Transcript

fgfr1a-202

ID
ZDB-TSCRIPT-090929-8414
Name
fgfr1a-202 Nomenclature History
Previous Names
  • fgfr1-004
  • fgfr1a-004
Transcript Type
aberrant processed transcript
Annotation Status
nonsense mediated decay
Annotation Method
Ensembl
Associated With Genes
Strain
TU
Non Reference Strain
Genome Resources
RNA Central
None
Note
None
Sequence
ENSDART00000127119 (1) [ Show ] (double-click sequence to select) [Download]
>tpe|ENSDART00000127119.4|gene_biotype:protein_coding|ENSDARG00000011027.12 transcript_biotype:nonsense_mediated_decay gene_symbol:fgfr1a cdna chromosome:GRCz11:8:51434496:51507179:-1
TGGAGTTCAGATGTAGAGGATCTTTGATAATAATAATGAA
GATGATGATGATAATGAAGACCACGCTGCTGCTGATCTCA
GTACTGTTAACTCAAGCTCTTCAGTCGCAGGGCAGACCAG
CCATCCAAGATGAGGCCCCGGCTGAGCCCACATCGTACAC
TCTGGATTCAGGAGAGAAACTGGAGCTGTCCTGTAAAGCT
AAAGAGGACACACAGAAAGTGACCTGGACCAAGGACCTCG
TTCCACTGGTTGACGGAGAACACACACGCCTGCGCAACGA
TCAGATGGAGATCGAGAAAGTAGAGCCGACCGACTCTGGT
CTGTATGCTTGCTTTGCTCAGGGACTCAACAGCAACCATA
CAGAATACTTCAATATCAGTGTTACAGATGAAGAAGACGA
GGTGGATTCTTCCTCAGAGGAGGCCAAGCTATCAAATGAC
CAAAATCTTCCGATGGCCCCCGTCTGGGCTCAACCTGATA
AGATGGAGAAGAAGCTACATGCGGTTCCTGCCAGTAAAAC
CGTGAAGTTTCGTTGCCAGGCCAATGGAAATCCTACACCG
ACGCTCAAGTGGCTTAAAAACGGCAAAGAGTTTAAGAGAG
ACCAGCGAATAGGAGGCTTCAAGGTACGAGAGCACATGTG
GACCATCATAATGGAGTCAGTGGTGCCGTCAGACAGAGGA
AACTACACCTGCCTGGTGGAAAACAGACACGGCAGCATCA
ATCACACATACCAGCTGGACGTAGTCGAGCGTTCACCGCA
CCGGCCGATCCTCCAGGCCGGGCTGCCTGCAAACCGTACC
GCAGTGGTGGGCAGTGATGTGGAGTTCGAGTGTAAAGTGT
TCAGCGATCCTCAGCCTCACATTCAGTGGCTGAAACACAT
CGAGGTGAACGGCAGCAGATACGGACCTGATGGACTGCCA
TATGTCCGAGCCTTAAAGCCGTTCCCCCGACTCAGCTGCC
CAACCAGACGTACCTGGAGGTGCTGATCTACTGCGTGGGC
TTCTTCCTCATCTGTGTGATGGTGGGGACCGCCGTGCTGG
CCAAAATGCACAGCTCTGCCAAGAAAAGCGACTTCAACAG
CCAGCTGGCCGTCCACAAGCTGGCCAAGAGCATCCCCCTG
CGCAGACAGGTGTCTGTGGACTCCAGCTCATCTATGCATT
CGGGTGGGATGTTGGTCCGTCCATCCCGTCTGTCCTCCAG
TGGCTCCCCAATGCTCTCAGGGGTCTCCGAATACGAGCTT
CCCCAGGACCCACGCTGGGAGGTGCAACGAGACAGGCTGG
