Transcript

nmt1a-201

ID
ZDB-TSCRIPT-090929-7874
Name
nmt1a-201 Nomenclature History
Previous Names
  • nmt1a-002
Transcript Type
aberrant processed transcript
Annotation Status
nonsense mediated decay
Annotation Method
Ensembl
Associated With Genes
Strain
TU
Non Reference Strain
Genome Resources
RNA Central
None
Note
None
Sequence
ENSDART00000102678 (1) [ Show ] (double-click sequence to select) [Download]
>tpe|ENSDART00000102678.5|gene_biotype:protein_coding|ENSDARG00000052966.7 transcript_biotype:nonsense_mediated_decay gene_symbol:nmt1a cdna chromosome:GRCz11:3:39238096:39259677:-1
ATCCTCACTTCCTGGTTAAACATGGCGGATGAGAATGAGA
CAGCACCGCTGCCAGAGAAAGAAGAGGAGGTAGAAGAGGA
TCATGGACACTGCAGCAATTGTGAAAATGAAGAGCATCAC
TCCGATGACGGGGAGAAGGGCGACACAGGTGCCAAGAAGA
AGAAAAAGAAACAGAAGAAAAAGAACAAGGACAAGTCTGG
AGCAAAAGATGCCGCTCAGGATCCTCTGGCCAAAGTAAAC
TCTCTCCCAGCTGATAAGTTACAGGAGATCCAGAAGGCCA
TTGAGCTGTTCTCGGTGGGACAGGGTCCAGCTAAAACCAT
GGAGGAGGCCACACGTCGCAGTTATCAGTTCTGGGACACT
CAGCCTGTTCCCAAACTTGGTGAGACTGTGACATCACATG
GTTGTATTGAGCCAGATAAAGATAACATTCGAGAGGAGCC
CTACAGCCTCCCGCAAGGCTTTACCTGGGACACTCTCGAC
CTAGGAAACGCTGCAGTGCTGAAAGAGCTATACACACTCC
TGAACGAGAACTACGTGGAGGATGACGACAACATGTTTCG
CTTTGATTACTCTCCTGAATTTCTGCTCTGGGCTCTGCGT
CCTCCAGGCTGGTTGCCTCAGTGGCATTGTGGAGTGAGAG
TGAACTCTAATCAGAAGCTAGTTGGATTCATCAGTGCCAT
TCCAGCCAACATCCGCATCTATGACATAGAAAAGAAGATG
GTGGAGATTAACTTTCTGTGTGTGCATAAGAAACTCCGTG
CGAAACGAGTGGCTCCGGTGCTCATCAGGGAGATCACCAG
ACGGGTCAACTTGGAGGGCATCTTTCAGGCTGTGTACACT
GCTGGGGTGGTACTGCCCAAACCAGTGGGCACCTGTAGAT
ACTGGCACCGTTCTTTGAACCCACGAAAGCTGATTGAGGT
GAAGTTTTCTCACCTTAGTCGCAACATGACTATGCAACGC
ACCATGAAGCTCTACCGGCTGCCAGAGGCTCCCAAGACTG
CAGGTTCAACACTGGCTGCTCCCTCAGGAGAACATCATTG
ACACCTATGTAGTGGAGACTACAGATGGGAAGGTGACTGA
TATCCTGAGTTTCTACACTCTGCCGTCCACCATCATGAAC
CATCCTGTGCACCGCAGTCTGAAGGCGGCATATTCCTTCT
ATAATGTACACACCACCACCCCACTGGTGGACCTGATGGG
AGACGCTCTTATCCTCGCCAAGTCGAAAGGTTTTGATGTC
TTTAATGCACTGGACTTAATGGAGAACAAGACATTTTTGG
AGAAGCTCAAGTTCGGCATTGGAGATGGAAACCTGCAGTA
TTACCTCTACAATTGGAAATGTCCCAGCATGGGTTCAGAA
AAGGTGGGATTGGTTCTGCAGTGATCCGTTCCACCGTCCA
CAAGCTCCGTCTCGTATGACAGCGAGGCTGATCTATGACA
TCACGCACTGACCGCCTGACAGATGCTACCGATGGACTTC
