclature History
Previous Names
  • scarf1-001
Transcript Type
mRNA
Annotation Status
Annotation Method
Ensembl
Associated With Genes
Strain
TU
Non Reference Strain
Genome Resources
RNA Central
None
Note
None
Sequence
ENSDART00000138401 (1) [ Show ] (double-click sequence to select) [Download]
>tpe|ENSDART00000138401.3|gene_biotype:protein_coding|ENSDARG00000077285.6 transcript_biotype:protein_coding gene_symbol:scarf1 cdna chromosome:GRCz11:15:28209966:28223906:-1
GGAAACTTGCAGAGGAAACAAAGGGATTCGGAGAGCCCAT
TTTGCTAAAGGGACTCGACTGGATCTTTTCTGTTCCACTA
ATACAAAACTAACCTGTACTGGTGCTGTGGTGGGAGAAGG
TGGCACAGGTTTTGGTCGGTCCGGAGGGAATGGACACCTT
TCTGACCTCATTTGGACTGATGCTCATGTGTGTCCAGTAC
TCAGCTCAGAGACTCTCTCTGACCGGGAAGAACGTCTGCC
TCAGTGTCAGGGATTCCTCTGCAATATGTTGTTCTGGATG
GGGCCAGAGCGGTGATGAATGCACTGTCCCTCTCTGTGAG
GGAGAAAGAGCCTGTCTGCAGGATGAAGTGTGTGTTTACC
CTGGACTCTGTCGATGTAAAGCTGGATTTTACGGGTACCA
GTGCAAAGCTCCTTGTCCTCCTGAGTTTTGGGGACCAGAC
TGTCGCGAGTTCTGTCCCTGCCACCCTCACGGACTCTGTG
ATCCAGCCACTGGCGTATGCTCATGCCTGCCCAACCGCTG
GGGCAGCTTGTGCCAGAACAGCTGCAAATGTGGCCGCCAT
GGCAAATGTGACCCTGTCTATGGGAACTGCACCTGTGAGG
AGGGCTGGTGGACATCCACTTGCTCCAAAGCATGTCAGTG
CCACCTCGCTACCTCCACCTGTGACCAAGCCACAGGCCGC
TGCATTTGCAATGAGGGCTATTGGGGCCAAAAGTGCAGCC
TGCCATGCAACTGCTATGTGTCCCCTTGTCAGCAGCGCAC
TGGGACATGCCAGTGCCTGCATGGCTGGTGGGGCCCGTCC
TGTGACCGCCGCTGCATTTGCAATCTCAACAATGCTGACT
GTGATGTGCAAACTGGTGGCTGTTTGTGCTACCCAGGTTA
CAAAGAGCCTTTCTGCAATGAGCCTTGTGACAGTGGAAAA
TATGGCCGAGGCTGTAAGAACAGCTGTGGACGTTGTGAAG
GAGGCAGGCCTTGCTCTAAGCTGGACGGCCTGTGTGATGC
CTGTGAACCAGGATGGAATGGCACTCGCTGTGATCAACGC
TGTCCTGCGGGTTATTATGGCCATCGCTGCCAAGAAATTT
GTCCGCATTGTCGAAACATGGACCCATGTGACCCGGAAAC
TGGTGCATGTTTGCAGTGTAATCCTGGCTGGACTGGACCA
AGATGTGACAAACCCTGCACAGATGGTAGATACGGAGATG
GCTGTCGCTTCCTCTGTAAAACTTGCAATCATGGCCACTG
CGACCATGTGACAGGAAGATGCATTTGTCTTCCTGGCTTT
CAGGGTGAGAGCTGTAACAGCACATGTCCTTTTAATCTTT
ATGGCTTCAACTGCTCCTCCACATGTGATTGTGGAAGTCA
AGCCTGCCATCCAGCCACTGGGGCTTGTCCAAACAGTATC
AGAGCTGGTCTTTTAGCAGGGCTTTTGATTCCTCTCTGCA
TATTAATACTCGCCTTGTTGTTCTGCTGCTGCTGTTGTGG
GAGGCCAGTCGAAGGAAAGGAAAGGGTCACAGTTGGAGAT
GGCAGTCCTGCAGTCCGCATGAAGCACCATGTTTATACTG
TGTTGGCCAACATGGGTTCAGCAATGCCTTGCATCACTCT