TTCTCGGGAAACCTCTTGGCGAAGGCTGCTTTGGACAGGT
GATGATGGCCGAGGCGATGGGGATGGATAAAGAAAAACCC
AATAGAATCACCAAAGTGGCCGTCAAGATGCTCAAATCGG
ATGCCACGGAGAAAGACCTGTCAGACCTGATCTCTGAGAT
GGAGATGATGAAGATTATTGGCAAACACAAGAACATCATC
AACCTGCTGGGAGCCTGCACACAAGACGGTCCGCTGTACG
TCATCGTGGAGTTTGCTGCTAAAGGGAACCTGCGGGAGTA
TCTGCGCGTACGGCGTCCACCAGGGATGGAGTACTGTTAT
AACCCTGACCAGGTGCCAGTGGAGAACATGTCCATTAAAG
ACCTGGTGTCCTGCGCATATCAGGTGGCCCGAGGAATGGA
GTATCTCGCATCCAAGAAGTGTATTCATCGAGACCTGGCT
GCTCGGAATGTGCTGGTGACGGAAGATAACGTTATGAAGA
TCGCAGACTTTGGCCTGGCCAGAGACATCCATCATATTGA
TTACTACAAGAAGACCACCAATGGTCGTTTGCCGGTGAAA
TGGATGGCTCCCGAAGCTCTGTTTGACCGCATATACACCC
ATCAAAGTGACGTCTGGTCTTTTGGGGTGCTGCTGTGGGA
GATCTTCACTCTGGGGGGCTCTCCGTACCCCGGCGTCCCC
GTCGAGGAGCTCTTTAAGCTGCTGAAGGAAGGACACCGCA
TGGACCGACCCTCCACATGCACACATGAGCTGTATATGAT
GATGAGGGATTGTTGGCACGCCGTCCCGTCTCAGAGACCC
ACTTTTAAACAGCTGGTGGAGGATCTGGACCGCACCCTCT
CCATGACGTCCAATCAGGAGTATCTGGACCTGTCCGTATC
TCTGGACCAGTTTTCTCCAAACTTCCCGGACACTCGCAGC
TCCACCTGCTCCTCAGGTGAAGACTCAGTGTTTTCTCATG
ACGCCGGAGCCGATGAGCCCTGTTTGCCCAAATTCCCACC
CCATCCCAACCGAGGAGTGGCCTTTAAAAAGCGCTGAGGA
CTCATTTACTCAGTGTGTGTGTGTGCAGACTTATGAACTC
TGGGAGAAACACATACAGCTG

OTTDART00000025696 (1) [ Show ] (double-click sequence to select) [Download]
>tpe|OTTDART00000025696|OTTDARG00000011735|ZDB-GENE-980526-255 fgfr1a|OTTDARP00000028358 fgfr1a-004 LG_none BX247873.15,CR376860.38 Danio rerio protein_coding KNOWN, 2381 bp
TGGAGTTCAGATGTAGAGGATCTTTGATAATAATAATGAA
GATGATGATGATAATGAAGACCACGCTGCTGCTGATCTCA
GTACTGTTAACTCAAGCTCTTCAGTCGCAGGGCAGACCAG
CCATCCAAGATGAGGCCCCGGCTGAGCCCACATCGTACAC
TCTGGATTCAGGAGAGAAACTGGAGCTGTCCTGTAAAGCT
AAAGAGGACACACAGAAAGTGACCTGGACCAAGGACCTCG
TTCCACTGGTTGACGGAGAACACACACGCCTGCGCAACGA
TCAGATGGAGATCGAGAAAGTAGAGCCGACCGACTCTGGT
CTGTATGCTTGCTTTGCTCAGGGACTCAACAGCAACCATA
CAGAATACTTCAATATCAGTGTTACAGATGAAGAAGACGA
GGTGGATTCTTCCTCAGAGGAGGCCAAGCTATCAAATGAC
CAAAATCTTCCGATGGCCCCCGTCTGGGCTCAACCTGATA
AGATGGAGAAGAAGCTACATGCGGTTCCTGCCAGTAAAAC
CGTGAAGTTTCGTTGCCAGGCCAATGGAAATCCTACACCG