CTGCTTCAGGAAGGAGAATAGAAATCACCGCCCATTTTTT
AAGTTTGAACTCTGACCTGTTTGGACCTGCACTACTGCTG
CCAGAAAGAGAAGATGTGCTCTTCTCCTTCTCTTTTTTTT
CCCCCTCTCTCTCCCTCATTCTTTTACTTTCTCTCTCTTC
TCTCTCTGCGCATGGACCTTAAGCCATTGTATTTACCATC
ACCAGAGATGAGGAACCTTAATCGGTTATGATTGTTAACA
ACAAACGATGCACACAAACAAACACATGCTCATATGTAAC
AATGAACGTGATTTTTTCCCCCCTCTCTATCCAATGGGAG
GTGCTTTTTGCAAAAACATTTCCTCAGTGTTTTCGAAAAA
ACAACATGCAACAATCAAAGACACGTAAAACAGCCAATGA
GATAATAAAAATCCCAAGTGGACATGACAAGGGCTGCTGT
CACTGATTTTCCTGTGCGCATTTTCTCCTTAAACTGTTTG
TTGCCATCAAAGAAAAGCGTCTCTCTTTTGAAAACGTTGA
CCAACTGATGGTGCGGTACTTGGCGAATGAGATTTTTTGG
TTCTGCTTTGCTTTTAATCTGTCCTCTCTAATCAGTTTAT
TGCTTATTTGTCTCTCTAACTGCCTGTGATCCCCATTCAT
GCATTTGCCAACAGAGAAGCTTTGGTGTACATGAGGATGA
AGTGAGAAATATTCACAGTGTTTTGGAAGCCACTGGCAGA
TTGAGGGGGATCACCATAAATTAGCAATAAGGATGGTGTT
TTTTTTTTTTTTTTTTTGAGGAAGCAGATTTCATTGGGGT
GGGAAGGGGGATTGAAATGTGGGGATTTGTGTCGTGGATG
ATCGATTTCGCCTGCTAATAAAGTTGTACGCCTCTGAAGG
ATCTATAGAACATACTGATCATGTTGAAAACATATGCTCT
AACCTTTTATTTATCAAAGGAATTGAAAGCGGATGGATTT
ATCAAAGCAGTACAATTTTAAGAGATATCGGCAGTGCCTA
TTGAATATTGAAAGTTGTGGTTTTCTTGAACGTAGTGTGG
GTAATTTGAAGAAAGACAGGTTGTGGAAAATACAATGAAC
GCAACTGAAAACGGGTCTTTAGGATTTTATGATGGAGTGA
AAGATGTCAACGTGTATTAATTTTTTTTTCTTTTGTGCTA
AATAAAAAGTAGCAGCTGCTGTGAACATC

OTTDART00000025107 (1) [ Show ] (double-click sequence to select) [Download]
>tpe|OTTDART00000025107|OTTDARG00000020170|ZDB-GENE-050522-477 nmt1a|OTTDARP00000038230 nmt1-002 LG_ BX936386.9 Danio rerio protein_coding KNOWN, 2669 bp
ATCCTCACTTCCTGGTTAAACATGGCGGATGAGAATGAGA
CAGCACCGCTGCCAGAGAAAGAAGAGGAGGTAGAAGAGGA
TCATGGACACTGCAGCAATTGTGAAAATGAAGAGCATCAC
TCCGATGACGGGGAGAAGGGCGACACAGGTGCCAAGAAGA
AGAAAAAGAAACAGAAGAAAAAGAACAAGGACAAGTCTGG
AGCAAAAGATGCCGCTCAGGATCCTCTGGCCAAAGTAAAC
TCTCTCCCAGCTGATAAGTTACAGGAGATCCAGAAGGCCA
TTGAGCTGTTCTCGGTGGGACAGGGTCCAGCTAAAACCAT
GGAGGAGGCCACACGTCGCAGTTATCAGTTCTGGGACACT
CAGCCTGTTCCCAAACTTGGTGAGACTGTGACATCACATG
GTTGTATTGAGCCAGATAAAGATAACATTCGAGAGGAGCC
CTACAGCCTCCCGCAAGGCTTTACCTGGGACACTCTCGAC
CTAGGAAACGCTGCAGTGCTGAAAGAGCTATACACACTCC
TGAACGAGAACTACGTGGAGGATGACGACAACATGTTTCG
CTTTGATTACTCTCCTGAATTTCTGCTCTGGGCTCTGCGT
CCTCCAGGCTGGTTGCCTCAGTGGCATTGTGGAGTGAGAG
TGAACTCTAATCAGAAGCTAGTTGGATTCATCAGTGCCAT