TTGGTCATCTGGTTTGCCCAGGGTTACTGTCTCGCATCAT
GATCCTGAGCTCACATTTAACCACAGCTTCATCGAGCAGC
CATCATCCGGCTGGGTAATAGATTCATTCGAAACTGATGA
GGATGGAGAAGCTGTTTACTGCGAACCACCCAGGGAAGAT
GTTCTTACAGAGGCCGGCGGAGAGCTTCAGGAGCTGAATT
CCAAGTGTAACTTCTTCCCTGACCCATCAACCTTCAGCAG
CGAGGACATGTCACAAGCTTTTGGCATCCCCCGTACCTCC
AGCATCGCCAAATCCAAACGCCCTTCAGTGTCATTCGCAG
AGGGTACAAAGTTCAGCCCAAAAGAGCGTCGCAGTTCAAC
TCAAGATCTGCAAGGGACCGCTCGAAAACCCAAACCCTGG
GGTGTCCTGATGATCTCCGCCCTGCAAGGAGGACAGGGAA
ACCAGAATAACGAAACGGAAACAGAGAAAGAAGAAAAAAA
CGATGAGGAGAACATCTCTGAGGAGCAAAGAGCTTCCTCT
GAAACACTACAAAATGATTCGGAAAGATATAGTTCGGGCC
CACAGAGAACTCACCTCACTGTACCCGGTGGAAGACGACG
CACTCTTTCTAACCCCAAAAAGAACATCCAGTCATCTGAC
GGCGGACAGGACGCAGATTCAGAGAAGTTAACAACAGTAT
ACGTTACTGTAGGTAAGACCTCCAAAATGGTCAAGCAAGA
GCCTCCTTCAGAAGGGCCTGTTCAGGCGATGCTGCGCAGA
CTAGGAAGCCTCCAGAGGCAAAAAGAAGAAGTTGCTAAAG
GCAAGGCCCAATCGATTGTTAAGCCTCCACGGAGGAAACT
AGGTGCCCGAGCCAGTGCATGGGAGCAAGCGAGCGGGTCA
GGCCAATCAGAAGTGGTCATGAGGAAACCCAGTCGTAAAA
AACACAGCTCTCTCAGCTCTCCATGCATAGTCGGGGCAAT
AGACTCTCCTCAAGAGAACAGCGCCCCCAAGAGGCCGCTG
TCCTCCATTTTAAAAAGTGTTCCTGAGAGTGATCCATTTC
AAAGTTTAGAGGTGGAACCGAACAGTGAGGAGACTGGCAT
ACAGACTGAGCACACTTATGAGACTGTGGCTCTGCCTGAC
ACTGTGTCCACCTCTTCAGAGATTATTATTAATGACACAG
TTATGGACCAAGCAGAAAATGAGCCCAATTATGAGAATGT
TTATTTAAAGCATTGATAACACTGCTACATCTTATGCTTT
TAAGAGTGTGTTCACAATTTAATTATTTTGGTTTAACAGA
TTCCGAACCAATAATGAAAAAATATTTGTTGAAGTCAAAA
TGATTAGCCCTCTTGTGAATTTCTTTTTCTTTTTCAATAA
TTTCCTAAACGATGTTTAACAGAGAAAGGAATTTTTTTTT
TTTTACTGTATTTCCTATAATATTTTTTTTTTCTTTTGGA
AAAAGTCTTATTTGTTTTATTTGGCTAGAATAAAAGCAGT
TTTATTTTTAACAAATTATTTTAAGGTCAATATTATTAGC
CTCCTTAAGCAATATTTTTTCCTCGATTGTCTACAGAACA
AACCACTTATGCAATGACTTGCCTAATTAACCTTGTTAAG
CCTTTAAATGTCACTTCAAGCTAAATACTAGTATCTCGAA
AACTATCTAGTAAAATATTATGGACTGTCATTATGGTAAA
GATAAAAGAACTCAGTTACTAGAAATTAGTTATTAAAACT
ATTATGTTTAGAAATGTGTTGAAAACTACATACAGAAAAG
TATATACAAAAAATAATAACTCTAATAATTATTATTTAAA
TTATACTACTAATTCTGACTTCAACTGTATATTTAGCAAC
AGATATAGTTTTAAACACATTCATTCTATGTGTATGCATG
TGAAGACATTTTATCATTTGAGAACTAAATTGTGTAAAGG
CAAAAAAAGACGCACAAATCAAAATCTACTACAAACTTTT
GAGACAAATTTCTGACATCTGTAGGTGAACGAGTAATATT
GTGCCTATGAAGAGAAACATCTGTGAACACACTCTTAAAG