ACGCTCAAGTGGCTTAAAAACGGCAAAGAGTTTAAGAGAG
ACCAGCGAATAGGAGGCTTCAAGGTACGAGAGCACATGTG
GACCATCATAATGGAGTCAGTGGTGCCGTCAGACAGAGGA
AACTACACCTGCCTGGTGGAAAACAGACACGGCAGCATCA
ATCACACATACCAGCTGGACGTAGTCGAGCGTTCACCGCA
CCGGCCGATCCTCCAGGCCGGGCTGCCTGCAAACCGTACC
GCAGTGGTGGGCAGTGATGTGGAGTTCGAGTGTAAAGTGT
TCAGCGATCCTCAGCCTCACATTCAGTGGCTGAAACACAT
CGAGGTGAACGGCAGCAGATACGGACCTGATGGACTGCCA
TATGTCCGAGCCTTAAAGCCGTTCCCCCGACTCAGCTGCC
CAACCAGACGTACCTGGAGGTGCTGATCTACTGCGTGGGC
TTCTTCCTCATCTGTGTGATGGTGGGGACCGCCGTGCTGG
CCAAAATGCACAGCTCTGCCAAGAAAAGCGACTTCAACAG
CCAGCTGGCCGTCCACAAGCTGGCCAAGAGCATCCCCCTG
CGCAGACAGGTGTCTGTGGACTCCAGCTCATCTATGCATT
CGGGTGGGATGTTGGTCCGTCCATCCCGTCTGTCCTCCAG
TGGCTCCCCAATGCTCTCAGGGGTCTCCGAATACGAGCTT
CCCCAGGACCCACGCTGGGAGGTGCAACGAGACAGGCTGG
TTCTCGGGAAACCTCTTGGCGAAGGCTGCTTTGGACAGGT
GATGATGGCCGAGGCGATGGGGATGGATAAAGAAAAACCC
AATAGAATCACCAAAGTGGCCGTCAAGATGCTCAAATCGG
ATGCCACGGAGAAAGACCTGTCAGACCTGATCTCTGAGAT
GGAGATGATGAAGATTATTGGCAAACACAAGAACATCATC
AACCTGCTGGGAGCCTGCACACAAGACGGTCCGCTGTACG
TCATCGTGGAGTTTGCTGCTAAAGGGAACCTGCGGGAGTA
TCTGCGCGTACGGCGTCCACCAGGGATGGAGTACTGTTAT
AACCCTGACCAGGTGCCAGTGGAGAACATGTCCATTAAAG
ACCTGGTGTCCTGCGCATATCAGGTGGCCCGAGGAATGGA
GTATCTCGCATCCAAGAAGTGTATTCATCGAGACCTGGCT
GCTCGGAATGTGCTGGTGACGGAAGATAACGTTATGAAGA
TCGCAGACTTTGGCCTGGCCAGAGACATCCATCATATTGA
TTACTACAAGAAGACCACCAATGGTCGTTTGCCGGTGAAA
TGGATGGCTCCCGAAGCTCTGTTTGACCGCATATACACCC
ATCAAAGTGACGTCTGGTCTTTTGGGGTGCTGCTGTGGGA
GATCTTCACTCTGGGGGGCTCTCCGTACCCCGGCGTCCCC
GTCGAGGAGCTCTTTAAGCTGCTGAAGGAAGGACACCGCA
TGGACCGACCCTCCACATGCACACATGAGCTGTATATGAT
GATGAGGGATTGTTGGCACGCCGTCCCGTCTCAGAGACCC
ACTTTTAAACAGCTGGTGGAGGATCTGGACCGCACCCTCT
CCATGACGTCCAATCAGGAGTATCTGGACCTGTCCGTATC
TCTGGACCAGTTTTCTCCAAACTTCCCGGACACTCGCAGC
TCCACCTGCTCCTCAGGTGAAGACTCAGTGTTTTCTCATG
ACGCCGGAGCCGATGAGCCCTGTTTGCCCAAATTCCCACC
CCATCCCAACCGAGGAGTGGCCTTTAAAAAGCGCTGAGGA
CTCATTTACTCAGTGTGTGTGTGTGCAGACTTATGAACTC
TGGGAGAAACACATACAGCTG

Segment Relationships
Protein Products
No data available
Supporting Sequences
Citations