TCCAGCCAACATCCGCATCTATGACATAGAAAAGAAGATG
GTGGAGATTAACTTTCTGTGTGTGCATAAGAAACTCCGTG
CGAAACGAGTGGCTCCGGTGCTCATCAGGGAGATCACCAG
ACGGGTCAACTTGGAGGGCATCTTTCAGGCTGTGTACACT
GCTGGGGTGGTACTGCCCAAACCAGTGGGCACCTGTAGAT
ACTGGCACCGTTCTTTGAACCCACGAAAGCTGATTGAGGT
GAAGTTTTCTCACCTTAGTCGCAACATGACTATGCAACGC
ACCATGAAGCTCTACCGGCTGCCAGAGGCTCCCAAGACTG
CAGGTTCAACACTGGCTGCTCCCTCAGGAGAACATCATTG
ACACCTATGTAGTGGAGACTACAGATGGGAAGGTGACTGA
TATCCTGAGTTTCTACACTCTGCCGTCCACCATCATGAAC
CATCCTGTGCACCGCAGTCTGAAGGCGGCATATTCCTTCT
ATAATGTACACACCACCACCCCACTGGTGGACCTGATGGG
AGACGCTCTTATCCTCGCCAAGTCGAAAGGTTTTGATGTC
TTTAATGCACTGGACTTAATGGAGAACAAGACATTTTTGG
AGAAGCTCAAGTTCGGCATTGGAGATGGAAACCTGCAGTA
TTACCTCTACAATTGGAAATGTCCCAGCATGGGTTCAGAA
AAGGTGGGATTGGTTCTGCAGTGATCCGTTCCACCGTCCA
CAAGCTCCGTCTCGTATGACAGCGAGGCTGATCTATGACA
TCACGCACTGACCGCCTGACAGATGCTACCGATGGACTTC
CTGCTTCAGGAAGGAGAATAGAAATCACCGCCCATTTTTT
AAGTTTGAACTCTGACCTGTTTGGACCTGCACTACTGCTG
CCAGAAAGAGAAGATGTGCTCTTCTCCTTCTCTTTTTTTT
CCCCCTCTCTCTCCCTCATTCTTTTACTTTCTCTCTCTTC
TCTCTCTGCGCATGGACCTTAAGCCATTGTATTTACCATC
ACCAGAGATGAGGAACCTTAATCGGTTATGATTGTTAACA
ACAAACGATGCACACAAACAAACACATGCTCATATGTAAC
AATGAACGTGATTTTTTCCCCCCTCTCTATCCAATGGGAG
GTGCTTTTTGCAAAAACATTTCCTCAGTGTTTTCGAAAAA
ACAACATGCAACAATCAAAGACACGTAAAACAGCCAATGA
GATAATAAAAATCCCAAGTGGACATGACAAGGGCTGCTGT
CACTGATTTTCCTGTGCGCATTTTCTCCTTAAACTGTTTG
TTGCCATCAAAGAAAAGCGTCTCTCTTTTGAAAACGTTGA
CCAACTGATGGTGCGGTACTTGGCGAATGAGATTTTTTGG
TTCTGCTTTGCTTTTAATCTGTCCTCTCTAATCAGTTTAT
TGCTTATTTGTCTCTCTAACTGCCTGTGATCCCCATTCAT
GCATTTGCCAACAGAGAAGCTTTGGTGTACATGAGGATGA
AGTGAGAAATATTCACAGTGTTTTGGAAGCCACTGGCAGA
TTGAGGGGGATCACCATAAATTAGCAATAAGGATGGTGTT
TTTTTTTTTTTTTTTTTGAGGAAGCAGATTTCATTGGGGT
GGGAAGGGGGATTGAAATGTGGGGATTTGTGTCGTGGATG
ATCGATTTCGCCTGCTAATAAAGTTGTACGCCTCTGAAGG
ATCTATAGAACATACTGATCATGTTGAAAACATATGCTCT
AACCTTTTATTTATCAAAGGAATTGAAAGCGGATGGATTT
ATCAAAGCAGTACAATTTTAAGAGATATCGGCAGTGCCTA
TTGAATATTGAAAGTTGTGGTTTTCTTGAACGTAGTGTGG
GTAATTTGAAGAAAGACAGGTTGTGGAAAATACAATGAAC
GCAACTGAAAACGGGTCTTTAGGATTTTATGATGGAGTGA
AAGATGTCAACGTGTATTAATTTTTTTTTCTTTTGTGCTA
AATAAAAAGTAGCAGCTGCTGTGAACATC

Segment Relationships
Protein Products
No data available
Supporting Sequences
Citations