GGCATTACTTTCTTCTTTAACTTGTACTGTATGTTTTAAT
TATATAAACACATCTGCTTAAAAAA

OTTDART00000026111 (1) [ Show ] (double-click sequence to select) [Download]
>tpe|OTTDART00000026111|OTTDARG00000020763|ZDB-GENE-030131-8778 scarf1|OTTDARP00000021444 CH211-209M4.2-001 LG_ CR522882.5 Danio rerio protein_coding KNOWN, 3705 bp
GGAAACTTGCAGAGGAAACAAAGGGATTCGGAGAGCCCAT
TTTGCTAAAGGGACTCGACTGGATCTTTTCTGTTCCACTA
ATACAAAACTAACCTGTACTGGTGCTGTGGTGGGAGAAGG
TGGCACAGGTTTTGGTCGGTCCGGAGGGAATGGACACCTT
TCTGACCTCATTTGGACTGATGCTCATGTGTGTCCAGTAC
TCAGCTCAGAGACTCTCTCTGACCGGGAAGAACGTCTGCC
TCAGTGTCAGGGATTCCTCTGCAATATGTTGTTCTGGATG
GGGCCAGAGCGGTGATGAATGCACTGTCCCTCTCTGTGAG
GGAGAAAGAGCCTGTCTGCAGGATGAAGTGTGTGTTTACC
CTGGACTCTGTCGATGTAAAGCTGGATTTTACGGGTACCA
GTGCAAAGCTCCTTGTCCTCCTGAGTTTTGGGGACCAGAC
TGTCGCGAGTTCTGTCCCTGCCACCCTCACGGACTCTGTG
ATCCAGCCACTGGCGTATGCTCATGCCTGCCCAACCGCTG
GGGCAGCTTGTGCCAGAACAGCTGCAAATGTGGCCGCCAT
GGCAAATGTGACCCTGTCTATGGGAACTGCACCTGTGAGG
AGGGCTGGTGGACATCCACTTGCTCCAAAGCATGTCAGTG
CCACCTCGCTACCTCCACCTGTGACCAAGCCACAGGCCGC
TGCATTTGCAATGAGGGCTATTGGGGCCAAAAGTGCAGCC
TGCCATGCAACTGCTATGTGTCCCCTTGTCAGCAGCGCAC
TGGGACATGCCAGTGCCTGCATGGCTGGTGGGGCCCGTCC
TGTGACCGCCGCTGCATTTGCAATCTCAACAATGCTGACT
GTGATGTGCAAACTGGTGGCTGTTTGTGCTACCCAGGTTA
CAAAGAGCCTTTCTGCAATGAGCCTTGTGACAGTGGAAAA
TATGGCCGAGGCTGTAAGAACAGCTGTGGACGTTGTGAAG
GAGGCAGGCCTTGCTCTAAGCTGGACGGCCTGTGTGATGC
CTGTGAACCAGGATGGAATGGCACTCGCTGTGATCAACGC
TGTCCTGCGGGTTATTATGGCCATCGCTGCCAAGAAATTT
GTCCGCATTGTCGAAACATGGACCCATGTGACCCGGAAAC
TGGTGCATGTTTGCAGTGTAATCCTGGCTGGACTGGACCA
AGATGTGACAAACCCTGCACAGATGGTAGATACGGAGATG
GCTGTCGCTTCCTCTGTAAAACTTGCAATCATGGCCACTG
CGACCATGTGACAGGAAGATGCATTTGTCTTCCTGGCTTT
CAGGGTGAGAGCTGTAACAGCACATGTCCTTTTAATCTTT
ATGGCTTCAACTGCTCCTCCACATGTGATTGTGGAAGTCA
AGCCTGCCATCCAGCCACTGGGGCTTGTCCAAACAGTATC
AGAGCTGGTCTTTTAGCAGGGCTTTTGATTCCTCTCTGCA
TATTAATACTCGCCTTGTTGTTCTGCTGCTGCTGTTGTGG
GAGGCCAGTCGAAGGAAAGGAAAGGGTCACAGTTGGAGAT
GGCAGTCCTGCAGTCCGCATGAAGCACCATGTTTATACTG
TGTTGGCCAACATGGGTTCAGCAATGCCTTGCATCACTCT
TTGGTCATCTGGTTTGCCCAGGGTTACTGTCTCGCATCAT
GATCCTGAGCTCACATTTAACCACAGCTTCATCGAGCAGC
CATCATCCGGCTGGGTAATAGATTCATTCGAAACTGATGA
GGATGGAGAAGCTGTTTACTGCGAACCACCCAGGGAAGAT
GTTCTTACAGAGGCCGGCGGAGAGCTTCAGGAGCTGAATT
CCAAGTGTAACTTCTTCCCTGACCCATCAACCTTCAGCAG
CGAGGACATGTCACAAGCTTTTGGCATCCCCCGTACCTCC
AGCATCGCCAAATCCAAACGCCCTTCAGTGTCATTCGCAG
AGGGTACAAAGTTCAGCCCAAAAGAGCGTCGCAGTTCAAC
TCAAGATCTGCAAGGGACCGCTCGAAAACCCAAACCCTGG
GGTGTCCTGATGATCTCCGCCCTGCAAGGAGGACAGGGAA
ACCAGAATAACGAAACGGAAACAGAGAAAGAAGAAAAAAA
CGATGAGGAGAACATCTCTGAGGAGCAAAGAGCTTCCTCT
GAAACACTACAAAATGATTCGGAAAGATATAGTTCGGGCC
CACAGAGAACTCACCTCACTGTACCCGGTGGAAGACGACG
CACTCTTTCTAACCCCAAAAAGAACATCCAGTCATCTGAC
GGCGGACAGGACGCAGATTCAGAGAAGTTAACAACAGTAT
ACGTTACTGTAGGTAAGACCTCCAAAATGGTCAAGCAAGA
GCCTCCTTCAGAAGGGCCTGTTCAGGCGATGCTGCGCAGA
CTAGGAAGCCTCCAGAGGCAAAAAGAAGAAGTTGCTAAAG
GCAAGGCCCAATCGATTGTTAAGCCTCCACGGAGGAAACT
AGGTGCCCGAGCCAGTGCATGGGAGCAAGCGAGCGGGTCA
GGCCAATCAGAAGTGGTCATGAGGAAACCCAGTCGTAAAA
AACACAGCTCTCTCAGCTCTCCATGCATAGTCGGGGCAAT
AGACTCTCCTCAAGAGAACAGCGCCCCCAAGAGGCCGCTG
TCCTCCATTTTAAAAAGTGTTCCTGAGAGTGATCCATTTC
AAAGTTTAGAGGTGGAACCGAACAGTGAGGAGACTGGCAT
ACAGACTGAGCACACTTATGAGACTGTGGCTCTGCCTGAC
ACTGTGTCCACCTCTTCAGAGATTATTATTAATGACACAG
TTATGGACCAAGCAGAAAATGAGCCCAATTATGAGAATGT
TTATTTAAAGCATTGATAACACTGCTACATCTTATGCTTT
TAAGAGTGTGTTCACAATTTAATTATTTTGGTTTAACAGA
TTCCGAACCAATAATGAAAAAATATTTGTTGAAGTCAAAA
TGATTAGCCCTCTTGTGAATTTCTTTTTCTTTTTCAATAA
TTTCCTAAACGATGTTTAACAGAGAAAGGAATTTTTTTTT
TTTTACTGTATTTCCTATAATATTTTTTTTTTCTTTTGGA
AAAAGTCTTATTTGTTTTATTTGGCTAGAATAAAAGCAGT
TTTATTTTTAACAAATTATTTTAAGGTCAATATTATTAGC
CTCCTTAAGCAATATTTTTTCCTCGATTGTCTACAGAACA
AACCACTTATGCAATGACTTGCCTAATTAACCTTGTTAAG
CCTTTAAATGTCACTTCAAGCTAAATACTAGTATCTCGAA
AACTATCTAGTAAAATATTATGGACTGTCATTATGGTAAA
GATAAAAGAACTCAGTTACTAGAAATTAGTTATTAAAACT
ATTATGTTTAGAAATGTGTTGAAAACTACATACAGAAAAG
TATATACAAAAAATAATAACTCTAATAATTATTATTTAAA
TTATACTACTAATTCTGACTTCAACTGTATATTTAGCAAC
AGATATAGTTTTAAACACATTCATTCTATGTGTATGCATG
TGAAGACATTTTATCATTTGAGAACTAAATTGTGTAAAGG
CAAAAAAAGACGCACAAATCAAAATCTACTACAAACTTTT
GAGACAAATTTCTGACATCTGTAGGTGAACGAGTAATATT
GTGCCTATGAAGAGAAACATCTGTGAACACACTCTTAAAG
GGCATTACTTTCTTCTTTAACTTGTACTGTATGTTTTAAT
TATATAAACACATCTGCTTAAAAAA

Segment Relationships
Protein Products
No data available
Supporting Sequences
Citations